Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00180 ATGGCGGCACCCACAAAACAAGACGAGCAAGAAGCTCTACGCCTCAAGTCCCTGGCGGACTCCAACTTCGCTTCCTCCACAGACCTCAACGCCGCCTTCAACTACGCCAAGCGCGCCCACCGCCTCGCCCCAAATCTTCCCGGCGTCACCGAGACCCTCGCCGCCCTCACCGTTCTCCGCGCCGCCGCCTCTAAGAACTCCCCTTTCCCTGACTGGTACGCCGTCCTCGGTGTTGAGCCCTTCGCCCCCGCCTCCGTCCTCCGCAAGCGCTACAAACAGCTGGCGCTCCTACTCCACCCCGACAAGAGCCCCTACGTGGCATCTGATGAGGCATTCAAGCTCGTCGCCGAGGCCTTCCGATTGCTCTCCGACAGGGCATGGAAGAGGGACTACGATGTCAAGCTCAGGTTGAGGATTCTGGATGAGAAGGAGAAGGAGAATGTTGGTGAAGAGGACAGGGATACATTTTGGACTGCATGCTCCACTTGCAGGCTCTTGCACCAGTTTGAGAGGAAGTACCTGGGACATAATCTGGTATGCCCCTCTTGCAGGAAGAGTTTTAAGGCTGTGGAGGTGGGTAGTGACGATGATGGGTCTGAAGAAGAGGAGGAGGAGAAGGAGGAGGAGGAGGAAGAAGAGGCAGAGAGAGCTAGGAAGGGTAGCGTTGGGAAATTGAAATCAAAAGAGGTGGTGGATGATGATGAGAGATTGGGGGATTTTGTGTCGAGGAGAAAAGCCAAGAGTGTGAAAGGGAAAATGGGCGTTGAAAAAGATGGAGGCTTGAGGAGGAGCCAGGGTTTGAAGGGTGGAAGTGAGGGTGGTAAAGTGAGAAATGAGGATTCTGAGAGCAAAGGAGAGGGTGTTGCGGGAAGCTTGAGAAGTGGGGATTTGAGAACGCGGACTAAAGGGAAAGTAGGTATTGAAAAAGGTGGAGGCTTGATGAAGAGCAGGTGTTTGACGGGTGGAGTTGAGAGTAACGAAGTGGGAAATAAGGTCTTGGAGAGTGAAAGAGAGGGTATTGGAGGAAGCTTGAGAATTGGGGATTTGAGAAAGAGGAAGCGTGGGGAGGTGTTGGACACTTCAAAACCCAAGAGGGTCAAAACTGGGGAGGAAATGATGACATTGGCTGAGTTTCAGTCTGAAGTAAAGCGAACAGCTCGGCAGAAGATGAAGTTGAAACTAAAAGAAAATGGAGAAGATCATGAAACAGAGAGGAGGAGCGAGCGGCGGGAAAGACTTGGTGAGTTGAAAAATAACAAGGATTTAGAGGCTGGGGAATGTAGGAGTATGAAGAAGAGTGTGAAGCCATTAGTCAAGGGGATGAAAGAGGACTCTCTGAAGAAAAAGGAAGTGAGACCTGAGAAGCACGGTGATTCTGGTGGAAGGGACTTGGAGACTTTCACAGTGGTGGATTCGGATTTTTATGATTTTGACAAAGATAGAACTCATAGAAGCTTTAGGAAAGGTCAAATGTGGGCTGTATATGATGATATTGATGGAATGCCAAGGCATTATGCCTTGATTGATGAAGTTTTTTCAGCAAACCCTTTTCAAGTGAGTATAAGTTGGTTTGATCTACAAAACAATGGGGTTGAAAAGATTATTAGTTGTGAGAAAATGGGGTTTCACATGCCTTGTGGAAGATTTAAAATTACCCAGAAGGCTTCCATAAATTCAGTAAATGTATTTTCTCATGTTGTGGACTGTGATCGAGCAGCACGCGAGGTCTACCAAGTTTATCCAAAGAAGGGCTCAGTATGGGCACTTTATGGTAAGGCAACTCTTGATGCAGATGAACAAAATTTTGCAGCCAAGGGTAAGAGATGCTATGACATTGTTGTATTCTTAACAAGTTACAGTGAAATCTCTGGTCTGAGCATGGCATATCTTGAGAAGGTTGATGGTTACAAGACTGTATTTAAGAGACAAGAGAGGGGAAGTCATGCTATTAGATTTCTTGGAAAGGATGACCTGTGGTTAATTTCTCATCAGATTCCTGCTCGAAAATTATCTTGTAACGATACTCCTGAACTTTTGAAAGATTGTTGGGAACTTGATCCTGCTTCACTTCCCTCGGATTTACTTACTATAGGTGGCATAGATAATTGA 2109 0.4751 