Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00186 ATGCAAGACACAAAACTATCAACTGGATTTCTAGGAATCATTGACTCATTGCTATTGATGGAGAAAGGCACTGCAGCCATAATTGGTCCACAATACTCAGTAATGGCACATGTAATCTCACACATTGCAAATGAGATGCAAGTTCCTCTCTTATCATTTGCAGCAACAGATCCTACACTCACTTCTCTTCAATTTCCATATTTTGTTAGAACAACACAGAGTGATCTTTATCAAATGTCTGCAGTAGCAGATGTTATTGATCAATTCCAATGGAGAGATGTGATTGCAATCTTCATTGATGATGATCATGGAAGAAATGGGGTTGCTGCATTAGGTGATAAGCTTGCCGAAAAACGTTGCAAGATATCACACAAAGCAGCCCTTAAGCCTGATGATAGCAATGTCAACAAGGAAGAAATCAATAGTGCATTAGTTAAAATTGCTTTAATGGAGTCTAGGGTTATAGTTCTTCACATTTACCCTTCTTTTGGCCTTGAAGTTCTTCATATTGCACAATCATTAGGCATGATGGGAAGTGGTTATGTGTGGATAGTCACTGATTGGCTCACAACTGCTCTTGATTCTGATCCATCATTGGCCACAACTTCAATCATGAATGATATGCAAGGTGTTATCACCTTGAGAATGTACACACCAGATTCAAGAATCAAGAGCAATTTTGAGTCTAGGTGGCCCAAACTAGCTCATCAAAATAATGATGAGGGTCCTTTTGGATTGAACATCTTTGGTTTATATGCTTATGACACTGTTTGGACCTTAGCTTATGCACTTGATGCATTCTTTAGAAGTGGTGGAACTTTGAAATTTTCAAATGATTCAAGTCTAAACACTTTAAGGGGTGATGGTGATACCCTTCATCTTGATACAATGGGAATAATGTTTCTAAATGGTAGCATGTTGCTTCAGAAGATTCTAGAAGTTAATCGAACGGGTTTAACAGGTCAAATGATGTTTTCTCAAGGTGGAAACCTAATGAATCCATCATATGAGATCATTAATGTGATTGGAACTGGGGTTAGGAGGATTGGATTTTGGTCTAATGCTTCTGGCCTTCACACTGGTGAACAAGTTCCAAACCATGCAAATTCAAGTGAAGGGCTTTATGGTGTGATATGGCCTGGCCAAACAACACAAACACCTAGAGGTTGGGTTTTTGCCAACAATGGAAAACAACTGAGAATTGGGGTGCCACTTAGGGTTAGCTACCATGAATTTGTGTCAAGAACTAAAGGCACTGACAAGTTTAGTGGTTATTGCATTGATGTGTTCACAGCTGCATTGGAATTGTTGCCTTATCCAGTCCCAAATAAGTTTATTCCATTTGGTGATGGTAAAACCAATCCATTGAATTCACTACTTCTTCAGAGGGTCACACTTGGTGAGTTTGATGCTGTGGTGGGGGACATTACCATTACCACAAACAGAACTAAAATTGTGGATTTCACACAACCATATATTGAATCCGGTTTAGTTGTTGTGGCACCAATAAGGAAGATGAAATCTAATGCTTGGGCCTTTCTAAGACCATTTACTCCAATGATGTGGCTTGTCACAGGAATGTTTTTCTTAGCTGTTGGGGCTGTTGTTTGGATTTTAGAACGTCGCTTGAATGATGATTTTAGAGGCACTCCTAGGAGACAATTTGTCACCATTATATGGTTTAGCTTCTCAACCTTGTTCTTTGCACATAGAGAGAAAACTGTTAGCACTCTTGGCCGATTAGTCTTAATCATATGGCTCTTTGTGGTTTTAATACTGAATTCAAGCTACATTGCAAGCCTAACATCAATCCTCACAGTAGAACAACTCTCTTCCCCAATTAAGGGGATTGAAAGCTTAGCAACAAGCAATGAACGAATTGGTTACTTGAGAGGATCATTTACCGAGAATTATCTAACAGATGAACTCAACATACATAGGTCAAGGCTTGTTCCTCTCAATAACCCTTCAGAATATGAGAAGGCGTTGAAGGATGGAGCTGCTAATGGTGGTGTTGCTGCAATCATAGATGAACGTGCATACATGGAGTTGTTCCTAGCAACTAGGTGTGAATTTGGGATTGTTGGTCAAGAGTTTACCAAGATGGGATGGGGCTTTGCCTTTCCAAGAGACTCTCCCTTAGCAATTGACATGTCAACAGCTATTCTAAAACTATCAGAGAATGGTGATCTTCAAAGGATTCATGACAAATGGCTAACAAAAAGTGCTTGTAGCTCAGAAGGTGCAAAACAAGGCATTGATAGGCTTGAGACTAAGAGCTTTTGGGGCCTCTTCCTTCTTATTGGCATTGCATGCTTCATTGCTCTCCTTTGCCATGTTATTAGAATGACCTACCGTTTTAATAGGCATTATTCAAACAACACTATTAGTAATGACAACCTTGGAGGCTCATCATCATCTTCTTCTTCTTGTTCTTCTCGTATCAAATCTTTCTTTTCATTTGTCAATGGAAGAGAAGAGGAAAAAGAGATGGAAGATAAAAATGGGAAAAAGAGAAGGCGCAAAGATAATAGAGTGGCTCATGAAGTAGAGGTTTCACCATTGCATGAATCAAACATGGAAGCTGAATTAAACATGATAAAAAATGAAACAGAAGATTATGTAAATAGATGTTCAGCTGAAGCAAAGCAAATGTTGGAGGATGTCCACGTAGCAAGTCATGACCTGGACATTATGGAAAGAGAGGCAGCTGAGGTTCTAAAGGCTACCCAATTGAATTTGCAGGAAGCAGTTAAGCAAAGTAAAGAAAAAGTACAAATGCGTTAG 