Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00135 ATGGCACCCTCATTCGACCACACCGCTCAAACCGTTTGTGTAATGGACGCTTCGGCCCATTTGGGCTTCGCCCTTGTCCACACACTCCTTCATAGGGGCTACACCGTTCATGCCTCCTTTCAAACACAAGGGGAAGATATGTTGAAGGGGATTTCTACTGACCCAAACAAGCTTAAGATATTCCGCTCAGACCCGTTTGATTATCAAAGCATAATGGATTCCCTTAAAGGCTGCTCTGCTTTGTTCTACTCTTTTCAACCTCCTTCTGATCAACCTGATTATGATGAATACATGGCTGACGTGGAGGTAAGGGCTGCACACAACGTGCTTGAAGCTTGTGCACAGACAGAAACCATTGAGAAAGTTGTTTTTACATCCTCGGCCACCGCTGTTGTTTGGAGAGAGGATCGTAAAACCATGGAACTAGACTTGGACGAGAGGCATTGGAGCGATGTCAATTTCTGTCGTAAATTCAAGTTGTGGCATGCAATGTCAAAGACGATGGCAGAGAAGACAGCGTGGGCCCTAGCAATGGACAGAGGGATGAATATGGTGTCAATCAACGCAGGTCTTTTGATGTCCCCTGATCTCTCCATCAGCAACCCTTACCTCAGAGGAGCCGCTGAGATGTACGAGGATGGTGTCTTCGTAACCGTTGATCTTCCTTTTCTCGTCGACGCACACATCTGTGTCTACGAGGATGTCTCATCCTACGGTCGTTATTTGTGCTTCAATCATATTATTAACACCCAAGACGATGCCCTTCGCCTCGCCCGCATCTTGACCCCTGATGCTGCTTCTTCCATGCCTCAAAGAGAGGAGTGTGGGAAGAGTTTTATAGAGCAGAGAATAAGCAACAAGAAGCTGAACAAGTTGATGGTAGACTTTGAGGCTTGA 897 0.476 MAPSFDHTAQTVCVMDASAHLGFALVHTLLHRGYTVHASFQTQGEDMLKGISTDPNKLKIFRSDPFDYQSIMDSLKGCSALFYSFQPPSDQPDYDEYMADVEVRAAHNVLEACAQTETIEKVVFTSSATAVVWREDRKTMELDLDERHWSDVNFCRKFKLWHAMSKTMAEKTAWALAMDRGMNMVSINAGLLMSPDLSISNPYLRGAAEMYEDGVFVTVDLPFLVDAHICVYEDVSSYGRYLCFNHIINTQDDALRLARILTPDAASSMPQREECGKSFIEQRISNKKLNKLMVDFEA 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00135 298 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 259 IPR036291 -
Arst5g00135 298 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 15 172 IPR002225 GO:0003854|GO:0006694|GO:0016616
Arst5g00135 298 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 289 - -
Arst5g00135 298 CDD FR_SDR_e 12 294 - -
Arst5g00135 298 Gene3D - 5 298 - -
Arst5g00135 298 FunFam Cinnamoyl-CoA reductase-like SNL6 isoform A 4 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00135 Arst-Chr5 1134094 1137165 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00135 10 296 Monolignol Biosynthesis Gene Families AT5G58490 30.820 9.85e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00135 - - gmx:100793329 508.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g00135 5 1134094 1137165 Arst5g00135 5 1134094 1137165 ECH