Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00236 ATGTGCATAGCATTCAGTCCAATATCTGAGCTTTCATTCGTTCTAGCTTTTCAAATGGCTGAATCTCTACTTCAAATGGTGATTGAAAACTTGCAAGCTTTTGTTCAGGACGAGCTTGCAACTCTTTGGGGCGTCCACTCTCAGATTCAAGAGCTGTCAGGGAACCTTGCTGCAATCCATGCAGTGGTCCAAGATGCTGAAGAGAAGCAGATCAGAGAGCGTGCTGTGAAGCTTTGGCTGCAGAAGCTTTCAGATGCAGCACACGTGCTTGATGATATCTTAGATGAATGTTCAATAGAGTCCAATCGTCTACACAGTGAGCAGTGCTTAACTCGTCTTGATCCTGTGACAATTATGTTTCGTCGGGACATCGGTAAGAGGATGAAAGAGATGGTTGACAGGTTTCGTCAAATTGATGAAGAAAGGAGAAGGTTTGAATTGCGTGGAAGAGTTCCAGAGAGGCAACAAGAAGATGAAGCATGGCGCCAGACATGTTCTGGTATCACTGAGCACAACATCTATGGAAGGGAGCAAGACACAGAAAATATTCTGGAGTTTCTTTCAAGGAGTGCTGATAGCAGTAACGACCTCTCTGTTTATCCAATTGTTGGCATGGGTGGCCTTGGAAAAACAACACTTGTCCGATGGGTTTACAACGACAAGAAGGTAATTGAACATTTCCATATGAGAATTTGGGTTTGTGTTTCCACTGAATTCAATACCATGAGAATTCTAGAGTCCATTGTGGAATCTACAAGTGGACATAACCCGAACCTATCTACTTTAGAAGCACTGAAAAACAAAGTTCAAGAAATACTGCTAGGCAAAAGGTATTTACTTGTTCTAGACGATATGTGGAGCACGGACAAATGGGAGGACTTGAAGTCTGTTTTGCTTTGCGGAGGTGGAACAAAAGGTGCTGCAGTTTTGGTTACTACCCGAGTTGAGAGTGTTGCATCTGTCATGGGAACATGCCCTGCTCATCGCTTGTCACCATTATCGGAGGATGACAATTGGTTATTGTTCAAATACCATGCATTTGGATCAGACAAAGTGGAGCGCACAGAGCTTGTGGCAATAGGCAAGGAGATTGTAAAGAAATGTGGTGGTTCCCCTCTTGCATCTAAAGCACTTGGAAGCCTTTTGCGCAATAAAAAGGAGGAAATACAGTGGGTGAATGTATTGGAGAGTAAGTTTTGGGACATACTTGAGGATGATGCTATTATTGTACGTGCTTTGAAAATCAGCTACTTCAATTTGAAGTTGTCATTAAGACAATGCTTTGCTTTTTGTGCCATTTTCCCCGAAGATTTTCGAATGGAAAAGGAGCAACTTATTCATCTTTGGATTGCCAATGGCTTGATCAAATCCAAAGGGAGGTTGGAGATTGAGGATGTTGGTAATGAGGCTTGGGAGGAATTATGTCAGAGGTCATTTTTCCAAGAAGTTGAGATTGATGAATTGGGAAGAACTACATTCAAGATGCATGATTTATTTCATGAACTTGCCCAATCTATAATGGGAGAAGAGTGCAGAGTTTATGATGAGTCTGCAAGCTTGACCAATTTGTCTACAAGGGTCCACCATGTCACTTGTTTAAAACCAGAGGCGGAGGTAAACATGGATCCCTTCAAGAAAGCTGAGTCCTTGAGGAGTATGATTAATCTTCTTCCATTAGATGATCACAATCTTTGTGGTTTGCCACCATTCAATTCTCTCCGTGCACTACGTACGAATGCTTCTCAACTCTCAGCACTGAAGAGTTTAACGCATTTGAGGTACCTAAATCTGCGTAGGAGCGGTATCACAACACTGCCTGAATGTGTTTCGAGGTTACAAAAATTGCAGATTCTGAAGTTAGAAGACTGTCTAAATCTTTCTTGTTTGCCCAAACACTTAACACAATTGAAGGATCTTAGACATCTCCTAATTGAAGAGTGTCATTCATTAGTAGAGATGCCTTCGAATATCGGCGAGTTGAAATGTTTGAGAACATTGAATCTTTTTATTGTGGATAAAAAGGAAGGGCATGGGTTATCAGAGTTGCGTGATTTACAGCTTGGAGGCAAACTACGCATCAAGGGGCTTGAAAATGTCTTAAATGAGGGTGATGCTAGAGATGCTAATTTGAGTGCTAAGAAGAACTTGGAAAAGTTATACCTGTCATGGGACTCCTCTGATTCAAGGCGTGTTGCCAATGCTGAGAGAATACTTGAAGCCCTTGAGCCTCCCTCCAATCTCAAGAGTTTTGGGATGAATGGTTACAGCGGAGTAGAGTTGCCTAGCTGGATGCAAAATACTTCAATTCTTTCCAGCTTAGTTATGGTGATACTCTATGATTGCAAGAACTGCAAGCACCTTCCTCCGCTGGGTAAATTACCACATTTAACTGTTCTTTATGTATCTGGAATGAAAGATGTGAAGTACATTGATGATGACTCTTATGATGGCGTGAATCAGAAGGCTTTTAAGTCGTTGAAGTACCTG 