Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00243 ATGGCAACTCATGCTTTGCTTGGAATTCTGATTGGAAACTTGAACACTTTTGTCCAGAATGAGATTGCAGCACTTTCTGGTGTTGACTCGCAGATCCAAGACCTGTCTGAAAATCTCAGTGCAATCCGTGCGTTATTCCAAGATGCGGCAGAGGACCAATTTACAAGCCATGTCATGAAGGACTGGCTGAATAAGCTTTCGGATGCTGCGCATGTGTTGGAAGATATCTTGGAAGATTGTTCAACGGAATCCAACCGTCTTCAAAGTGAAGGGTGGTCAGCCCGCCTCCATCCCAAGACTATTTTGTTTCGTCATGCTATCAGCAAGAGGATGAAAGACATGGTCAAGAGGTTCCAGCGTATTGATGATGATAGGAGAAGGTTTCAGCTGCCTCTGGGAGTCAGACAGAGGCAACAAGAAGATGATGATCTGCGACAAACTACTTCTGCCATCACTGATCAGCACCAGATGTATGGAAGAGATGAAGAAAAAGACAAGATTGTAGGCTTTCTCACAGAGCATGCCAGTAGCACTGATGGCCTCTCTGTGTATCCTGTTGTTGGTATGGGAGGTCTTGGCAAAACAACACTTGCTCGATGGGTCTTCAATGACGACAGGGTGAAACAACATTTTGATTTGAGAATTTGGGTCTGTGTTTCTACAAACTTCAACATGATGAGAATTCTACAGTCCATTGTAGAATCCTCCACCGGAGTGAACCCAAACCTCTCCACTTTAGAAGCAATGCAAAACAAAGTTCAACAAGTGTTACTGGACAAAAGGTGGTTGCTTGTTCTAGACGATGTGTGGGAGAATGACAAATGGGAGGACTTGAAGTCTGTGCTGAATTCTAGAGGTTGTGAAACCAAAGGTGTTTCAATTTTGGTCACAACACGTGATCAGACTGTTGCATCTGCCATGGAAACATGCCCTACTCAATCTCATCACTTACAGCCATTACCTAAGGATGACAATTGGTCATTGTTCACACACTATGCATTTGATCCAAACAAGGAGCAGCCTGCAAAGCTGGTGGAGATTGGTAAGGAAATCGTCAGAAGATGTGTGGGTAATCCCCTTGCATCCAAAGTTGTTGGAAGCCTTTTGCGTAATAAAAGAGAGGAAAAACAATGGCTCGATGTGTTGGAAAGTAAGTTTTGGGACATTGATGCTGTCATGGGTGCTTTGAGACTAAGTTATTTTCATTTGAAGCCATCATCACGGGAATGCTTTTGTTTTTGTGCTCTCTATCCTGAAGATTTTCGAATCTCAAAGGAACAGCTAATTCATCTTTGGATGGCCAACGGACTAACTAAATCCAAAGGGCATTTGGAGGTTGAAGATGTTGGTAACCAGCAATGGGAGGAGCTCCTCCAGAGATCATTTTTTCAAGAAGTATCGACTGACAAGTATGGAAACACCACCTTCAAGATCCATGACTTATTTCTTGATCTTGCCCACTCCATAGTGGGAGAAGAGTATAAAGCTTATGATGAGTCTGCAAGCTTGACCAATTTGTCAAGAAGGGTCCACCATGTAAGTTACTCTGGCTTGCCTGAGTTAAATCAGCATACCTTGAAGAATATTGAGTCCTTGAGGACTTTTATTGATCTTGATCCAACAATTAGCAATCTCTTCGCTGGATCTCCAGCATTGGTTTTGCGTAAAGTGCAGTTATGTAATTCTCTCCGAGCTTTGCGTACAAGATCTTCTGAACTCTCAGCACTGAAAAGTTTAACACATTTGAGGTACTTGAATATTTACAATAGTTACATTACAAAGTTGCCAAAATGTGTTTCTAGGCTGCAGAAATTGCAAATTCTAAAGCTAGAACATTGCTATTTACTTACTTGTCTGTCCAAACACATATTGAAGCTGAAGGATCTCAGGCATCTCTTAATTGATGGATGTCCGTCATTAATAGAAATGCCTCCAAAAATGGGGGAGTTGAAACAACTGAAAACACTGAATATTTTTATTGTGGATTCAAAAGCCAAACATGGCTTAGCAGAGTTACATGATTTACAGCTTGGTGGTAGACTACAGATTAAAGGTCTCGAGAATGTCCAGAGCGAAGATGATGCTACAGAGGCTAATTTGATGAGTAAGAAGGAGCTGAGTTATTTATATTTGTCTTGGAATTCTGATTCTAATTCTAATTCATTATGCATTAGTCCGGAGAGAGTACTTGAAGCCCTTGAGCCTCCCCCTAATCTCAAGAATTTAGGGATTAATGGTTATAGGGGATCACAATTCCCTGGTTGGGTGAGAAATACTAACATCTTTTCAAGCTTAGTTAATGTTATACTCTTTGACTGCAACAACTGTGAGCAGATTCCTCCACTTGGTAAATTACGACATTTAGAAAGTCTTTATGTATGTGGTATGAAAGATGTGAAGTACATTGATGAAGACTCGTATGATGGAGTGGAGGAGAAGGTGGCCTTTAAGTCCCTAAAGGAGCTAACTTTGATAGACTTGCCAAAGTTAGAGAGGATTTTAAGGGACGAAGGAGTAGAGATGCTCCCACTTGTTTCCAAATTAACCATTCCATGCAGCCCCAATTTGAAGTTACCAATCCTTCAATCCGTGGAGGTACTTGAAATTAAAGGATTGAAATCTGACAATGAAGACATGGCTTCCTTTCCGGAAGAAATCTTTCTGAGTATGCGTTATGTTAAACAGCTCACGATTAGTAGCTTTCGCAAACTGAAGGTTTTACCTCAAGAACTGGGCACCCTTAGCTCACTCCAGAAACTGCATATTCATGATTGTGTTGAGCTTGAGTCCTTGGCAGAGAATGTTTTTCAAGGCTTGAGTTCTCTTCGAAGATTGATCATTTCCGATTGTCAAAGACTAAAATCCTTGTCTAGTGTTGTGGAACACCTAACTTGTCTCGAGTCCCTTCGTATCTTGTTTTGCCCAGAATTGACGACTCTGCCAACTAACATGAATAAGCTAACTGCCCTCCATCATGTTTTTATCGAGGGTAGAGTACCAGAAGGTCTTCAATGTATCCCATCCCTCAAATCTCTGACGCTACTTGTAGTCGATTCATTGCCAGAGTGGTTGGGAGATATGACTTCTCTGGAAAGCTTATACATTGGTCGCTCTCCAAGGATAAGGTCACTTCCAAGTAGCTTTCGAAACCTGACAAACTTGCGTTCCCTCACAATTGAGAAATGTGCTGGGCTGGAGCAGCGATGCCAGAGAGAGACAGGGCAAGATTGGCCAAACATTGCTCACGTTCCACACGTTCAGTTGATTCCCACGCTTAACGTGTCCCAAGTTCCATGA 3297 0.4201 MATHALLGILIGNLNTFVQNEIAALSGVDSQIQDLSENLSAIRALFQDAAEDQFTSHVMKDWLNKLSDAAHVLEDILEDCSTESNRLQSEGWSARLHPKTILFRHAISKRMKDMVKRFQRIDDDRRRFQLPLGVRQRQQEDDDLRQTTSAITDQHQMYGRDEEKDKIVGFLTEHASSTDGLSVYPVVGMGGLGKTTLARWVFNDDRVKQHFDLRIWVCVSTNFNMMRILQSIVESSTGVNPNLSTLEAMQNKVQQVLLDKRWLLVLDDVWENDKWEDLKSVLNSRGCETKGVSILVTTRDQTVASAMETCPTQSHHLQPLPKDDNWSLFTHYAFDPNKEQPAKLVEIGKEIVRRCVGNPLASKVVGSLLRNKREEKQWLDVLESKFWDIDAVMGALRLSYFHLKPSSRECFCFCALYPEDFRISKEQLIHLWMANGLTKSKGHLEVEDVGNQQWEELLQRSFFQEVSTDKYGNTTFKIHDLFLDLAHSIVGEEYKAYDESASLTNLSRRVHHVSYSGLPELNQHTLKNIESLRTFIDLDPTISNLFAGSPALVLRKVQLCNSLRALRTRSSELSALKSLTHLRYLNIYNSYITKLPKCVSRLQKLQILKLEHCYLLTCLSKHILKLKDLRHLLIDGCPSLIEMPPKMGELKQLKTLNIFIVDSKAKHGLAELHDLQLGGRLQIKGLENVQSEDDATEANLMSKKELSYLYLSWNSDSNSNSLCISPERVLEALEPPPNLKNLGINGYRGSQFPGWVRNTNIFSSLVNVILFDCNNCEQIPPLGKLRHLESLYVCGMKDVKYIDEDSYDGVEEKVAFKSLKELTLIDLPKLERILRDEGVEMLPLVSKLTIPCSPNLKLPILQSVEVLEIKGLKSDNEDMASFPEEIFLSMRYVKQLTISSFRKLKVLPQELGTLSSLQKLHIHDCVELESLAENVFQGLSSLRRLIISDCQRLKSLSSVVEHLTCLESLRILFCPELTTLPTNMNKLTALHHVFIEGRVPEGLQCIPSLKSLTLLVVDSLPEWLGDMTSLESLYIGRSPRIRSLPSSFRNLTNLRSLTIEKCAGLEQRCQRETGQDWPNIAHVPHVQLIPTLNVSQVP 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00243 1098 FunFam Probable disease resistance protein At1g63360 400 488 - -
Arst5g00243 1098 Pfam Rx N-terminal domain 7 92 IPR041118 -
Arst5g00243 1098 SUPERFAMILY L domain-like 507 931 - -
Arst5g00243 1098 PRINTS Disease resistance protein signature 355 369 - -
Arst5g00243 1098 PRINTS Disease resistance protein signature 183 198 - -
Arst5g00243 1098 PRINTS Disease resistance protein signature 256 270 - -
Arst5g00243 1098 PRINTS Disease resistance protein signature 937 953 - -
Arst5g00243 1098 Pfam NB-ARC domain 161 383 IPR002182 GO:0043531
Arst5g00243 1098 Gene3D Ribonuclease Inhibitor 858 996 IPR032675 -
Arst5g00243 1098 Gene3D - 406 485 IPR036388 -
Arst5g00243 1098 Coils Coil 32 52 - -
Arst5g00243 1098 CDD RX-CC_like 4 117 IPR038005 -
Arst5g00243 1098 Gene3D Ribonuclease Inhibitor 997 1073 IPR032675 -
Arst5g00243 1098 Gene3D - 138 312 IPR027417 -
Arst5g00243 1098 Gene3D - 320 404 IPR042197 -
Arst5g00243 1098 Gene3D - 7 123 - -
Arst5g00243 1098 FunFam Probable disease resistance protein At1g61300 138 311 - -
Arst5g00243 1098 Gene3D Ribonuclease Inhibitor 486 854 IPR032675 -
Arst5g00243 1098 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 414 IPR027417 -
Arst5g00243 1098 SUPERFAMILY RNI-like 842 1067 - -
Arst5g00243 1098 PANTHER DISEASE RESISTANCE PROTEIN RP 64 827 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00243 Arst-Chr5 2198598 2201945 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00243 188 658 WRKY Transcription Factor Family AT5G45050 22.901 2.66e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00243 - - adu:107486996 1745.71