Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00153 ATGACATTGGTTATCAGAGAAAGGAGGCACCAACAAGCTCTAAGGCTCTCTTTGCCGCAAAGAAACCCTCCTTCGTTATCGTCGTCGTCGTCGTCATCGTCGTCGTCACCACTTCCACATGCATCAGTATCATTATCAGGATCTTCTTCATCTTCCTCCTCGGTCCTAGTTAACCTCTCAGACCTCGAGAAGCTCGCGGTTCTTGGCCATGGAAACGATGGCATAGTGTACAAGGTTCGACACAAGAAGAGTAATTGCTTCTACGCATTGAAAGTGATACGCTCCAACCCTATAATCGGCATTGATGGAAGCCCTAACCACGTGGAGGCAGAGATTCTGAAGAAGATGGATTCGCCGTACGTAGTGAAGTGTCATGCGGTTTTCGACAACGGTTCTTGCAGTGATAATGGTGTAAGCTTTGTTATGGAGTACATGGGTGGAGGGTCGTTGTATGATATCTTGAAACATCATCGTACACTGTCGGAGGATGTGATCTCTGATGTTGCGAAGCGCGTGTTGGAAGGGCTTAACTATTTGCATGCCATGCACGTTGTGCACAGAGACATTAAGCCCTCGAACTTGCTCGTGAATGAGAAGGGTGAGGTGAAGATAGCGGATTTTGGGGTGAGCCACGTGGTGGTGGAAGAGAAAGAGAGTAATGGCGGTGGTGGTGATTATGATCTTCATCACTATGGCAATGCAGGCACGTGTGCATACATGAGTCCTGAAAGGATTGATCCTGAGAGTTGGAGAGGAGGTGGTGGTGGGGATGGTTTTGCCGGCGATGTTTGGTCGATGGGGGTGGTGGTTTTGGAGTGCTTTCTGGGGCATTTTCCGTTGATCGGGGCGGAGCAGAGACCGGACTGGGCAACACTGATGTGTGCCATTTGCTTTGGGGAAAAGGTGGAGATGCCGGAGACGGCGTCGCCGGAGTTCAAGAGCTTTGTACTGAGGTGTCTTGAGAAGGATTGGAGGAAGAGGGCAACAGTGAAGGAGCTTCTCCAACACCCTTTTGTTAATAGAGGAGGGTGTTGCAATTTCAGTAGAAAAAGGCTTGGTGATTATGTTGTTCTTCAGGGGTGA 1083 0.494 MTLVIRERRHQQALRLSLPQRNPPSLSSSSSSSSSSPLPHASVSLSGSSSSSSSVLVNLSDLEKLAVLGHGNDGIVYKVRHKKSNCFYALKVIRSNPIIGIDGSPNHVEAEILKKMDSPYVVKCHAVFDNGSCSDNGVSFVMEYMGGGSLYDILKHHRTLSEDVISDVAKRVLEGLNYLHAMHVVHRDIKPSNLLVNEKGEVKIADFGVSHVVVEEKESNGGGGDYDLHHYGNAGTCAYMSPERIDPESWRGGGGGDGFAGDVWSMGVVVLECFLGHFPLIGAEQRPDWATLMCAICFGEKVEMPETASPEFKSFVLRCLEKDWRKRATVKELLQHPFVNRGGCCNFSRKRLGDYVVLQG 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00153 360 SUPERFAMILY Protein kinase-like (PK-like) 59 341 IPR011009 -
Arst5g00153 360 ProSiteProfiles Protein kinase domain profile. 62 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00153 360 Gene3D Transferase(Phosphotransferase) domain 1 147 349 - -
Arst5g00153 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Arst5g00153 360 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 21 341 - -
Arst5g00153 360 SMART serkin_6 62 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00153 360 Pfam Protein kinase domain 63 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00153 360 MobiDBLite consensus disorder prediction 15 50 - -
Arst5g00153 360 Gene3D Phosphorylase Kinase; domain 1 41 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00153 Arst-Chr5 1376004 1377095 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00153 1 340 MAP Kinase Kinase Gene Family AT1G32320 52.353 1.83e-109 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Arst5g00153 Pkinase 1.8e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00153 K20604 - adu:107487017 688.337