Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00249 ATGGCTGTTCAACTCACCCCATCGGCGATAACCACAATTTGCTCGAACCATTTCAGTTCGATTGAGAATCTGAAGCCGGTTTTGCAAGTAATCCACGTGAAGCTTTTCCCGTCGCAGGACAGGTACTGCTTGGTGCTCTCCGATGGCTCTCACTACCAGCAGTCTATACTCGCCACCAAGAAGAACCACTTGCTCACTTCCGGCACCTTGCAGACTGGTTCCATCATCGTCCTCACTTTGTTCACCACCTCCGTTATCCAGAACAGCACGATTATCATCATCGTTGATCTAGATGTGATACTTAAGAAATGTAATCCGATTGGAACTCCTGTGTCAGCAAATTTTGACGAATCTTATGCAAATCGAAACATGGGTTTCTGCAATCCTGAATCTCAGGCTTCAATAAGCCCCTTTCAAAATTCATATGTTCATCAACCTCAGCCCATGCATCAACAGCCAATGAAAATGCCCGAGGCAAAGGAAAATTTCACACCATCAGTTTGCTTGGATATTCAAGCTGTCTTGAAGCGGTGTGAAATCGTTGAAAAGGAAGTTCAATCATTAAAAGATTGTTTGTCCCTCATCAACAGGAAGGATTCAGAACAAAGAAAGCAGATAGAAGACCTTCGGAAGCAGAATGCAGAGTTGGCAGGCGAGAAACAGCGACTCCTACAAGCGATTCAAGGAATTTTGTCGGAAAATCGAAGGATCTAA 714 0.444 MAVQLTPSAITTICSNHFSSIENLKPVLQVIHVKLFPSQDRYCLVLSDGSHYQQSILATKKNHLLTSGTLQTGSIIVLTLFTTSVIQNSTIIIIVDLDVILKKCNPIGTPVSANFDESYANRNMGFCNPESQASISPFQNSYVHQPQPMHQQPMKMPEAKENFTPSVCLDIQAVLKRCEIVEKEVQSLKDCLSLINRKDSEQRKQIEDLRKQNAELAGEKQRLLQAIQGILSENRRI 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00249 237 Coils Coil 199 226 - -
Arst5g00249 237 PANTHER PROTEIN CYCLOPS 155 236 IPR040036 GO:0005634|GO:0036377|GO:0043565
Arst5g00249 237 Pfam Replication factor-A protein 1, N-terminal domain 5 100 IPR007199 GO:0003677|GO:0005634|GO:0006260
Arst5g00249 237 SUPERFAMILY Nucleic acid-binding proteins 1 107 IPR012340 -
Arst5g00249 237 FunFam Replication protein A subunit 4 114 - -
Arst5g00249 237 Gene3D - 3 114 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00249 Arst-Chr5 2228281 2231756 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00249 1 134 Core DNA Replication Machinery Family AT4G19130 36.170 4.30e-19 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00249 - K07466 adu:107487113 456.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00249 5 2228281 2231756 Arst5g00249 5 2228281 2231756 ECH