LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst5g00086	ATGATGGATTTACAAGATTATTGGATATTAAGATTGGTTTTTGTTGTATATGTTCTTTGTGTCTACATATTTATCAGATCAGCTTCTGCAAGTGAAGGGTTTGAGAGCATAGCATGCTGTGCTGATTCAAATTATACAGATCCAGTGACCACCTTAAATTACACAACAGATTACAGTTCTTTCCCTGATAAGAAAAGTTGCAGGCACCTATCTGAAACCGTGTTACACCAAATTAGAGACGAAAATTTTCGATTGTTTGATATAAATGAGGGCTTTGATGTTTCAGTAGGGGTAACTCAATTAAGCAGAGTGAGATCATTCAGGTCTCAGGACTTAGAAATAGAGGGAGCTTTCAGGGCCACACAAAACTTCACAGACTTCTGCTTAGTGAAAAGGGTGGGTAGTCCCTATATTTCGCAGCTCGAATTAAGGCCACTTCATGAAGAGTACCTGCAAGGTTTACCTGCTAGTCTTCTGAAACTGATAACCAGAAATAACCTTGGAGGCAACATCAGTTTCAGGTACCCTGTTGACAAGAGTGATAGAATATGGAAAGAAACTTCAAATTCATCATCATCAGCTCTTGCATTATCTTTAAACATCACCAATTTTGATCCCAAAACTAGTATCTTCCCTCCCCTGCAAGTCCTACAAACTGCTCTTACCCACTCTGAGAGGTTGGAGTTCATCCACAATGTCCTCAACACCACGGATTATGAATATCGCATGTTTCTCTACTTCCTTGAATCAAATAGTACTCTCAAAGCAGGACAAAGAGTGTTTGACATCTTTGTTAACAGTGAGATCAAAGAGGGAAGATTTGACATATTGAATGGAGGGTCCAACTACAGATACACTCTCTTAAATGTATCAGCAAAAGGATCATTGAACCTAACCTTGGCCAAGGCATCTGGTTCCGAGAATGGACCACTTCTGAATGCTTATGAGATCATGCAGGTACACCCATGGATTGAAGGGACCAACCAAACAGATGTGGAAGTGATTAAAAAGGTAAGAGAACAGTTATTGGTGCAAAACCAAGACAATAAAGTGCTTAAGAGTTGGAGTGGAGACCCTTGTATTCTTTCCCCATGGCATGGAATAACATGTGATCATTCAAGTGGTCCATCTGTTATCACTGATTTGGATCTTTCCTCCAGTGATCTCAAAGGACCAATTCCTTCCAGTGTCACTGAGATGACCAACTTGAGAACACTGAACCTGAGCCACAATAGCTTCACTGGTGAAATCCCCTCCTCATTTCCACTTTCTTCCTTGTTGACATCAATAGATGTGAGTTACAATGATTTAGAGGGATCCCTTCCAGAATCCATTTCCTCACTGCCAAATTTAAAAACACTATATTTTGGTTGCAATGAACATTTGAAGGAAGACATTCCACCAAAATTGAGCAGTTCACTAATCCAGACAGATGGCGGAAGATGCACGGAAGAAGACTCCAGACTTGATCAAGTAGTGGTTATTAGTGTGGTTACATGTGGATCACTATTGATTACTTTGGTTATTGGAGTTATTTTTGTTTGCTGTTATAGACATAAACTAATTCCATGGGAAGGATTTGTTGGAAAGAGATACCCAGTGACAACAAACTTAATTTTCTCTTTGCCAAGCAAAGATGACTTCTTCATAAAGTCTGTGTCAATTCAAGCATTCACTTTGGAATATATAGAGGAGGCAACAGAGAAGTACAAGACGTTGATAGGTGAGGGAGGGTTTGGTCCAGTTTACCGGGGCATGCTAGACGATGGTCAAGAAGTGGCAGTGAAAGTCCGGTCAGCCACGTCGACTCAGGGAACTCGAGAATTTGACAATGAGCTAAACTTACTCTCTGCAATACAGCATGAGAACCTTGTGCCTCTTATTGGTTACTGCAATGAAAAGGATCAACAGATTCTCGTGTACCCTTTTATGTCCAATGGCTCTTTGCAGAATAGACTATATGGGGAACCAGCAAAGAGAAAAATATTAGACTGGCCAACTAGACTCTCAATCGCACTTGGTGCAGCTCGAGGGTTGGCATATCTTCACACATTTCCGGGACGTCCTGTAATACACAGGGACATAAAATCTAGCAATATACTCCTGGATCATAGCATGTGTGCAAAGGTTGCAGATTTTGGGTTCTCAAAATATGCTCCACAGGAAGGAGACAGTAATGTTTCACTTGAAGTAAGAGGAACTGCGGGCTATTTGGATCCAGAGTACTATACAACCCAACAGCTATCGGAAAAGAGTGATGTCTTCAGCTTTGGTGTGGTACTACTTGAAATTGTGAGTGGTCGAGAACCTCTCGACATAAAGAGGCCACGAAATGAGTGGAGCTTGGTTGAATGGGCTAAGCCATACATAAGAGCATCAAAGATAGAGGAAATTGTGGATCCTGGAATCAAGGGAGGATACCATGCAGAAGCAATGTGGAGAGTGGTGGAAGTGGCACTGCAATGTATTGAACCATTCTCCGCGTACAGGCCATGCATGGATGACATTGTCCGTGAGTTGGAGGATGCTCTGATCATAGAAAACAATGCATCGGAATACATGAAGTCCATAGACAGCCTCGGAGGATCAAACCGCTACTCTTTCGTCATGGATAAGAGGGTTCCGCCCTCTACTTCATCTACTGCAGAATCTACCATCACATCACAAACCTTGTCCCTCCCACAACCAAGATAG	2694	0.418	