Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00087 ATGATGGCTCCTCCGCCACCCGAAACGGTGATTGACATAAAGAACAGCAACAAGACCGCTCAACAAACAGTGGGTTTCAGCGGCGGTCTGGAGTTCTGGAACCTCACCTACACTGTGAGCAAGAAGTTGAAAGTGGAGGGGAAGTGGTCCAGTGAAGACGTGGACTTACTCCACGACATCACTGGCTATGCACCGAAGGGGTGCATCACGGCGGTGATGGGGCCCAGCGGTGCGGGGAAGTCGACGTTCTTGGACGGACTTGCTGGGAGGATAAAGAGTGGGAGCTTGAAAGGAAGGGTTTCATTGGATGGTGCAAGTGTGAGTGCAAGCTTGATCAAGAGAACTTCTGCATATATCATGCAGGACGATAGGCTTTTTCCTATGCTCACTGTTTATGAGACTTTGATGTTTGCTGCTGATTTTCGATTGGGGCCTCTCTCTCTTGCTGATAAAAGGCACAGAGTCGATAACTTGATAGATCAACTTGGCTTATCGACATCCAGGAACACGTACATAGGAGACGAAGGAACAAGAGGAGTTTCGGGCGGAGAGCGGCGGAGGGTGTCAATAGGAGTGGACATCATCCACGGTCCGTCTCTTCTCTTCCTAGACGAGCCAACCTCGGGGCTGGACTCCACAAGCGCACACAGTGTGATCGAAAAGGTTCACGACATCGCACGCAGCGGCAGCACCGTCATTCTCACCATCCACCAACCCTCTTCAAGAATCCAAATGCTCCTCGACCATCTCATCATCCTCGCCAGGGGCCAGCTGATGTTCCAAGGCTCACCTAATGACGTCACACAACATTTGACTCGCATGTCCCGCAGGGTCCCAAAGGGTGAGAACCCTATCGAACATCTCATTGACGTGATCCAAGAATACGATCAATGTGAGGTTGGAGTGGAGGCGCTTGCTGAGTTTGCACGCACCGGAATGAAGCCCCCTCCGTTGAAGGAGGGTGTGTCTGTGGAGCCGTCGCCATCGCCCTTGAGGGCATGGCATGGGCGTGGGTATGAGGAGAAGTCGTTGGAGGTGTCCGGGACGTCTCAAGTGAGTAGGAGAGTTGCGGATGAGTATGATCACAGTTTGAGGAGTCCGTACAACAAGAATTCGCAGTCGTGGAGCAGCAGCCACAGCGCTATGTTTCTCAAGTTCACTCCTTCACGACTCAGGAATAATAAAGAGTCCAAGCCACAAAATAATCCTGCAAGGCATGGTTCCTCACCAGGGTACTACACATACTCAAGCGAGATTCTGGCAGCGACACCAACCCCTCACAGCAGCGACTACACTGTGAATGAAAACGACTACCTCACCCCAGCAAACGGCGCTGCCTCGCCGGAGCAGCTGGGTCCGAAATTCGCCAACTCCTTCCTCTCGGAAACTTGGATCTTGATGCGGCGCAACTTCATCAACATCCGAAGAACTCCGGAGCTGTTCCTATCGCGCCTCATGGTACTCACCATCATGGGCTTCATGATGGCCACAATGTTTCACAACCCCAAACAGAATCTTCAGGGAATCACCAACCGCCTTAGCTTCTTCATCTTCACCGTCTGCCTCTTCTTCTTCTCCTCAAACGACGCCGTTCCCGCATTCATCCAAGAACGCTTCATCTTCATCAGAGAAACCTCTCACAATGCCTACAGAGCCTCTTCCTACACCATCGCCGGCTTAATCACTCACATGCCTTTTCTTCTCCTCCAAGCTTCCGTTTACGCCGCCATTGTTTGGTTTGCCCTAACCCTAAGAGGTCCTTTCTACTACTTCCTCATCGTCCTCTTCGTCTCGCTTCTCTCCACCAACTCCTTCGTCGTCTTCATCAGCTCCGTTGTTCCCAACTATATACTAGGTTACGCTGCAGTCATTGCTTTCACTGCCTTGTTCTTCTTATTTTGTGGATACTTCTTGAGCAGCCATGATATACCGGTTTACTGGCGCTGGATGAACAAGATTTCCACCATGACTTACCCTTATGAAGGGCTACTAATGAACCAGTATCAGACAAACATTACTTTTGGGCACAACAATGGCATCAATATAACTGGTTTTGGAATCTTGAATAATCTTCACATTGGGACTGAGAAGTATAAGAAGTGGGAGAATGTGGGAATCATGTTAGGTTGGGCTGTGTTATATAGGCTTTTGTTTTACATGGTGCTTCGATTTGGATCTAAGAACCAGAGGTCCTAG 2196 0.5041 MMAPPPPETVIDIKNSNKTAQQTVGFSGGLEFWNLTYTVSKKLKVEGKWSSEDVDLLHDITGYAPKGCITAVMGPSGAGKSTFLDGLAGRIKSGSLKGRVSLDGASVSASLIKRTSAYIMQDDRLFPMLTVYETLMFAADFRLGPLSLADKRHRVDNLIDQLGLSTSRNTYIGDEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSAHSVIEKVHDIARSGSTVILTIHQPSSRIQMLLDHLIILARGQLMFQGSPNDVTQHLTRMSRRVPKGENPIEHLIDVIQEYDQCEVGVEALAEFARTGMKPPPLKEGVSVEPSPSPLRAWHGRGYEEKSLEVSGTSQVSRRVADEYDHSLRSPYNKNSQSWSSSHSAMFLKFTPSRLRNNKESKPQNNPARHGSSPGYYTYSSEILAATPTPHSSDYTVNENDYLTPANGAASPEQLGPKFANSFLSETWILMRRNFINIRRTPELFLSRLMVLTIMGFMMATMFHNPKQNLQGITNRLSFFIFTVCLFFFSSNDAVPAFIQERFIFIRETSHNAYRASSYTIAGLITHMPFLLLQASVYAAIVWFALTLRGPFYYFLIVLFVSLLSTNSFVVFISSVVPNYILGYAAVIAFTALFFLFCGYFLSSHDIPVYWRWMNKISTMTYPYEGLLMNQYQTNITFGHNNGINITGFGILNNLHIGTEKYKKWENVGIMLGWAVLYRLLFYMVLRFGSKNQRS 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00087 731 CDD ABCG_EPDR 30 262 - -
Arst5g00087 731 Pfam ABC transporter 57 208 IPR003439 GO:0005524
Arst5g00087 731 FunFam ABC transporter G family member 6 40 278 - -
Arst5g00087 731 Pfam ABC-2 type transporter 237 294 IPR043926 GO:0140359
Arst5g00087 731 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 18 718 - -
Arst5g00087 731 ProSitePatterns ABC transporters family signature. 180 194 IPR017871 GO:0005524|GO:0016887
Arst5g00087 731 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 30 280 IPR003439 GO:0005524
Arst5g00087 731 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 274 IPR027417 -
Arst5g00087 731 Gene3D - 38 310 IPR027417 -
Arst5g00087 731 Pfam ABC-2 type transporter 463 668 IPR013525 GO:0016020|GO:0140359
Arst5g00087 731 SMART AAA_5 66 265 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00087 Arst-Chr5 715467 718205 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00087 50 294 Calmodulin-binding Proteins AT2G36910 26.210 1.49e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00087 K05681 - gmx:100804809 1105.89