Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00267 ATGTCTCTTCTCAGCAGATTCTTCTACAAGCGTCCCCCTGATGGATTACTCGAATTCATCGACCGAGTCTACGTTTTCGATTCGTGTTTTTCCACCGAAGTGTTGCCCGAAGGAATGTACCAGCTGCACCTCCACGAGATCATCACGGAGCTCCATGAGGAGTTTCCAGAATCTTCTTTCCTCGCATTCAACTTCCGCGACGGCGAGAGGCGCAGCCAATTCGCTGAATTTCTCACAGAATACGATGTTGTCGTCATGGATTACCCAAAGCAGTACGAGGGTGTTCCAATTTTGCCCCTTTCTCTTGTTCAGCACTTTCTTAGAGTCTGTGATAGTTGGTTAAACTTAGGGAACCATCAAAATGTGATTTTGTTTCACTGTGAAAGAGGGGGCTGGCCCCTACTTGCATTTCTACTAGCTAGTTTACTTGTCTTTAGGAAAGTTCATAGTGGTGAAAAAAGGGCGCTTGAGATGGTTCATAGGGAGGCACCAAAGGGTTTGTTGCAGCTTTTGTCGCCTTTGAACCCTTTGCCCTCTCAGCTTCGATACATTCAGTATGTGGCGAGGCGGAATATTTCACCGGGGTGGCCACCTCCGGAGCGAGCACTGTCGCTGGATTGTCTCATTTTGAGGGCAATTCCTGGCTTTGATTTGCAGAATGGGTGTAGGCCGATGATTAGGATATTTGGTAGGAACTTGCTCAGCAAGGATGGGCTTTCCACTCAGATGATATATTCAATGCATAAGAAGAAGAAGAGCTTGCGGCATTACCGCCAGGCAGACTGCGATGTGATTAAGATTGATATTCAGTGTTTAGTTCAAGGAGATGTGGTGTTAGAGTGCGTTCATTTGGATTTGGATCCAGAAAGGGAGGTGATGATGTTTCGTGTAATGTTTAATACGGCATTTATTCGGTCCAACATATTGATGCTGAATGCTGATAACTTGGACATTCTTTGGGATTCAAAGGATCGGTATCCAAAAGGCTTCAGGGCTGAGGTTTTGTTTGGAGAGGTAGAAAATGTAAGTCCTCAACGGGCTCCCACAACCATGCTAAATGGTGAGGAGAAAGGTGGATTGCCCATTGAAGCGTTTTCACGGGTTCAAGAACTGTTTAGTGGCGTAGATTGGGTTGATAGTGGTGATGCTGCTGCTGTCTGGCTTCTTAAACAATTAACTGTCCTAAATGATGTCAAAGAGTTTTCAAGATTGCAAGGAAAAGGAAGTTGGTATTCATCGCCTGCTGACTCCGACGAGGAAAATAATGAATCAAGCACTGCTGATAGTTCGGATGAGGCCTTTGATGTTCCCAGGTTGTCTTCTGATACTCCAAAATTATTGACACCTGACATCCCTGATTCAATCCATTTAGCTTTTGAGAATCATGGTGGTAATCATGAAAATCGCGATTCAGCAACACCTGATCAGTCATTGACAGATAATGGACCCTCAATTTGTCATGTTCCAAGCAATGAATATTCTCCTTGTTCATCTCCATCATCACCGTTATCAGTTCCTGCTACACAACCTTTGGTTCCAACTCCAGCACAAGCCCCTCATCCTCCACCTCCACCTCCACCAATGTCTAGTGAACATGATCCAGTAACTTCAGCCCCACCACCACCACCACCTCCTCCACCTCCAATATCTGCAAGGACAGGTTCTGCTCCGCCAACTCCACCTCCACCTCCTCCAATACCTGCAAGAACAGGTTCAGCACCACCACCTCCACCTCCAATACCTGCAAAAACAGGTTCAGCACCACCACCTCCACCTCCACCACCCCAACTACCTGCAAGAGTAGGTTCTGCCCCACCACCTCAACCTCCACCTCCTCCAGCACCAATAAGAACAGGTTCATCCCCATCGCCTCCGCCTCCACCTCCTCCACTGCCTACAAGAACAGGTTCTGCCCCACCACCTCCACCCCCTCTACCACCTGTAAGAGCAATTACTGCCCCACCTGCTCCACCTCCTCCTCCTCCTTCAGCACCTACACCTAGACGAGCAGGTTCAACCCCACCAGCTCCACCTCCACCTCCACCACCTCCAGGACGAGCAAGTTCAACTCCACTACCTGCTCCTCCCCCTCCGCCAGGACCTGTGCGAACAAGTTTAACATCAGCCCCACCACCGCCACCTCCACCCCCTCCAGGGTCTGTACGAAAAGGTCCTGGTCCACCACCTCCACCTCCACCTCCAGGTGTTCGAACAGTTTCAGCCCCACCAGCTGCACCAAAGCCTCCAAATGCTCCTCCTCCCCCAATTGGTCGTAGTGGAACACCTGTACCTCCTCCACCTCCTGCAGGCAGGGCCTCTAGTGTGCCACCACCACCTGGCAAAGGTTCTTTAGCACCAGCAAGTCTTGGAAGAGGCCGAGGTACTGGTGCAACTGTTAATGCACCTAAGAAAACTATGTTGAAGCCCCTTCATTGGGTGAAAGTTGCCCGAGCAGCACAAGGGAGTTTATGGGCTGATTCACAAAAGCAAGATAATGAATCAAGGGCCCCTGAAATAGATATATCAGAACTTGAGAGCCTGTTTTCAGCAGCATCTGCTTCTGATGGGAGCAATGCTAAAGTTGGAGGTCGGCGCGGTTCTAATATCAACAAACCCGAGAAAGTACAACTGATTGACTTGCGTAGAGCATATAATTGTGAAATAATGCTCTCCAAAATCAAAATTCCTTTGCCAGATATGCTTAATGCTGTTCTAGCATTGGATTCTTCTGTTCTGGATATTGATCAGGTTGAGAATCTCATCAAATTCTGTCCCACCAAGGAAGAGATGGAGATGTTGAAGAATTATAAAGGGGACAAGGATATGCTTGGAAAATGTGAACAGTTTTTTATGGAGCTGATGAAGGTTCCACGAGTAGAATCCAAGTTAAGGGTGTTTGCTTTCAAAATCAACTTTTCTTCTCAGGTGAATGATTTGAGGAAAAATTTGAATACAATCAACAATGCTGCTAAAGAGGTGAAAGAATCTGTGAAATTACGCCAGATAATGCAGACTATTCTTACCTTGGGCAATGCCCTGAATCAGGGAACAGCAAGGGGATCAGCAGTTGGATTCAAATTGGATAGCCTTCTCAAGTTATCTGATACTCGTGCAAGAAATAACAAAATGACTTTGATGCATTATTTGTGCAAGCTTCTTGCTGAGAAAATGCCAGAATTGCTAGATTTTGACAAAGATCTTGTCCATTTGGAAGCAGCTTCAAAGATCCAACTGAAAGCATTGGCTGAAGAAATGCAAGCTGTGAGTAAAGGTTTGGAGAAGGTTGAGCAAGAACTCACTGCTTCTGAAAATGATGGTGCCATATCTACAGGATTTCGTAAGGTGTTGAAGAATTTTCTTGATACTGCTGAAGCCGACGTGAGGTCTCTCATATCATTGTATTCTGAAGTGGGAAGAAATGCAGATTCTTTGTCCCAGTACTTTGGGGAGGATCCAGCTAGGTGCCCTTTTGAGCAAGTTACACAAATCCTTGTTGTATTCATGAAAATGTTTAACAAGTCAAGGGAAGAGAATGAGAGGCTGGCAGAAGCTGAAAAGAAGAAATTAGAGAAAGAAGCCATGAAGGAAAAGGCAGCAGCAAATAACACAAACTCCAAAAAAGAAATGGTTAGATAG 3636 0.4634 MSLLSRFFYKRPPDGLLEFIDRVYVFDSCFSTEVLPEGMYQLHLHEIITELHEEFPESSFLAFNFRDGERRSQFAEFLTEYDVVVMDYPKQYEGVPILPLSLVQHFLRVCDSWLNLGNHQNVILFHCERGGWPLLAFLLASLLVFRKVHSGEKRALEMVHREAPKGLLQLLSPLNPLPSQLRYIQYVARRNISPGWPPPERALSLDCLILRAIPGFDLQNGCRPMIRIFGRNLLSKDGLSTQMIYSMHKKKKSLRHYRQADCDVIKIDIQCLVQGDVVLECVHLDLDPEREVMMFRVMFNTAFIRSNILMLNADNLDILWDSKDRYPKGFRAEVLFGEVENVSPQRAPTTMLNGEEKGGLPIEAFSRVQELFSGVDWVDSGDAAAVWLLKQLTVLNDVKEFSRLQGKGSWYSSPADSDEENNESSTADSSDEAFDVPRLSSDTPKLLTPDIPDSIHLAFENHGGNHENRDSATPDQSLTDNGPSICHVPSNEYSPCSSPSSPLSVPATQPLVPTPAQAPHPPPPPPPMSSEHDPVTSAPPPPPPPPPPISARTGSAPPTPPPPPPIPARTGSAPPPPPPIPAKTGSAPPPPPPPPQLPARVGSAPPPQPPPPPAPIRTGSSPSPPPPPPPLPTRTGSAPPPPPPLPPVRAITAPPAPPPPPPSAPTPRRAGSTPPAPPPPPPPPGRASSTPLPAPPPPPGPVRTSLTSAPPPPPPPPPGSVRKGPGPPPPPPPPGVRTVSAPPAAPKPPNAPPPPIGRSGTPVPPPPPAGRASSVPPPPGKGSLAPASLGRGRGTGATVNAPKKTMLKPLHWVKVARAAQGSLWADSQKQDNESRAPEIDISELESLFSAASASDGSNAKVGGRRGSNINKPEKVQLIDLRRAYNCEIMLSKIKIPLPDMLNAVLALDSSVLDIDQVENLIKFCPTKEEMEMLKNYKGDKDMLGKCEQFFMELMKVPRVESKLRVFAFKINFSSQVNDLRKNLNTINNAAKEVKESVKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELTASENDGAISTGFRKVLKNFLDTAEADVRSLISLYSEVGRNADSLSQYFGEDPARCPFEQVTQILVVFMKMFNKSREENERLAEAEKKKLEKEAMKEKAAANNTNSKKEMVR 