Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00238 ATGGCTGAATCTCTACTTCAAATGGTGATTGAAAACTTGCAAGCTTTCGTTCAGGACGAGCTTGCAACTCTTTGGGGCGTCCACTCGCAGATTCAAGAGCTGTCAGGGAACCTTGCTGCAATCCATGCAGTGCTCCAAGATGCTGAAGAGAAGCAGATCAGAGAGCGTGCTGTGAAGCTTTGGCTGCAGAAGCTTTCAGATGCAGCACACGTGCTTGATGATATCTTAGATGAATGTTCAATAGAGTCCAACCGTCTACACAGTGACCAGTGCTTAACTCGTCTTGATCCTGTGACCATCATGTTTCGTCGGGACATTGGTAAGAGGATGAAAGAGATGGTTGACAGGTTTCGTCAAATTGATGAAGAAAGGAGAAGGTTTGAATTGCGTGGAAGAGTTCCAGAGAGGCAACAAGAAGATGAAGCATGGCGCCAGACATGTTCTGGTATCACTGAGCACAATATCTATGGAAGGGAGCAAGACACAAAAAATATTGTGGAGTTTCTTTCAAGGAGTGCTGATAGCAGTAACGACCTCTCTGTTTATCCAATTGTTGGCATGGGGGGCCTTGGAAAAACAACACTTGTCCGATGGGTTTACAATGACAACAAGGTAATTGAACATTTCGATCTGAGAATTTGGGTTTGTGTTTCCACTGAATTCAATACCATGAGAATTCTAGAGTCCATTGTGGAATCTACAAGTGGACATAACCCGAACCTCTCTACTTTAGAAGCACTGAAAAACAAAGTTCAAGAAATACTGCTAGGCAAAAGGTATTTACTTGTTCTAGACGATATGTGGAGCACGGACAAATGGGAGGACTTGAAGTCTGTTTTGCTTTGCGGAGGTGGAACAAAAGGTGCTGCAGTTTTGGTTACTACCCGAGTTGAGAGTGTTGCATCTGTCATGGGAACATGCCATGCTCATCACTTGTCACCATTATCCGAGGATGACAATTGGTTATTGTTCAAATACCATGCATTTGGATCAGACAAAGTGGAGCGCACAGAGCTTGTGGCAATAGGCAAGAAGATTGTAAAGAAATGTGGTGGTTCCCCTCTTGCATCTAAAGCACTTGGAAGCCTTTTGCACAATAAAAAGGAGGAAATACAGTGGGTGAATGTATTGGAAAGTAAGTTTTGGGACATACTTGAGGATGATTCTATTATTGTACGTGCTTTGAAAATCAGCTACTTCCATTTGAAGTTGTCATTAAGACAATGCTTTGCTTTTTGTGCCATTTTCCCCGAAGATTTTCGAATGGAAAAGGAACAACTTATTCATCTTTGGATGGCCAATGGTTTGATCAAATCCAAAGGGAGGTTGGAGATTGAGGATGTTGGTAATGAGGTTTGGGAGGAATTATGTCAGAGATCATTTTTCCAAGAAGTTGAGATTGATGAATTGGGAAGAACTACATTCAAGATGCATGATTTATTTCATGAACTTGCCCAATCCATAATGGGAGAAGAGTGCAGAGTTTATGATGAGTCTGCAAGCTTGACCAATTTGTCTACAAGGGTCCACCATGTCACTTGTTTAAAACCAGAGAGGAAGGTAAACATGGATCTCTTCAAGAAAGCTGAATCTTTGAGGAGTATGATTAATCTTTATCCATTTCATGATCATCGCAACCTTAATGGGTTGCCACCGTTCAATTCTCTCCGTGCACTACGTACAAATGCTTCTCAACTCTCAGAACTGAAGAGTTTAACGCATTTGAGGTACCTGAATCTGCGTAGCAGCGGTATCACAACACTGCCTGAATGTGTTTCGAGGTTACAAAAATTGCAGATTCTGAAGTTAGAAAGGTGTGAAAATCTTTCTTGTTTGCCCAAACACTTAACACAATTGAAGGATCTTAGACATCTCCTAATTGAACTTTGTCATTCATCAGTAGAGACGCCTCCGAATATCGGCGAGTTGAAATGTTTGAGAACATTGAATCTTTTTGTTGTGGATAAAAAGGAAGGGCATGGGTTATCAGAGTTGCGTGATTTACAGCTTGGAGGCAAACTACACATCAAGGGGCTTGAAAACGTCATAAATGAGGGTGATGCTAGAGATGCTAATTTGAGTGCTAAGAAGAACTTGGAAAACTTATACCTGTCATGGGGCTCCTCTGATTCAAGGGGTGGTGCCAATGCTGAGAGAATACTTGAAGCCCTTGAGCCTCCCTCCAATCTCAAGAGTTTTGGGATGAATGGTTACAGCGGAGTAGAGTTGCCTAGCTGGATGCAAAATACTTCAATTCTTTCCAGCTTAGTTATGGTGATACTCTATGATTGCAAGAACTGCAAGCACCTCCCTCCGCTTGGTAAACTACCACATTTAACCGTTCTTTATGTATCTGGAATGAAAGATGTGAAGTACATCGATGAGGACTCATATGATGGCGTGGATGAGAAGGCATTCAAATCGTTGAAGGACCTGACCTTATCAAAGTTGCCAAACTTGGAAGGGATGGTACGAGATGAAAGAGTAGAAATGCTTCCACTTCTTTCTAGCATAAGGGTCTCATGTGTCCCTAAGATTAAGTTGCCACTCCTTCCATCTCTAGAGCACATTCGGATTGAAGGAACAGGGTCAGACTCTGATCATGGTGATAGTGAAGACATGGCTTTGTCTTTCCCGGAAGCTATTGTGGAGAATATGCATCGTGTTAAGGTCCTCCATATTGAACACTTTCCTACACTCAAGGCATTACCCCATGAACTAGGCAGCCTCAATTCACTACAAGAGTTAGAACTCTACTATTTTGATAGACTCGAGTCTTTTTCAGAGAACGTGGTGCAAGGTTTGGGTTCACTTCGAACTTTGATGATTGGTTGTTGTAAGGAACTGAAATCTTTGTCTGAAGGTGTGAGACATCTAACTTGTCTGGAGCGCCTTGATATCATATACTGTCCAAAGCTGGTGACTCTACCGAGTAGCATGAATCAGCTAGTTTCCCTTCGTCATAGTTACATCAATTCTTGTGATACATTGCCAGAAGGCTTACAACATGTCCCTTCCCTCCAAAGTTTGGATGTGTGTAACATACGTTCAATTCCTGAGTGGTTGGGGGACTTAACTTCTCTTCAAAAGTTACATCTCTACTGTAAGGGGTTAAGGTCACTGCCCAGTAGCTTCCGAAACCTGACAAACTTGCATGAGCTATCTATTGATGGGTGCCATAAGGAGCTGCAGAAGCGATGCACCAGAGTAACAGGACAGGATTGGCAAGCCATTGCTCACATCCCACAATTCAAACTGGTTCCCATTCATGAAGAAACATTTTCTGGTATAAATTCATCCCTTTATTCTGTTTTTACCATTAATTTATGTTTGTGTGAATTAGTATCTCGCCTTTCATAA 3360 0.4208 MAESLLQMVIENLQAFVQDELATLWGVHSQIQELSGNLAAIHAVLQDAEEKQIRERAVKLWLQKLSDAAHVLDDILDECSIESNRLHSDQCLTRLDPVTIMFRRDIGKRMKEMVDRFRQIDEERRRFELRGRVPERQQEDEAWRQTCSGITEHNIYGREQDTKNIVEFLSRSADSSNDLSVYPIVGMGGLGKTTLVRWVYNDNKVIEHFDLRIWVCVSTEFNTMRILESIVESTSGHNPNLSTLEALKNKVQEILLGKRYLLVLDDMWSTDKWEDLKSVLLCGGGTKGAAVLVTTRVESVASVMGTCHAHHLSPLSEDDNWLLFKYHAFGSDKVERTELVAIGKKIVKKCGGSPLASKALGSLLHNKKEEIQWVNVLESKFWDILEDDSIIVRALKISYFHLKLSLRQCFAFCAIFPEDFRMEKEQLIHLWMANGLIKSKGRLEIEDVGNEVWEELCQRSFFQEVEIDELGRTTFKMHDLFHELAQSIMGEECRVYDESASLTNLSTRVHHVTCLKPERKVNMDLFKKAESLRSMINLYPFHDHRNLNGLPPFNSLRALRTNASQLSELKSLTHLRYLNLRSSGITTLPECVSRLQKLQILKLERCENLSCLPKHLTQLKDLRHLLIELCHSSVETPPNIGELKCLRTLNLFVVDKKEGHGLSELRDLQLGGKLHIKGLENVINEGDARDANLSAKKNLENLYLSWGSSDSRGGANAERILEALEPPSNLKSFGMNGYSGVELPSWMQNTSILSSLVMVILYDCKNCKHLPPLGKLPHLTVLYVSGMKDVKYIDEDSYDGVDEKAFKSLKDLTLSKLPNLEGMVRDERVEMLPLLSSIRVSCVPKIKLPLLPSLEHIRIEGTGSDSDHGDSEDMALSFPEAIVENMHRVKVLHIEHFPTLKALPHELGSLNSLQELELYYFDRLESFSENVVQGLGSLRTLMIGCCKELKSLSEGVRHLTCLERLDIIYCPKLVTLPSSMNQLVSLRHSYINSCDTLPEGLQHVPSLQSLDVCNIRSIPEWLGDLTSLQKLHLYCKGLRSLPSSFRNLTNLHELSIDGCHKELQKRCTRVTGQDWQAIAHIPQFKLVPIHEETFSGINSSLYSVFTINLCLCELVSRLS 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00238 1119 Gene3D Ribonuclease Inhibitor 522 864 IPR032675 -
Arst5g00238 1119 Gene3D - 314 403 IPR042197 -
Arst5g00238 1119 SUPERFAMILY L domain-like 476 859 - -
Arst5g00238 1119 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 413 IPR027417 -
Arst5g00238 1119 Gene3D Ribonuclease Inhibitor 869 1108 IPR032675 -
Arst5g00238 1119 Gene3D - 141 309 IPR027417 -
Arst5g00238 1119 Pfam NB-ARC domain 159 378 IPR002182 GO:0043531
Arst5g00238 1119 SMART LRR_typ_2 572 595 IPR003591 -
Arst5g00238 1119 SMART LRR_typ_2 1025 1047 IPR003591 -
Arst5g00238 1119 Gene3D - 6 125 - -
Arst5g00238 1119 FunFam Probable disease resistance protein At1g61300 137 309 - -
Arst5g00238 1119 FunFam Probable disease resistance protein At1g63360 399 487 - -
Arst5g00238 1119 Pfam Rx N-terminal domain 6 88 IPR041118 -
Arst5g00238 1119 SUPERFAMILY RNI-like 809 1061 - -
Arst5g00238 1119 Coils Coil 31 51 - -
Arst5g00238 1119 PRINTS Disease resistance protein signature 181 196 - -
Arst5g00238 1119 PRINTS Disease resistance protein signature 350 364 - -
Arst5g00238 1119 PRINTS Disease resistance protein signature 254 268 - -
Arst5g00238 1119 PRINTS Disease resistance protein signature 593 609 - -
Arst5g00238 1119 PANTHER DISEASE RESISTANCE PROTEIN RP 33 834 IPR044974 GO:0006952
Arst5g00238 1119 CDD RX-CC_like 2 120 IPR038005 -
Arst5g00238 1119 Gene3D - 405 487 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00238 Arst-Chr5 2161868 2195495 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00238 178 786 WRKY Transcription Factor Family AT5G45050 24.474 3.06e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00238 - - adu:127747420 1526.53