Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00078 ATGGCCGCAAACTGGCATTCTTTTCTTCACCTTTTATTCTCATCCTTCCATGTTTTTATTCTGAAAACTTATTCAATCGAATTCCAAATATCTAGGTTTACTACTGGCGATCCAAACATAGTTTACAGAGGACAAGCTATCCCTCGTGTTGGAACAATAGAATTGAACAATAACATTGATTACTTATTCCAAGTTGGATCAGCCATATACTCCAAAGATGTTCTACTTTGGGAATCAAGATCAGGAAAACAAGCTGATTTCAAAACACACTTCACCTTTGTTATTGACACTCAAGGCAATTCTCAACATGCTGCTGGCCTTGCATTCTTCCTTGCACCTTCTGGATTCCAAATACCACCAAACTCTGCCGGCGGCTTCCTAGGCCTATACAACACAACCACTGCCGACTCGCTGCGCAATCAGATTGTTCATGTTGAGTTTGACTCCTTCCCTAATCTGGATTGGGATCCCAAAATGGAGCATGTGGGAATCAATGTTAATTCAATTTCTTCGGCAAACTACACTGCTTGGAATGCTAGCAAGCATAGTAATGACATTGCTGATGCATGGATCACATACAATTCAACAAGCAAGATTCTAAGTGTGTCATGGAAATACCAAACAACCTCTACCTCTCAAGAGAATACTACTCTTTCTCATCAAATTGATTTGATGAAGGTCTTGCCTCAATCGGTTACAATTGGATTTTCCGCGGCTACTAGTGAGTACACAGAACGACATGTTATTCAGTCTTGGGAGTTCAGTTCTAGTTTGGACGCAGAGCCTGGTAAAGGAAAGAATTCGAACAAGACATGGAAGGTGGTGGTTGGATCAGTTGTTGCAGGAGCTGTTTTTATTGTGGTAGTTATTTCAACATATGTAATATTTAGAAGATGGAAGAGCAAGAAAAAGGATGCAAAAATAGAGAGGGTGAGCTCTATTAATGATGATTTTGAAAGAGGAGCTGGACCAAGAAGGTTCTCTTATGAAGAGATTGTCTTTGCTACCAATAATTTTTCCCCAAACAGGAAGTTAGGCCAAGGTGGATTTGGAGCAGTGTATAGAGGCTACTTTGCTGATCTAGATTTGGTTGTTGCGGTTAAGAAGATATCAAGTGGATCAAGACAAGGGAAAAGAGAGTATGTAACTGAAGTCAAAGTCATTAGCAGGTTAAGGCATAGGAATCTTGTACAACTCATAGGTTGGTGCCATGATCAAGGTGAGTTCCTTCTTGTTTATGAGTATATGCCAAATGGTAGTCTTGATTCCCATTTGTTTGGGAATAGGACTCCATTATCTTGGAACTTGAGGCACAAGATAGCTCTTGGATTGGCCTCTGCTATTCTCTATCTTCATGAAGAATGGGAACAATGTGTTATTCACAGAGATATCAAACCAAGCAATGTGATGTTGGATTCTAGTTTCAATGTCAAGCTTGGTGATTTCGGCTTGGCTAAGCTCATAGATCATGAGTTAGGGTCTCAGACATCGGCTTTAGCCGGAACTATTGGCTACATGGCTCCAGAATATATAAGCAGTCGTAGGGCAAGTAAGGAGTCAGATGTGTATGGCTTTGGATTGGTTGCTTTAGAGATTGCCACAGGAAAAAGGGTGTTTGACCTTGTAGATAATGAAGAGAGTCAAAAGGGGTTGGTTGAGTGGGTTTGGGATCATTATGGAAGAGAAGAATTGCATAAGGTTGTGGATGAGAGAGTAGGAAAGGATTTTGATGAGAAAGAAGTGAAGTATATGATGATTGTTGGAATGTGGTGTTGTCATCCTGATAAGAATATGAGGCCATCAATAAGAGAAGCAATTCAAGTGCTTAATTTAGAAGGTCCAGTGCCACAGCTTCCAACAAAGATGCCTGTTGCCATTTATTATATCCCTACATCTTCTGTTAGCTCTGATAATGCATCCATTAGTGTTAGCTTCCAATCATCAGGTCGTTGA 1953 0.4035 MAANWHSFLHLLFSSFHVFILKTYSIEFQISRFTTGDPNIVYRGQAIPRVGTIELNNNIDYLFQVGSAIYSKDVLLWESRSGKQADFKTHFTFVIDTQGNSQHAAGLAFFLAPSGFQIPPNSAGGFLGLYNTTTADSLRNQIVHVEFDSFPNLDWDPKMEHVGINVNSISSANYTAWNASKHSNDIADAWITYNSTSKILSVSWKYQTTSTSQENTTLSHQIDLMKVLPQSVTIGFSAATSEYTERHVIQSWEFSSSLDAEPGKGKNSNKTWKVVVGSVVAGAVFIVVVISTYVIFRRWKSKKKDAKIERVSSINDDFERGAGPRRFSYEEIVFATNNFSPNRKLGQGGFGAVYRGYFADLDLVVAVKKISSGSRQGKREYVTEVKVISRLRHRNLVQLIGWCHDQGEFLLVYEYMPNGSLDSHLFGNRTPLSWNLRHKIALGLASAILYLHEEWEQCVIHRDIKPSNVMLDSSFNVKLGDFGLAKLIDHELGSQTSALAGTIGYMAPEYISSRRASKESDVYGFGLVALEIATGKRVFDLVDNEESQKGLVEWVWDHYGREELHKVVDERVGKDFDEKEVKYMMIVGMWCCHPDKNMRPSIREAIQVLNLEGPVPQLPTKMPVAIYYIPTSSVSSDNASISVSFQSSGR 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00078 650 ProSiteProfiles Protein kinase domain profile. 339 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00078 650 FunFam L-type lectin-domain containing receptor kinase IX.1 324 415 - -
Arst5g00078 650 Pfam Protein kinase domain 341 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00078 650 Pfam Legume lectin domain 26 264 IPR001220 GO:0030246
Arst5g00078 650 Gene3D Phosphorylase Kinase; domain 1 324 415 - -
Arst5g00078 650 CDD lectin_legume_LecRK_Arcelin_ConA 26 258 IPR001220 GO:0030246
Arst5g00078 650 SMART serkin_6 339 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00078 650 PANTHER - 55 610 - -
Arst5g00078 650 FunFam Lectin-domain containing receptor kinase A4.3 416 629 - -
Arst5g00078 650 Gene3D - 24 270 - -
Arst5g00078 650 CDD STKc_IRAK 345 610 - -
Arst5g00078 650 FunFam L-type lectin-domain containing receptor kinase IX.1 24 267 - -
Arst5g00078 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Arst5g00078 650 ProSitePatterns Protein kinases ATP-binding region signature. 345 369 IPR017441 GO:0005524
Arst5g00078 650 Gene3D Transferase(Phosphotransferase) domain 1 416 631 - -
Arst5g00078 650 SUPERFAMILY Protein kinase-like (PK-like) 323 638 IPR011009 -
Arst5g00078 650 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 260 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00078 Arst-Chr5 640117 642142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00078 11 628 Receptor kinase-like Gene Family AT5G10530 56.550 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Arst5g00078 Pkinase 5.6e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00078 - - adu:107487060 1283.86