1211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00267 1211 Coils Coil 1078 1105 - -
Arst5g00267 1211 Gene3D Formin, FH2 domain 797 1182 IPR042201 -
Arst5g00267 1211 PANTHER FORMIN-J 710 1202 - -
Arst5g00267 1211 PANTHER FORMIN-J 710 1202 - -
Arst5g00267 1211 MobiDBLite consensus disorder prediction 1178 1211 - -
Arst5g00267 1211 Gene3D Protein tyrosine phosphatase superfamily 16 191 IPR029021 -
Arst5g00267 1211 FunFam Formin-like protein 796 1183 - -
Arst5g00267 1211 MobiDBLite consensus disorder prediction 470 505 - -
Arst5g00267 1211 Pfam C2 domain of PTEN tumour-suppressor protein 199 337 IPR014020 -
Arst5g00267 1211 Coils Coil 1172 1206 - -
Arst5g00267 1211 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 339 IPR035892 -
Arst5g00267 1211 SUPERFAMILY Formin homology 2 domain (FH2 domain) 872 1199 - -
Arst5g00267 1211 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Arst5g00267 1211 MobiDBLite consensus disorder prediction 408 803 - -
Arst5g00267 1211 Coils Coil 976 996 - -
Arst5g00267 1211 ProSiteProfiles Formin homology-2 (FH2) domain profile. 797 1197 IPR015425 -
Arst5g00267 1211 MobiDBLite consensus disorder prediction 506 783 - -
Arst5g00267 1211 SMART PTEN_C2_2 198 338 IPR014020 -
Arst5g00267 1211 Gene3D - 197 342 - -
Arst5g00267 1211 SMART it6_source 584 1209 IPR015425 -
Arst5g00267 1211 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 187 IPR029021 -
Arst5g00267 1211 Pfam Formin Homology 2 Domain 802 1172 IPR015425 -
Arst5g00267 1211 MobiDBLite consensus disorder prediction 1178 1197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00267 Arst-Chr5 2345479 2353055 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00267 1 435 FH2 protein (formin) Gene Family AT1G31810 77.931 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00267 - - adu:107487096 1039.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00267 5 2345479 2353055 Arst5g00267 5 2345479 2353055 ECH