MAAPTKQDEQEALRLKSLADSNFASSTDLNAAFNYAKRAHRLAPNLPGVTETLAALTVLRAAASKNSPFPDWYAVLGVEPFAPASVLRKRYKQLALLLHPDKSPYVASDEAFKLVAEAFRLLSDRAWKRDYDVKLRLRILDEKEKENVGEEDRDTFWTACSTCRLLHQFERKYLGHNLVCPSCRKSFKAVEVGSDDDGSEEEEEEKEEEEEEEAERARKGSVGKLKSKEVVDDDERLGDFVSRRKAKSVKGKMGVEKDGGLRRSQGLKGGSEGGKVRNEDSESKGEGVAGSLRSGDLRTRTKGKVGIEKGGGLMKSRCLTGGVESNEVGNKVLESEREGIGGSLRIGDLRKRKRGEVLDTSKPKRVKTGEEMMTLAEFQSEVKRTARQKMKLKLKENGEDHETERRSERRERLGELKNNKDLEAGECRSMKKSVKPLVKGMKEDSLKKKEVRPEKHGDSGGRDLETFTVVDSDFYDFDKDRTHRSFRKGQMWAVYDDIDGMPRHYALIDEVFSANPFQVSISWFDLQNNGVEKIISCEKMGFHMPCGRFKITQKASINSVNVFSHVVDCDRAAREVYQVYPKKGSVWALYGKATLDADEQNFAAKGKRCYDIVVFLTSYSEISGLSMAYLEKVDGYKTVFKRQERGSHAIRFLGKDDLWLISHQIPARKLSCNDTPELLKDCWELDPASLPSDLLTIGGIDN 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00180 702 MobiDBLite consensus disorder prediction 248 263 - -
Arst5g00180 702 Coils Coil 375 395 - -
Arst5g00180 702 MobiDBLite consensus disorder prediction 191 225 - -
Arst5g00180 702 SMART dnaj_3 70 127 IPR001623 -
Arst5g00180 702 PRINTS DnaJ domain signature 73 91 IPR001623 -
Arst5g00180 702 PRINTS DnaJ domain signature 91 106 IPR001623 -
Arst5g00180 702 PRINTS DnaJ domain signature 107 127 IPR001623 -
Arst5g00180 702 SUPERFAMILY Chaperone J-domain 63 135 IPR036869 -
Arst5g00180 702 Gene3D DnaJ domain 58 160 IPR036869 -
Arst5g00180 702 ProSiteProfiles dnaJ domain profile. 71 135 IPR001623 -
Arst5g00180 702 MobiDBLite consensus disorder prediction 442 462 - -
Arst5g00180 702 Pfam Domain of unknown function (DUF3444) 466 671 IPR024593 -
Arst5g00180 702 CDD DnaJ 71 124 IPR001623 -
Arst5g00180 702 MobiDBLite consensus disorder prediction 248 319 - -
Arst5g00180 702 PANTHER BNAC03G44070D PROTEIN 8 691 - -
Arst5g00180 702 MobiDBLite consensus disorder prediction 195 211 - -
Arst5g00180 702 Coils Coil 199 220 - -
Arst5g00180 702 MobiDBLite consensus disorder prediction 392 417 - -
Arst5g00180 702 Pfam DnaJ domain 71 132 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00180 Arst-Chr5 1666386 1669300 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00180 8 192 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.995 2.39e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00180 - - aip:107642362 1304.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst1g00389 1 3541019 3542600 Arst5g00180 5 1666386 1669300 PCT