2487 0.4182 MCIAFSPISELSFVLAFQMAESLLQMVIENLQAFVQDELATLWGVHSQIQELSGNLAAIHAVVQDAEEKQIRERAVKLWLQKLSDAAHVLDDILDECSIESNRLHSEQCLTRLDPVTIMFRRDIGKRMKEMVDRFRQIDEERRRFELRGRVPERQQEDEAWRQTCSGITEHNIYGREQDTENILEFLSRSADSSNDLSVYPIVGMGGLGKTTLVRWVYNDKKVIEHFHMRIWVCVSTEFNTMRILESIVESTSGHNPNLSTLEALKNKVQEILLGKRYLLVLDDMWSTDKWEDLKSVLLCGGGTKGAAVLVTTRVESVASVMGTCPAHRLSPLSEDDNWLLFKYHAFGSDKVERTELVAIGKEIVKKCGGSPLASKALGSLLRNKKEEIQWVNVLESKFWDILEDDAIIVRALKISYFNLKLSLRQCFAFCAIFPEDFRMEKEQLIHLWIANGLIKSKGRLEIEDVGNEAWEELCQRSFFQEVEIDELGRTTFKMHDLFHELAQSIMGEECRVYDESASLTNLSTRVHHVTCLKPEAEVNMDPFKKAESLRSMINLLPLDDHNLCGLPPFNSLRALRTNASQLSALKSLTHLRYLNLRRSGITTLPECVSRLQKLQILKLEDCLNLSCLPKHLTQLKDLRHLLIEECHSLVEMPSNIGELKCLRTLNLFIVDKKEGHGLSELRDLQLGGKLRIKGLENVLNEGDARDANLSAKKNLEKLYLSWDSSDSRRVANAERILEALEPPSNLKSFGMNGYSGVELPSWMQNTSILSSLVMVILYDCKNCKHLPPLGKLPHLTVLYVSGMKDVKYIDDDSYDGVNQKAFKSLKYL 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00236 829 Gene3D - 159 325 IPR027417 -
Arst5g00236 829 PANTHER DISEASE RESISTANCE PROTEIN RP 52 829 IPR044974 GO:0006952
Arst5g00236 829 SUPERFAMILY L domain-like 494 808 - -
Arst5g00236 829 Coils Coil 49 69 - -
Arst5g00236 829 Gene3D - 423 505 IPR036388 -
Arst5g00236 829 Gene3D Ribonuclease Inhibitor 542 829 IPR032675 -
Arst5g00236 829 Gene3D - 24 143 - -
Arst5g00236 829 CDD RX-CC_like 20 138 IPR038005 -
Arst5g00236 829 Gene3D - 332 421 IPR042197 -
Arst5g00236 829 FunFam Probable disease resistance protein At1g61300 155 326 - -
Arst5g00236 829 FunFam Probable disease resistance protein At1g63360 417 505 - -
Arst5g00236 829 Pfam NB-ARC domain 176 396 IPR002182 GO:0043531
Arst5g00236 829 PRINTS Disease resistance protein signature 368 382 - -
Arst5g00236 829 PRINTS Disease resistance protein signature 272 286 - -
Arst5g00236 829 PRINTS Disease resistance protein signature 199 214 - -
Arst5g00236 829 PRINTS Disease resistance protein signature 610 626 - -
Arst5g00236 829 Pfam Rx N-terminal domain 24 108 IPR041118 -
Arst5g00236 829 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 431 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00236 Arst-Chr5 2146309 2149107 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00236 196 803 WRKY Transcription Factor Family AT5G45050 24.548 1.62e-11 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00236 - - adu:127747420 1542.71