Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00165 ATGGTGGAAGGGAGAGTGCGTTTATCCAAGGAAGCTAGAAATGGGTTAGAAATTTTGAAGCGTAAAAGGCTTCAGCGAGCAAAGTCTGTCACTTCAACTGGCACAAGTGTAGCAAACATGATGAACAGAAGTGGAGGAGATGCTCTTAGAGGATTGGCTTCATGTGGTGTGGGATTGCATGGTAATGCAGATGCCTTTTCTAAGCGTAAGGTGGATAAGTTTGACACAAGTAATCTAGATTGGATTGATAAAATTCCAGAGTGTCCTGTGTATTCTCCAACAAAAGATGAATTTGAGGATCCTTTGGTTTATTTGCAAAAGATAGCTCCTGAAGCTTCTAAATATGGTATATGCAAGATTATTTCACCTTTGAGTGCTTCTGTTCCTGCTGGGGTTGTTTTAATGAAGGAGAAAGTAGGCTTCAAGTTTACAACTAGAGTGCAGCCCCTACGCCTTGCTGAATGGGATACTGAGGACAAAGTGACCTTTTTCATGAGTGGAAGAAATTATACATTTAGGGATTTTGAGAAAACGGCAAACAAGGTTTTTACTAGAAGATATTGCAGTGCTGGATGTCTTCCTGCCTCCTACTTGGAAAAAGAGTTCTGGCAAGAAATTGGTTGTGGGAAGATGGAAACAGTTGAATATGCGTGTGATGTTGATGGCAGTGCCTTCTCATCTTCTCCTTCCGATCAGCTTGGTAGCAGCAAGTGGAACTTGAAGAAACTTTCTCGGTTGCCGAAATCTACTTTGCGGCTCTTGGAATCATCTATTCCAGGAGTAACCGAACCCATGTTGTACATTGGAATGCTGTTTAGTATGTTCGCTTGGCACGTTGAGGATCATTATTTGTACAGCATTAATTATCATCACTGTGGGGCATCAAAAACATGGTATGGTATTCCAGGTCATGCAGCATTGGACTTTGAAAGGGTGGTGAGAGAACATGTGTATACTAATGATATTTTGTCAAGTGATGGGGAAGATGGAGCCTTTGATGTTCTCTTGGGGAAAACAACACTATTTCCACCAAATATTTTGCTGGAACATGAAGTCCCCGTTTACAAGGCTGTTCAAAAGCCAGGGGAGTTTGTGATAACCTTCCCTAGGGCATACCATGCTGGATTCAGTCATGGTTTCAACTGCGGAGAAGCTGTGAACTTTGCAATTGGTGATTGGTTTCCTTTAGGAGCTATTGCTAGCCGGAGATATGCACTGCTTAATAGGATTCCTTTGCTTCCCCATGAAGAACTTCTATGCAAAGAAGCAATGCTTCTGTATGCATCCATGGAGCTTGAAGATTCAGACATCTCTATAGGCTTGCTATACCAGCATTCTATTAAGGTTTCTTTTGTTAATTTGATGCGTTTCCAGCATTGTGCCCGTTGGTTACTAATGAAATCAAGAGCATGTATAAGTGTCTCTTCTCATTCCCATGGCGCGATTCTCTGTAGCGTCTGCAAACGCGACTGTTATGTAGCTTTTGTTGACTGCAGCTGTCACCTGCATCCAGTATGCCTACGACATGATATTGAATCCCTCGACTTAACCTGTGGGAGCAAATACACACTTTTTGTGAGGGAGGATATTACAGATATGGAAGCTGCAGCAAAGTTGTTTGAGCAGGAAGATGGGATTCTTCCGCAAACCCAAAGTGACCAAAACATGTATTGCCATCCTTTGTCAAATATGTTTCGGAAAGCTAAGGCAAATGGATACACACCATATTGTGAGCTGAAACTTGATTCTGTTGTTGAATTTTATACAACTCCAGAGCAGACAACAAATAATCAAGAATGTGGTACACAAAGTCAATTTGTTTTCGGACATGGCTTGGAGTATCGAATGCCAGAAGTGCCTGAGGCTGCAACCACTCTTTGTTCTCTTTCAGAACCTCTTGAATCCTCCTCTTCTCTAAAAAATGCTGAGGGGCATGGCAACTTGAAGCTACGAAGTAGTGCTTTTGAAGAGAATGGTGGTGAAAGAACATCGAACAATGCATGTGAATCTTCCCCATCCCCTGCTCAGTATCATGAAAGCTCATGTAAACCACAGCGAGATCTTCATAGATCTGACGTGAAGCCCTTTGTGGATAATAGGAGTGATGATTCTGATTCGGAGATGTTCAGGGTAAAGCGTCCTTCTTCACTGAAAGCAGAGAGGAGAAGTGCAAATGATGCTTTGACTGTGAAGCATTCTGAGCAGCAGGGACTCAAACGATTGAAGAAAGTCCTTCCCGATGGAAGAAGTGCACATTCAATGGATTCAATGAGAAGCAGTGAATCAAGTCAAAAATACAGTCACCCTTTTCATAAAGTTGATGGTGAAATTTCTTCCAGGGACAGATTCACAGGGGCAAACAACAACAATCCCATTTCTGTAAGGTATAAGAAGTTTGGTATCGACGAGATAAGTAGGCAACGAGATCACCACCGGAGAGACAAGCTGCAGCAGACTATCAGGGAACCGCCTTCCATCGAGATCGGACCAAAGCGGCTTAAAGTCCGAGGCCCCTCATTTTTAAGTTTAGAAAGCAGATTGAATTGA 