MMDLQDYWILRLVFVVYVLCVYIFIRSASASEGFESIACCADSNYTDPVTTLNYTTDYSSFPDKKSCRHLSETVLHQIRDENFRLFDINEGXFDVSVGVTQLSRVRSFRSQDLEIEGAFRATQNFTDFCLVKRVGSPYISQLELRPLHEEYLQGLPASLLKLITRNNLGGNISFRYPVDKSDRIWKETSNSSSSALALSLNITNFDPKTSIFPPLQVLQTALTHSERLEFIHNVLNTTDYEYRMFLYFLESNSTLKAGQRVFDIFVNSEIKEGRFDILNGGSNYRYTLLNVSAKGSLNLTLAKASGSENGPLLNAYEIMQVHPWIEGTNQTDVEVIKKVREQLLVQNQDNKVLKSWSGDPCILSPWHGITCDHSSGPSVITDLDLSSSDLKGPIPSSVTEMTNLRTLNLSHNSFTGEIPSSFPLSSLLTSIDVSYNDLEGSLPESISSLPNLKTLYFGCNEHLKEDIPPKLSSSLIQTDGGRCTEEDSRLDQVVVISVVTCGSLLITLVIGVIFVCCYRHKLIPWEGFVGKRYPVTTNLIFSLPSKDDFFIKSVSIQAFTLEYIEEATEKYKTLIGEGGFGPVYRGMLDDGQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLIGYCNEKDQQILVYPFMSNGSLQNRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRPVIHRDIKSSNILLDHSMCAKVADFGFSKYAPQEGDSNVSLEVRGTAGYLDPEYYTTQQLSEKSDVFSFGVVLLEIVSGREPLDIKRPRNEWSLVEWAKPYIRASKIEEIVDPGIKGGYHAEAMWRVVEVALQCIEPFSAYRPCMDDIVRELEDALIIENNASEYMKSIDSLGGSNRYSFVMDKRVPPSTSSTAESTITSQTLSLPQPR	898

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst5g00086	898	FunFam	Calmodulin-binding receptor-like cytoplasmic kinase 3	645	861	-	-
	Arst5g00086	898	Pfam	Malectin-like domain	90	321	IPR024788	-
	Arst5g00086	898	Gene3D	Transferase(Phosphotransferase) domain 1	645	858	-	-
	Arst5g00086	898	SMART	serkin_6	569	846	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst5g00086	898	Gene3D	Ribonuclease Inhibitor	332	480	IPR032675	-
	Arst5g00086	898	Gene3D	Phosphorylase Kinase; domain 1	543	644	-	-
	Arst5g00086	898	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	691	703	IPR008271	GO:0004672\|GO:0006468
	Arst5g00086	898	SUPERFAMILY	L domain-like	351	472	-	-
	Arst5g00086	898	FunFam	Leucine-rich repeat receptor-like kinase	331	466	-	-
	Arst5g00086	898	Pfam	Protein tyrosine and serine/threonine kinase	572	841	IPR001245	GO:0004672\|GO:0006468
	Arst5g00086	898	MobiDBLite	consensus disorder prediction	874	898	-	-
	Arst5g00086	898	MobiDBLite	consensus disorder prediction	872	898	-	-
	Arst5g00086	898	CDD	STKc_IRAK	575	842	-	-
	Arst5g00086	898	FunFam	Nodulation receptor kinase	536	644	-	-
	Arst5g00086	898	ProSiteProfiles	Protein kinase domain profile.	569	846	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Arst5g00086	898	PANTHER	OS07G0107800 PROTEIN-RELATED	37	845	-	-
	Arst5g00086	898	SUPERFAMILY	Protein kinase-like (PK-like)	549	841	IPR011009	-
	Arst5g00086	898	Gene3D	-	161	322	-	-
	Arst5g00086	898	ProSiteProfiles	Leucine-rich repeat profile.	403	425	IPR001611	GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst5g00086	Arst-Chr5	693419	699964	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst5g00086	18	848	Receptor kinase-like Gene Family	AT1G67720	34.403	1.97e-127	405

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-I-1	Arst5g00086		PK_Tyr_Ser-Thr	2.9e-44	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst5g00086	-		-	gmx:100781986	1312.75