Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00150 ATGGATGCGAGTACCAGCGGTGGAGATGGCGGTGGCGGAGGAAGCACTAACGGGGCCACGCCGGCGCCGGCGCCGGTACCGATTCCGAACGCGAACGCGCCGCCGCCGTTCCTGAGCAAGACGTACGACATGGTGGACGACCCTTCAACGGACGCAATCGTGTCGTGGAGCGCTACAAACAACAGCTTTGTGGTTTGGAACCCACCGGAATTCGCGAGAGACCTTTTGCCGAAATACTTCAAGCACAACAACTTTTCCAGCTTCGTTAGACAGCTCAACACTTATGGTTTTAGGAAGGTTGATCCAGATCGATGGGAATTTGCAAATGAGGGCTTTTTGAGGGGCCAAAAGCACTTGCTTAGGAATATAACACGAAGAAAACCTGCCCATGGTCATCATCAACAATCTCAGCAATCACATGTACAAAATTCATCAGTAGGGGCATGCGTAGAAGTTGGTAAGTTTGGGCTCGAGGAAGAGGTTGAGAGGCTTAAAAGAGACAAAAATGTGCTCATGCAGGAACTTGTCAGGCTGAAGCAGCAACAACAGACCACTGATGGCCAACTGCAAACAATGGTTCAACGCCTTCAGGGCATGGAGCAAAGACAACAACAAATGATGTCATTCCTTGCTAAAGCCGTACAGAGCCCTGGCTTCTTTGCGCAGTTCGTACAACAGCAAAATGAGAATAATAGGCGTATAAGTGAAGTCAACAAAAAGCGCCGGCTCAAGCAAGAAGGTATTGCTGAAACTGACTCTGCTGCTGCTCCTGATGGGCAAATTGTTAAGTATCAACCTCTGATTAACGATTCAGCAAAAGCAATGCTAAGACAGATCATGAAATGGGATACTTCTCGAGCAGAATCTTTTAGTAAAGACCCTGATAATTACCTGATTGGTGATGGTTCGTCATCCTCATCTGGTGCGATGGACAGTGGCAGCTCCTCAAGCTGGACCTCTGGAGTAACACTTCAGGAGGTCCCGCCAACTTCAGTGCAGTCTTCTCATGTTCCAATTACTCCGGGGGCTCCAGGGCATGTTCCCTCAGCTGCCAAACCTGAAATTCAATCTTTACCACAGGCTGGAGTTCCTGAAAAGGTTACAAGGGTTGGAGCATCTGACATACCTTCTATCCATGTTCCTCAAGCAGATGTCATCATGCCTGATCTTGCACCAATAGATGAAATAGAGTCTGGAAGTATGCTTGGTATTCCGGAAGATAATTATATGGCTCCTGAAGCTGGTGATGAGGGATTTATGGATCCTGATTCATTGGGGGTTAGTGGATCATTTCCCATTGATTTTGAAGGAATTTCACCTGATGCGGACCTTGATGACTTCTTAGGAAATCCATCTATTTGGGATGACCTTTTGCAAACCCCAGTGCAAGAGGATACTGAGACTGATATTGAAGCTTCCAAAGTTAATGAGGTGCAACCAGCCGAAAATGGTTGGGATAAAACTCAACATTTGGATCAACTTACAAAGCAGATGGGTCATCTTTCTTCTGAAGCAAAATAG 1521 0.4701 MDASTSGGDGGGGGSTNGATPAPAPVPIPNANAPPPFLSKTYDMVDDPSTDAIVSWSATNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLRNITRRKPAHGHHQQSQQSHVQNSSVGACVEVGKFGLEEEVERLKRDKNVLMQELVRLKQQQQTTDGQLQTMVQRLQGMEQRQQQMMSFLAKAVQSPGFFAQFVQQQNENNRRISEVNKKRRLKQEGIAETDSAAAPDGQIVKYQPLINDSAKAMLRQIMKWDTSRAESFSKDPDNYLIGDGSSSSSGAMDSGSSSSWTSGVTLQEVPPTSVQSSHVPITPGAPGHVPSAAKPEIQSLPQAGVPEKVTRVGASDIPSIHVPQADVIMPDLAPIDEIESGSMLGIPEDNYMAPEAGDEGFMDPDSLGVSGSFPIDFEGISPDADLDDFLGNPSIWDDLLQTPVQEDTETDIEASKVNEVQPAENGWDKTQHLDQLTKQMGHLSSEAK 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00150 506 FunFam Heat shock transcription factor 1 30 127 - -
Arst5g00150 506 SUPERFAMILY "Winged helix" DNA-binding domain 32 126 IPR036390 -
Arst5g00150 506 Coils Coil 154 181 - -
Arst5g00150 506 Gene3D - 30 127 IPR036388 -
Arst5g00150 506 MobiDBLite consensus disorder prediction 301 338 - -
Arst5g00150 506 SMART hsfneu3 33 126 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst5g00150 506 PRINTS Heat shock factor (HSF) domain signature 88 100 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst5g00150 506 PRINTS Heat shock factor (HSF) domain signature 75 87 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst5g00150 506 PRINTS Heat shock factor (HSF) domain signature 37 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst5g00150 506 Pfam HSF-type DNA-binding 37 126 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst5g00150 506 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 31 285 IPR027725 -
Arst5g00150 506 ProSitePatterns HSF-type DNA-binding domain signature. 76 100 IPR000232 GO:0003700|GO:0006355|GO:0043565
Arst5g00150 506 MobiDBLite consensus disorder prediction 301 351 - -
Arst5g00150 506 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00150 Arst-Chr5 1357682 1361876 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00150 1 505 HSF AT1G32330 52.642 8.06e-172 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Arst5g00150 HSF_DNA-bind 2.9e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00150 K09419 - gmx:100815121 705.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00150 5 1357682 1361876 Arst5g00150 5 1357682 1361876 ECH