Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00152 ATGAGTGGAGTGAGTACCAGCGGTGGAGACGATGGCGGTGGCATGCTCGTGCCGGCGCCGGCACCGATGCCGATGCCGATGCCGAGCACGAACACGCCGCCGCCGTTCCTGAGCAAGACGTACGACATGGTAGAGGACCCTTCAACGGACCCGATCGTGTCGTGGAGCGCAACGAACAATAGCTTCGTGGTTTGGAACCCACCGGAATTCGCAAGGGACCTTTTGCCGAAATACTTCAAGCACAACAACTTCTCCAGCTTCGTTAGGCAGTTGAACACTTACGGTTTCAGGAAGGTTGATCCAGATCGCTGGGAATTTGCAAATGAAGGATTTTTGAGGGGTCAAAAGCACTTACTTAGAACTATAACTCGGCGGAAACCTGCCCATGGTCATAGTCATCAACAGGCTCCACAATCACATGGACAGAGTTCAACAGCAGGGGCATGTGTAGAAGTTGGGAAGTTTGGGATTGAGGAAGAGGTTGAGAGACTTAAAAGAGATAAGAACGTCCTCATGCAAGAGCTTGTGAGGTTGCGACAGCAGCAACAGGCCACCGATAGCAAGATGCAGACAATGGCTCAGCGCCTTCATGGAATGGAGCAACGACAACAACAAATGATGTCATTTCTGGCAAAAGCTGTTCAAAGCCCAGGATTCTTTGCTCAGTTTGTGCAACACCAAAGTGAGAACAATAGACGCATAACTGAAGTCAATAAAAAGCGTCGGCTCAGGCCGGAAGGCATTTCCGAAACTGAGCCTGCTACTGTTCCTGCTGGACAAATTGTGAAATATCAGCCTATGATGAATGACCTAGCAAAATCAATGCTAAAGCAAATTATCAAATGGGATGCTTCTCATGCCGATGCTCTAAGTAAAAACTCAGATAATTACTTGATTGCCGATGACACCATGACTTCAACCTGGCCTTCTGGTTCTGGGGTAACACTTCAAGAGGTTCCTCCGGCTTCATTGCAGTCCTCCCACACTCCTGCTGCTACAGGGACTCAAGGACACATCCCATCAGCAGCCATACCTGATATTCCATCTTTACCACAAGTTGCAGCTCCTGAAAAAGTTACAAAGGATGGATCATCTGGGGCACCTTCTATCCATGCTTCTCAAGCAGATGTTATCATGCCTGATCTTCCTTCGATAAATGAGACAGAGACAAGAAGTAATATTCAAATGCCAGAGAAAGGGGACGAGGGATATATGGATCCTAATTCACTAGGAGTTGGTGCGTCATTTCCTATTGATATAGAAGGTTTTTCCCCTGAAATAGACATCGACGATTTCTTATCGAATCCTTCTATCTGGGATGATCTCTTGCAAACTCCAGTGCCCGTGGATATTGAGGAAGATGTTGCCAAAGAGTCCAAGGGTAATGGGGTGGAAACAACAGAAAATGGATGGGACAAAACTCAACGCATGGATCACCTTACTGAGCAGATGGGTCTTCTTTCTTCGGATGTACAAAAGAGAGTTTGA 1488 0.4731 MSGVSTSGGDDGGGMLVPAPAPMPMPMPSTNTPPPFLSKTYDMVEDPSTDPIVSWSATNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLRTITRRKPAHGHSHQQAPQSHGQSSTAGACVEVGKFGIEEEVERLKRDKNVLMQELVRLRQQQQATDSKMQTMAQRLHGMEQRQQQMMSFLAKAVQSPGFFAQFVQHQSENNRRITEVNKKRRLRPEGISETEPATVPAGQIVKYQPMMNDLAKSMLKQIIKWDASHADALSKNSDNYLIADDTMTSTWPSGSGVTLQEVPPASLQSSHTPAATGTQGHIPSAAIPDIPSLPQVAAPEKVTKDGSSGAPSIHASQADVIMPDLPSINETETRSNIQMPEKGDEGYMDPNSLGVGASFPIDIEGFSPEIDIDDFLSNPSIWDDLLQTPVPVDIEEDVAKESKGNGVETTENGWDKTQRMDHLTEQMGLLSSDVQKRV 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00152 495 SUPERFAMILY "Winged helix" DNA-binding domain 32 125 IPR036390 -
Arst5g00152 495 FunFam Heat shock transcription factor 1 29 126 - -
Arst5g00152 495 Pfam HSF-type DNA-binding 36 125 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst5g00152 495 MobiDBLite consensus disorder prediction 312 336 - -
Arst5g00152 495 MobiDBLite consensus disorder prediction 1 21 - -
Arst5g00152 495 MobiDBLite consensus disorder prediction 383 403 - -
Arst5g00152 495 PRINTS Heat shock factor (HSF) domain signature 36 59 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst5g00152 495 PRINTS Heat shock factor (HSF) domain signature 87 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst5g00152 495 PRINTS Heat shock factor (HSF) domain signature 74 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst5g00152 495 Coils Coil 154 181 - -
Arst5g00152 495 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 22 268 IPR027725 -
Arst5g00152 495 SMART hsfneu3 32 125 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst5g00152 495 MobiDBLite consensus disorder prediction 125 145 - -
Arst5g00152 495 MobiDBLite consensus disorder prediction 456 476 - -
Arst5g00152 495 ProSitePatterns HSF-type DNA-binding domain signature. 75 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst5g00152 495 Gene3D - 29 126 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00152 Arst-Chr5 1363118 1366373 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00152 1 488 HSF AT1G32330 50.388 9.99e-157 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Arst5g00152 HSF_DNA-bind 5.2e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00152 K09419 - gmx:100815121 694.501