2787 0.3915 MQDTKLSTGFLGIIDSLLLMEKGTAAIIGPQYSVMAHVISHIANEMQVPLLSFAATDPTLTSLQFPYFVRTTQSDLYQMSAVADVIDQFQWRDVIAIFIDDDHGRNGVAALGDKLAEKRCKISHKAALKPDDSNVNKEEINSALVKIALMESRVIVLHIYPSFGLEVLHIAQSLGMMGSGYVWIVTDWLTTALDSDPSLATTSIMNDMQGVITLRMYTPDSRIKSNFESRWPKLAHQNNDEGPFGLNIFGLYAYDTVWTLAYALDAFFRSGGTLKFSNDSSLNTLRGDGDTLHLDTMGIMFLNGSMLLQKILEVNRTGLTGQMMFSQGGNLMNPSYEIINVIGTGVRRIGFWSNASGLHTGEQVPNHANSSEGLYGVIWPGQTTQTPRGWVFANNGKQLRIGVPLRVSYHEFVSRTKGTDKFSGYCIDVFTAALELLPYPVPNKFIPFGDGKTNPLNSLLLQRVTLGEFDAVVGDITITTNRTKIVDFTQPYIESGLVVVAPIRKMKSNAWAFLRPFTPMMWLVTGMFFLAVGAVVWILERRLNDDFRGTPRRQFVTIIWFSFSTLFFAHREKTVSTLGRLVLIIWLFVVLILNSSYIASLTSILTVEQLSSPIKGIESLATSNERIGYLRGSFTENYLTDELNIHRSRLVPLNNPSEYEKALKDGAANGGVAAIIDERAYMELFLATRCEFGIVGQEFTKMGWGFAFPRDSPLAIDMSTAILKLSENGDLQRIHDKWLTKSACSSEGAKQGIDRLETKSFWGLFLLIGIACFIALLCHVIRMTYRFNRHYSNNTISNDNLGGSSSSSSSCSSRIKSFFSFVNGREEEKEMEDKNGKKRRRKDNRVAHEVEVSPLHESNMEAELNMIKNETEDYVNRCSAEAKQMLEDVHVASHDLDIMEREAAEVLKATQLNLQEAVKQSKEKVQMR 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00186 928 Gene3D - 2 333 - -
Arst5g00186 928 FunFam Glutamate receptor 636 743 - -
Arst5g00186 928 FunFam Glutamate receptor 510 640 - -
Arst5g00186 928 FunFam Glutamate receptor 74 233 - -
Arst5g00186 928 PIRSF IGluLR_plant 1 868 IPR017103 -
Arst5g00186 928 PIRSF IGluLR_plant 1 868 IPR017103 -
Arst5g00186 928 SUPERFAMILY Periplasmic binding protein-like II 375 742 - -
Arst5g00186 928 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 18 825 IPR015683 -
Arst5g00186 928 Gene3D - 389 508 - -
Arst5g00186 928 Gene3D - 509 644 - -
Arst5g00186 928 SMART GluR_14 400 741 IPR001320 GO:0015276|GO:0016020
Arst5g00186 928 FunFam Glutamate receptor 394 510 - -
Arst5g00186 928 Pfam Receptor family ligand binding region 17 343 IPR001828 -
Arst5g00186 928 Pfam Bacterial extracellular solute-binding proteins, family 3 411 740 IPR001638 -
Arst5g00186 928 Gene3D - 655 746 - -
Arst5g00186 928 PRINTS Metabotropic glutamate GPCR signature 78 94 IPR000337 GO:0004930|GO:0007186|GO:0016020
Arst5g00186 928 PRINTS Metabotropic glutamate GPCR signature 27 53 IPR000337 GO:0004930|GO:0007186|GO:0016020
Arst5g00186 928 PRINTS Metabotropic glutamate GPCR signature 59 78 IPR000337 GO:0004930|GO:0007186|GO:0016020
Arst5g00186 928 PRINTS Metabotropic glutamate GPCR signature 94 111 IPR000337 GO:0004930|GO:0007186|GO:0016020
Arst5g00186 928 SUPERFAMILY Periplasmic binding protein-like I 19 390 IPR028082 -
Arst5g00186 928 Gene3D - 74 358 - -
Arst5g00186 928 CDD GluR_Plant 397 739 - -
Arst5g00186 928 Pfam Ligand-gated ion channel 741 772 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00186 Arst-Chr5 1734197 1741692 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00186 1 855 Ion Channels AT1G42540 57.388 0.0 1000
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00186 K05387 - gmx:100790502 1373.61