Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00229 GCCCTCATCTTCAAGTACCTCAAAGCAGGACTCACCGTTCCACCGGACCTCCTCGTACCTATTCGGAGGAGCCTCCAGTTGATGTCTCAGAAGCTCTCACATCACTACCCATCTCTGGGGTTTTATGGGAAGAAGATAGATCCGGAGCCAGGGAGGTGCAGGAGGACCGATGGGAAGAAATGGAGGTGCTCCAGGGAAGCACACCCTGACTCTAAGTACTGCGACCGCCACATGATACGGCGTCGTTACCGTTCAAGAAAGCCTGTGGAATCATCAACTTCATCTCAGCAACAATCTCACTCTTCTGCTGCTGCTTCTGCTGCTACTGCTGCTTCTACTACCACCACCACTACTACTACTGCTGCTGCTTCTGCTGCTAGTACTGGTGGTGGTGGTGGTGGTGGTGGTGGTGCTTCTGGTTCCGGTGGAGCCTTCCACACACTCCCTTTGCACACCAATGGTACCCGTGAAGGTTTCACCCTTGGGAGCAGCAATAGTAGCAGCTTGCAAAACTTGCACATGGACCACCCTTTGTCACTTCCCAGTGAGGTTAGCAAGAAGGAGTACAGGTTTGCACTGAACTCCGATGTAGACGAGCACAACTTCTTGCAGAAAGATCTGGGAACTGTGAGATATCAAGGTTATGACTTCACCTCAGATGGCCTGTGGTCCATGCCCCACATCCCATCAAACACTGTTTCAGAATCAAGAACTGGTTCTACCATGGTTGGAGACTGCTTCCAACAGCAAACAATTCGCGATGCTGATCTCTTAAACCTCAATGCTTCAGGGTCGAAGGAGCTCGTCTTTGGTAGCCAATTGAGTCCGTCGTCGTCTGGGTCTTTGAAACAGGAATATCAGTCCCCGCAGTCACTCTTCACTGACTGGCACTGGAAGAAGGATTTAGGCTCTGACGCCATTTATCGGCCCCACAAAGATTTCAATTCAGATGCAAATGTTGATTGCAATGGTTCTTTGTAA 981 0.5046 MSVPPPHPPLPTAASMTWQAAPFTVAQWQELEHQALIFKYLKAGLTVPPDLLVPIRRSLQLMSQKLSHHYPSLGFYGKKIDPEPGRCRRTDGKKWRCSREAHPDSKYCDRHMIRRRYRSRKPVESSTSSQQQSHSSAAASAATAASTTTTTTTTAAASAASTGGGGGGGGGASGSGGAFHTLPLHTNGTREGFTLGSSNSSSLQNLHMDHPLSLPSEVSKKEYRFALNSDVDEHNFLQKDLGTVRYQGYDFTSDGLWSMPHIPSNTVSESRTGSTMVGDCFQQQTIRDADLLNLNASGSKELVFGSQLSPSSSGSLKQEYQSPQSLFTDWHWKKDLGSDAIYRPHKDFNSDANVDCNGSL 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00229 360 MobiDBLite consensus disorder prediction 81 208 - -
Arst5g00229 360 ProSiteProfiles WRC domain profile. 81 125 IPR014977 -
Arst5g00229 360 ProSiteProfiles QLQ domain profile. 22 57 IPR014978 GO:0005524|GO:0005634|GO:0006355
Arst5g00229 360 PANTHER GROWTH-REGULATING FACTOR 5 19 237 IPR031137 GO:0005634|GO:0006351|GO:0032502
Arst5g00229 360 MobiDBLite consensus disorder prediction 81 111 - -
Arst5g00229 360 Pfam WRC 82 124 IPR014977 -
Arst5g00229 360 Pfam QLQ 22 56 IPR014978 GO:0005524|GO:0005634|GO:0006355
Arst5g00229 360 SMART QLQ_2 21 57 IPR014978 GO:0005524|GO:0005634|GO:0006355
Arst5g00229 360 MobiDBLite consensus disorder prediction 187 208 - -
Arst5g00229 360 MobiDBLite consensus disorder prediction 123 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00229 Arst-Chr5 2078063 2081575 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00229 22 126 GRF Transcription Factor Family AT3G13960 60.177 5.06e-39 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Arst5g00229 WRC 2.1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00229 - - ahf:112747495 616.305