Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00230 ATGGCAGATTCAATGTTGAGGGTGGAGCATATTGCAGGAAAAGGAAGAGGCCTTGTAGCCTCACAAGCTCTCAAAGCTGGCCAAGTTATCCTCACTGAACCCCCTCTCATTCTCTATTCTTCTTCCCCTCTTACTTCTTCTTCTTCTTACTGTGATCACTGCTTCAGAACCCTACCTACTACTCTTCTTTCATGTCCTTCTTGTCTCAACCACCATTTCTGCAGCAACAAGTGCCTCTCTACTTCCCTCAATTCCTCTCATTCCTCCACTGTTTGCCAAGCACTCTTATCACTTCAACGTTCACCACTGCTTCAACAACACCATCAAGTGCAAGCGCGTTTTGTTGCTGCTCTTCACAACCTTGCAGTTTCTGAGATCAACACTTTGCTTTCTCTACATGGCACCCCAGATGATTCTATCCTTCAAGATGCAAACTTTCTTCATGATCTAATCTCACCCCTTTTTCCTAACAACAAGCTTAGTGTTGATCTTGTTGCTCAGGCTCTAGCAAAGGACAGGATCAATTCCTTCTGCTTGATGGAGCCTTATAACCCTAATGGACCTCAGAGATCAATTAAGGCATATGGGATATACCCAAAAGCCACAATGTTTAACCATGATTGTGTTCCCAATGCTTGCAGGTTTGATTATATGAACACTACTTATACTAATTCTAATACTAATGACATTGTTATTAGGTTGATTAAGGATGTTGATGAAGGAGAAGAGATTTGCACAAGCTATTTTAGGATTGGGAGGGATTATGCTACAAGGAAGAAGATCTTGATGGAGGATTATGGGTTTGTTTGTAGGTGTGAGAGGTGCAAGGTTGAAGCAAGTTGGAGTAATAATGATGAGAATGAAGATCATGATCATGTGCCACATGTAAGGTTTCTTAAGAAGCATGTTTGTAATATCAAGAATTGTGGTGGCACTTTGGCACCTCTTCCTCCAAAACATGATGCACCGTTTAATAATAATGTTCTTGAGTTTAATTTTTGTGGCAATTTCAAAATCGGTGATGATGATCATGATGTTATATAA 1044 0.4052 MADSMLRVEHIAGKGRGLVASQALKAGQVILTEPPLILYSSSPLTSSSSYCDHCFRTLPTTLLSCPSCLNHHFCSNKCLSTSLNSSHSSTVCQALLSLQRSPLLQQHHQVQARFVAALHNLAVSEINTLLSLHGTPDDSILQDANFLHDLISPLFPNNKLSVDLVAQALAKDRINSFCLMEPYNPNGPQRSIKAYGIYPKATMFNHDCVPNACRFDYMNTTYTNSNTNDIVIRLIKDVDEGEEICTSYFRIGRDYATRKKILMEDYGFVCRCERCKVEASWSNNDENEDHDHVPHVRFLKKHVCNIKNCGGTLAPLPPKHDAPFNNNVLEFNFCGNFKIGDDDHDVI 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00230 347 SUPERFAMILY SET domain 4 270 IPR046341 -
Arst5g00230 347 Pfam SET domain 15 248 IPR001214 GO:0005515
Arst5g00230 347 SMART set_7 4 255 IPR001214 GO:0005515
Arst5g00230 347 Gene3D SET domain 17 276 IPR046341 -
Arst5g00230 347 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 285 342 IPR044238 -
Arst5g00230 347 ProSiteProfiles SET domain profile. 1 249 IPR001214 GO:0005515
Arst5g00230 347 CDD SET_SMYD 175 275 - -
Arst5g00230 347 Gene3D - 103 176 - -
Arst5g00230 347 Gene3D - 50 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00230 Arst-Chr5 2087619 2088770 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Arst5g00230 SET 2.3e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00230 - - gmx:100808530 432.18