Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00281 ATGAACAGCATTGCTATGGGCATTTGTCTGATGAAACGGCAATGGCCATGGCTTCTTTGTGTTCTGCTGCTACACCTTATGATGAAAAAATACGAAGCAATCAGTCCTGATGGTGAGGTTCTTAACAACTTCAGGCTATCAGTTGCTAGCTCAGATGGCGTCCTCTTACAATGGAGACCCGAGGATCCTGATCCATGTAAATGGAATGGAGTGAAGTGCGATCCCAAGACCAAAAGAGTTACACATCTGATTCTATCTCGCCATAAGTTGAGTGGGTCTATATCTCCTGACCTTGGGAAGCTAGAGCATTTAAGGGTTCTCGCTCTTCACAGCAACAACTTCTATGGCACAATTCCATCAGAATTGGGAAACTGCACTGAATTGCAGGGAATCTTTTTACAGGGTAATTACCTTAGTGGAGTGATTCCAAGTGAAATAGGAAATCTCTCACAGCTCCAAAATTTGGACATATCAAGCAACTCGCTTAGTGGGAATATCCCAGCATCACTTGGGAGTAATGTATCTACCAATTTTCTGGTTGGGCCAATACCTGCTGACGGTGTCCTTGCCAATTTTACTGGAAGCTCCTTTGTTGGAAATCGTGGTTTGTGTGGGGTTCAACTCAATTCAACATGTAAAGCTGATGGTTCGCCTGGGACAAATATTCAATCTAATTCTTCAGACCAAAATCAAAATGGAAAGAAGAAATATTCTGGCAGGCTGCTCATCAGTGCATCAGCAACTGTGGGTGCACTACTTTTGGTGGCACTTATGTGCTTCTGGGGTTGTTTTCTTTATAAGAAATTTGGTAAAACTGACAAAATAAGTCTTGCAATGGATGTTAGTGGAGGTGCATCAATTGTCATGTTCCATGGTGACCTACCGTATTCTTCGAAAGACATTATTAAGAAACTTGAAACTTTAAATGAGGAACACATAATAGGGATAGGGGGGTTTGGAACTGTTTACAAGCTTGCAATGGATGATGGGAATGTATTTGCCTTGAAAAGAATAGTAAAGTTGAATGAGGGCTTTGACCGGTTTTTTGAGAGGGAGCTTGAAATTCTTGGTAGCATCAAACACCGTCATCTAGTGAACTTACGTGGATATTGCAATTCACCTACATCAAAGTTGTTAATATATGACTACCTACCTGGTGGTAGTCTTGACGAAGCTCTTCATGAAAGATCCGAGCAACTTGACTGGGATTCACGCTTGAATATAATTATGGGAGCTGCAAAAGGGCTTGCCTACTTGCATCATGATTGTTCACCTAGGATCATACATCGAGACATAAAATCAAGTAACATTTTGCTTGATGGAAATTTGGATGCCCGAGTCTCTGATTTTGGACTAGCCAAACTTTTGGAGGATGAAGAATCCCACATCACCACGATTGTTGCTGGAACGTTTGGTTATCTAGCTCCTGAGTATATGCAAAGTGGTAGAGCAACTGAGAAGACTGATGTCTATAGTTTTGGTGTGTTGACACTTGAAGTGCTAAGTGGAAAGCGGCCGACAGACGCTTCATTCATTGAAAAGGGTCTCAATATTGTTGGCTGGCTGAATTTTCTTATTACTGAAAATAGGCGGAGGGAAATAGTTGATCCGCATTGCGAAGGGATACAGGTTGAGAGCCTTGACGCCTTGCTCTCTGTGGCTATTCAATGCATTTCGTCGAGTCCAGAGGATCGACCAACGATGCACCGAGTTGTACAGTTGCTTGAATCGGAGGTCTTGACTCCATGCCCAAGTGATTTCTATGACTCCGAGTAG 1776 0.4251 MNSIAMGICLMKRQWPWLLCVLLLHLMMKKYEAISPDGEVLNNFRLSVASSDGVLLQWRPEDPDPCKWNGVKCDPKTKRVTHLILSRHKLSGSISPDLGKLEHLRVLALHSNNFYGTIPSELGNCTELQGIFLQGNYLSGVIPSEIGNLSQLQNLDISSNSLSGNIPASLGSNVSTNFLVGPIPADGVLANFTGSSFVGNRGLCGVQLNSTCKADGSPGTNIQSNSSDQNQNGKKKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKTDKISLAMDVSGGASIVMFHGDLPYSSKDIIKKLETLNEEHIIGIGGFGTVYKLAMDDGNVFALKRIVKLNEGFDRFFERELEILGSIKHRHLVNLRGYCNSPTSKLLIYDYLPGGSLDEALHERSEQLDWDSRLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLDARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLTLEVLSGKRPTDASFIEKGLNIVGWLNFLITENRRREIVDPHCEGIQVESLDALLSVAIQCISSSPEDRPTMHRVVQLLESEVLTPCPSDFYDSE 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00281 591 Gene3D Ribonuclease Inhibitor 35 213 IPR032675 -
Arst5g00281 591 ProSitePatterns Protein kinases ATP-binding region signature. 314 340 IPR017441 GO:0005524
Arst5g00281 591 FunFam LRR receptor-like serine/threonine-protein kinase FEI 1 282 383 - -
Arst5g00281 591 SMART serkin_6 308 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00281 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Arst5g00281 591 Gene3D Phosphorylase Kinase; domain 1 281 383 - -
Arst5g00281 591 SUPERFAMILY L domain-like 36 184 - -
Arst5g00281 591 SUPERFAMILY Protein kinase-like (PK-like) 291 575 IPR011009 -
Arst5g00281 591 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 34 189 - -
Arst5g00281 591 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 78 576 - -
Arst5g00281 591 Pfam Protein kinase domain 310 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00281 591 ProSiteProfiles Protein kinase domain profile. 308 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00281 591 Gene3D Transferase(Phosphotransferase) domain 1 384 581 - -
Arst5g00281 591 Pfam Leucine rich repeat 103 162 IPR001611 GO:0005515
Arst5g00281 591 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 384 586 - -
Arst5g00281 591 Pfam Leucine rich repeat N-terminal domain 36 74 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00281 Arst-Chr5 2445899 2454681 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00281 6 584 Receptor kinase-like Gene Family AT2G35620 74.573 0.0 867
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Arst5g00281 Pkinase 2.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00281 - - gmx:100819230 1044.65