Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00166 ATGGAGTTGTTTCCAGCACAACCAGACTTGTCCTTGCAAATCAGCCCTCCAACAGGGAACGGCACCGCCAAACAACAAGAAGTTGATTTGGGGTTCTGGAAGAGAGCCTTGGACTCTTCTAGAACCTCCTTTTCTTCTTCTTCTTCTCCTTCTCCTTCTTCTTCTCTCCCCAAACCCACATCATACTTCGACCTCTCCCTCTCCAACCCAAGGCCTTCTCCCTCATCACACTACTTCAATAACACCGCCACAACCACCCCCACGAATAATCATAATCTCTTATTTCAATCACTGCAGTACTACCACCACCACCATCCACTGTTACAGCCGCAGCCACAGTCGCAGCCGCACACCCTCAGCCAGGAGCTCGGCTTTCTCAGACCAATTAGAGGGATCCCGGTGTACCAGAACCCACCTTCTTTGCCATTCCCGCAGCACCACCATCACCACCATCATCTTCTAGAACCTTCATCTCCTCCCACCACCGCCAACGCCGGCGCTTCCACTCATCACTTTCAGTCCCAGGCTTTGATGCGGTCGAGATTCTTGTCGCGATTCCCCGCCAAACGGAGCATGAGAGCTCCAAGGATGCGCTGGACTACCACTCTCCATGCTCGCTTTGTTCATGCCGTTGAACTCTTAGGTGGCCATGAAAGGGCTACACCAAAATCAGTTCTTGAACTAATGGATGTCAAGGATCTCACTCTAGCACATGTTAAGTCACATTTACAGATGTACCGGACGGTGAAAACTACAGATAGAGCAGCGGCTTCTTCAGGGCAATCTGATGTATACGATAATAGATCATCGGGTGATACATCTGAAGACATAATGTTTGACATAAACTCACCATCAACAAGGAGGTCTGATCTATCCGTTAAGCAGGGAAGAACAGATAATAATAACAATAACAATCATCTTAATCAAGATAAAGAATATCGTGGCCTTTGGAGTAACTCTTCCAGGGAAGCTTGGTTGCATGGGAAGCCAAAGCTTGATTCTGTTGGGAACAACGTGCATTCCCTTGAGAAGGAAATGGATCCAAAGTGTGTAAGCTATGAGAGAATATCAGATGGAAGCTCATCTTCAAACGTGTCAGCATCAACAAGCCCCAAGAAACCTAATTTGGATTTGGAATTCACATTGGGACAACCACTTTGA 1161 0.4746 MELFPAQPDLSLQISPPTGNGTAKQQEVDLGFWKRALDSSRTSFSSSSSPSPSSSLPKPTSYFDLSLSNPRPSPSSHYFNNTATTTPTNNHNLLFQSLQYYHHHHPLLQPQPQSQPHTLSQELGFLRPIRGIPVYQNPPSLPFPQHHHHHHHLLEPSSPPTTANAGASTHHFQSQALMRSRFLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDVYDNRSSGDTSEDIMFDINSPSTRRSDLSVKQGRTDNNNNNNHLNQDKEYRGLWSNSSREAWLHGKPKLDSVGNNVHSLEKEMDPKCVSYERISDGSSSSNVSASTSPKKPNLDLEFTLGQPL 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00166 386 Gene3D - 194 251 - -
Arst5g00166 386 FunFam Myb family transcription factor 193 251 - -
Arst5g00166 386 MobiDBLite consensus disorder prediction 157 171 - -
Arst5g00166 386 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 8 385 IPR044847 GO:0000976|GO:0006355|GO:0010158
Arst5g00166 386 MobiDBLite consensus disorder prediction 253 311 - -
Arst5g00166 386 MobiDBLite consensus disorder prediction 38 89 - -
Arst5g00166 386 NCBIfam myb-like DNA-binding domain, SHAQKYF class 195 248 IPR006447 GO:0003677
Arst5g00166 386 MobiDBLite consensus disorder prediction 354 386 - -
Arst5g00166 386 MobiDBLite consensus disorder prediction 139 171 - -
Arst5g00166 386 MobiDBLite consensus disorder prediction 355 375 - -
Arst5g00166 386 Pfam Myb-like DNA-binding domain 196 247 IPR001005 -
Arst5g00166 386 MobiDBLite consensus disorder prediction 11 25 - -
Arst5g00166 386 SUPERFAMILY Homeodomain-like 192 248 IPR009057 -
Arst5g00166 386 MobiDBLite consensus disorder prediction 1 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00166 Arst-Chr5 1493213 1498610 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00166 79 385 G2-like Transcription Factor Family AT4G17695 39.264 4.56e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Arst5g00166 Myb_DNA-binding 1.9e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00166 - - aprc:113868756 454.521