2547 0.4252 MVEGRVRLSKEARNGLEILKRKRLQRAKSVTSTGTSVANMMNRSGGDALRGLASCGVGLHGNADAFSKRKVDKFDTSNLDWIDKIPECPVYSPTKDEFEDPLVYLQKIAPEASKYGICKIISPLSASVPAGVVLMKEKVGFKFTTRVQPLRLAEWDTEDKVTFFMSGRNYTFRDFEKTANKVFTRRYCSAGCLPASYLEKEFWQEIGCGKMETVEYACDVDGSAFSSSPSDQLGSSKWNLKKLSRLPKSTLRLLESSIPGVTEPMLYIGMLFSMFAWHVEDHYLYSINYHHCGASKTWYGIPGHAALDFERVVREHVYTNDILSSDGEDGAFDVLLGKTTLFPPNILLEHEVPVYKAVQKPGEFVITFPRAYHAGFSHGFNCGEAVNFAIGDWFPLGAIASRRYALLNRIPLLPHEELLCKEAMLLYASMELEDSDISIGLLYQHSIKVSFVNLMRFQHCARWLLMKSRACISVSSHSHGAILCSVCKRDCYVAFVDCSCHLHPVCLRHDIESLDLTCGSKYTLFVREDITDMEAAAKLFEQEDGILPQTQSDQNMYCHPLSNMFRKAKANGYTPYCELKLDSVVEFYTTPEQTTNNQECGTQSQFVFGHGLEYRMPEVPEAATTLCSLSEPLESSSSLKNAEGHGNLKLRSSAFEENGGERTSNNACESSPSPAQYHESSCKPQRDLHRSDVKPFVDNRSDDSDSEMFRVKRPSSLKAERRSANDALTVKHSEQQGLKRLKKVLPDGRSAHSMDSMRSSESSQKYSHPFHKVDGEISSRDRFTGANNNNPISVRYKKFGIDEISRQRDHHRRDKLQQTIREPPSIEIGPKRLKVRGPSFLSLESRLN 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00165 848 SMART cupin_9 235 405 IPR003347 -
Arst5g00165 848 PANTHER LYSINE-SPECIFIC DEMETHYLASE 81 761 - -
Arst5g00165 848 ProSiteProfiles JmjC domain profile. 235 405 IPR003347 -
Arst5g00165 848 ProSiteProfiles JmjN domain profile. 88 129 IPR003349 -
Arst5g00165 848 SMART JmjN_1 87 128 IPR003349 -
Arst5g00165 848 Pfam jmjN domain 89 121 IPR003349 -
Arst5g00165 848 MobiDBLite consensus disorder prediction 656 769 - -
Arst5g00165 848 Pfam C5HC2 zinc finger 484 535 IPR004198 -
Arst5g00165 848 MobiDBLite consensus disorder prediction 805 820 - -
Arst5g00165 848 MobiDBLite consensus disorder prediction 657 680 - -
Arst5g00165 848 FunFam Lysine-specific demethylase isoform A 83 432 - -
Arst5g00165 848 Gene3D Cupin 88 439 - -
Arst5g00165 848 MobiDBLite consensus disorder prediction 805 834 - -
Arst5g00165 848 MobiDBLite consensus disorder prediction 682 749 - -
Arst5g00165 848 Pfam JmjC domain, hydroxylase 265 388 IPR003347 -
Arst5g00165 848 SUPERFAMILY Clavaminate synthase-like 240 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00165 Arst-Chr5 1457730 1464366 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00165 56 543 JUMONJI Transcription Factor Family AT2G34880 31.738 2.32e-64 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Arst5g00165 JmjC 2e-39 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00165 - - gmx:100798611 1336.24