Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00131 ATGGCCTTATTAGAAGATCATCATCATCTTTCATCATCAAATGAGTTTTCCAACTTCGTTGTGTATGATACTATTTCTGCAACCCCTTTTAGCAGCCATGGAAGTTCATCTACTTCTTTCTTGGTAGAAGAAAACAAGGTGGAAGAGTATGGAGAGAGGACAACAACACGAAAACGGCAATCGGGTGAAGCAGGGCAAGGGAAGAAGAAGAGAAGGAGAAAGCCAAGGGTATGCAAGAACAAAGAAGAAGCTGAGAATCAAAGAATGATCCACATTACTGTTGAAAGGAACAGAAGGAAGCTCATGAATGAGCATCTTGCTGTTCTTCGCTCACTCATGCCTGAATCCTATGTCCAAAGGGGTGATCAAGCATCAATAGTAGGTGGAGCTATAGAGTTTGTGAAGGAGCTAGAGCAGCTGTTGCAGTGTCTTGAGGCTCAAAAGTTGAAGCTTGTACATCAAGGAATGGCAGCACAACAATCCAACAAGAATAACAATGAAGATGAGTTGATGATGATGATGATGATGGTGATGGGATCAGCCCCTTTTTCTCATTTCTTTGTGCATCCACAGTTCACTTGGTCTCAGGCTCCAAACAAATATGCTTCCCACCACAACAAGACTAACAATAATAATAATAATAATCAAGCAGCCATGGCTGACATTGAGGTTACTTTGATTGAAACCCATGCAAACCTCAGAATCCTCTCAAGGAAAAGCCCCAAGCAACTTTCAAAGTTGCTTTCTGGTTTTCAGAATCTCTCTCTCACCATTTTGCATCTCAATGTCACCTCCATGGACCCCTTAGTACTCTATTCCATTAGCGCCAAGGTTGAAGAAGAATGCCAACTTGGTTCTGTAGATGACATTGCAAGTGCAGTTCACAACTTGCTTAAAATGATTGAAGAAGAAGATTCCCTTTGCAGTTTATACGGTGAAGTTACCAAATCAACCCCCTCTCCCCTTCAAGACTCACTAGAGAATTCAAACACAGAATATTCTCTTAGCTAG 1011 0.4154 MALLEDHHHLSSSNEFSNFVVYDTISATPFSSHGSSSTSFLVEENKVEEYGERTTTRKRQSGEAGQGKKKRRRKPRVCKNKEEAENQRMIHITVERNRRKLMNEHLAVLRSLMPESYVQRGDQASIVGGAIEFVKELEQLLQCLEAQKLKLVHQGMAAQQSNKNNNEDELMMMMMMVMGSAPFSHFFVHPQFTWSQAPNKYASHHNKTNNNNNNNQAAMADIEVTLIETHANLRILSRKSPKQLSKLLSGFQNLSLTILHLNVTSMDPLVLYSISAKVEEECQLGSVDDIASAVHNLLKMIEEEDSLCSLYGEVTKSTPSPLQDSLENSNTEYSLS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00131 336 MobiDBLite consensus disorder prediction 49 63 - -
Arst5g00131 336 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 86 137 IPR011598 GO:0046983
Arst5g00131 336 MobiDBLite consensus disorder prediction 49 84 - -
Arst5g00131 336 Gene3D - 78 154 IPR036638 GO:0046983
Arst5g00131 336 Coils Coil 134 154 - -
Arst5g00131 336 PANTHER MAX DIMERIZATION, MAD 32 306 - -
Arst5g00131 336 SMART finulus 92 143 IPR011598 GO:0046983
Arst5g00131 336 MobiDBLite consensus disorder prediction 316 336 - -
Arst5g00131 336 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 85 156 IPR036638 GO:0046983
Arst5g00131 336 Pfam Helix-loop-helix DNA-binding domain 87 138 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00131 Arst-Chr5 1119487 1121015 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00131 78 278 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 51.244 5.35e-57 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst5g00131 HLH 4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00131 - - aip:107642328 573.933