LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Arst5g00068	ATGGCACCATCATCACAACCTGAATTTGAGCATCCTAGGAAGGCTTTTGGATGGGCAGCAAGGGATTCTTCTGGAGTTCTCTCCCCTTTCAATTTCTCTAGAAGGGAAATTGGAGAGAAAGACGTTGCATTAAAAGTGTTGTATTGTGGTATATGCCACACGGACCTGCACATGGTGAAGAACGACTGGGGCAATTCCATCTACCCAATTGTCCCCGGGCATGAAGTAGTTGGCATAGTGAAAGAGGTGGGAAGCAAAGTACAAAAGTACAAAGTTGGAGACAAAGTGGGTGTGGGATACTTCGTAGAATCTTGTCGCTCCTGCCAAAATTGTATTGACAATCTTGAGAATTACTGTCCCAAAAACATTGTAACACAAGGTGCCAAAAACATCGATGGTACCACCACTTATGGTGGTTACTCTGACTCGATGGTTGTTGATGAACTCTTTGTGATTCGAATTCCTGAAGGGCTACCTCTTGATGCTGCGGCTCCTCTCCTTTGTGCTGGGATTACAGTGTACAGCCCTCTTAAATATTATGGGCTTGATAAGCCTGGTTTGCATGTGGGTGTAGTTGGGCTTGGTGGGCTTGGCCATATGGCAGTGAAGTTTGCCAAAGCCCATGGGGCTAAGGTCACTGTCATTAGTACTTCACCCAACAAAAAGGACGAAGCAATAATTCATTTAGGAGCTGATTCTTTTTTGGTTAGTCATGATCTAGAGCAGATGGAGGGTGCAAAGGAAAGTTTGGATGGCATCATTGACACAGTTTCTGCTCTTCATTCCATTATACCTCTAATTGGCTTATTAAAGACTCATGGAAAACTTGTTATGGTTGGGGCAGTTTCGAAGCCTCTGGAAGTGCCAGCCTTTCCTTTGATTATGGGAAGAAAACTTGTTGCTGGTAGTCTGGTTGGAGGGTTGAAAGAGACACAGGAAATGATTGATTTTGCTGCAAAACATAATGTGAAGCCTGAGATTGAAGTTGTTCCCATGGATTACGTGAACGTTGCAATGGAGCGCCTCGCTAAAGCTGATGTCAAATATCGATTCGTCATTGATGTTGAAAACACACTAAAACCAAGCTCTTGA	1092	0.4386	MAPSSQPEFEHPRKAFGWAARDSSGVLSPFNFSRREIGEKDVALKVLYCGICHTDLHMVKNDWGNSIYPIVPGHEVVGIVKEVGSKVQKYKVGDKVGVGYFVESCRSCQNCIDNLENYCPKNIVTQGAKNIDGTTTYGGYSDSMVVDELFVIRIPEGLPLDAAAPLLCAGITVYSPLKYYGLDKPGLHVGVVGLGGLGHMAVKFAKAHGAKVTVISTSPNKKDEAIIHLGADSFLVSHDLEQMEGAKESLDGIIDTVSALHSIIPLIGLLKTHGKLVMVGAVSKPLEVPAFPLIMGRKLVAGSLVGGLKETQEMIDFAAKHNVKPEIEVVPMDYVNVAMERLAKADVKYRFVIDVENTLKPSS	363

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Arst5g00068	363	Gene3D	-	18	355	-	-
	Arst5g00068	363	FunFam	Uncharacterized protein	18	168	-	-
	Arst5g00068	363	Pfam	Zinc-binding dehydrogenase	196	319	IPR013149	-
	Arst5g00068	363	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	158	324	IPR036291	-
	Arst5g00068	363	ProSitePatterns	Zinc-containing alcohol dehydrogenases signature.	73	87	IPR002328	GO:0008270\|GO:0016491
	Arst5g00068	363	FunFam	Cinnamyl alcohol dehydrogenase	169	325	-	-
	Arst5g00068	363	FunFam	Putative cinnamyl alcohol dehydrogenase 6	326	355	-	-
	Arst5g00068	363	CDD	CAD1	16	354	IPR047109	GO:0016616
	Arst5g00068	363	Gene3D	-	169	325	-	-
	Arst5g00068	363	PANTHER	ALDEHYDE REDUCTASE	7	358	IPR047109	GO:0016616

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Arst5g00068	Arst-Chr5	559566	562442	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Arst5g00068	13	362	Monolignol Biosynthesis Gene Families	AT4G37990	69.714	2.05e-168	472

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Arst5g00068	K23232		-	gmx:100816901	570.081

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