Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00054 ATGAAGAGAATGGATTCGAAAAGCGATAACGGAAGAGAGTTTTCTAGCGACGACGACGCATCTCCGAGATGTGTAATGGAAGCTCCTGTTTCTGAAACAGAATCCGACTCCACCACTACCAGCAGCAGCAGCAGCAGCTCCTTCTCCCCGGAGAAGCTTCCGCTTCCGCCACCGCCAGCGGTGGCAGCGGCGGCGCTGAGAAAAACGAATTCGAAGGAGAGCAACTTGCAGCAGTGGAAGACAATGATCGACGTGTTCAAGTTCAAGAACGTTAAGAAATTGACGACGATTCCTCTGCTCTCTGCGGGGAACGAAATCACCAGGAAGGGTTTTGCTAAGAAACTTGCTCGGATTCGAAGCGCCGAAGATAGCATCGACATAGGTGTTATTCCGACGAAGCCTTCTTGGAGGAACTTCGATTACGCGGAACTCGCAGCTGCAACTAACGATTTCAACCCAGAGAACCTGGTTGGTAAAGGTGGCCATGCAGAAGTGTACAAAGGGCACCTACCTGATGGGAAAGTTATAGCAGTCAAGAGACTAATGAAGAATGCCAAGGATGCTGGGGACAGAGCTGGTGATTTCTTGACAGAACTTGGGATCATTGCACACATAAACCACCCAAATGCAACACGCCTTGTTGGGTTTGGGATTGAACGCGGTCACTACTTTGTACTAGAATATGCTCCACATGGCAGCCTTTCTTCGTTGCTCTTTGGTTCTGAATGCTTGGAGTGGAAGACAAGGTTCAAGGTCTCCATTGGAGTGGCAGAAGGGTTGCAGTATCTGCATCAAGATTGTCCTAGAAGAATCATTCATAGGGATATCAAAGCCTCTAACATACTACTCAATGAAAATTATGAAGCTGAGATTTCAGATTTTGGATTGGCAAAGTGGCTTCCAACTAATTGGGCTCACCACGTTGTCTTCCCAATAGAAGGCACATTTGGGTATTTGGCTCCAGAGTACTTCATGCATGGAGTTGTGGATGAGAAGACTGATGTATTTGCATTTGGGGTTTTGTTACTGGAGATCATAACTGGTCGTCGTGCTGTCGATTCAGATAGTAGGCAAAGCCTTGTGATCTGGGCTAAGCCACTGCTGGATACAATGAATGTGACGGAAATAGCAGACCCCAGATTAGAAGGGGAATATGATCCTATTGAAATGAAGCATGCCATGGTAACAGCTTCCTTGTGTGTCCACCAGATATCCTCCAAGAGACCATTCATGAATCAGGTTGTACCCTTACTCAAGGGTGAAGTAGCAGCTATTGAACTCAAACAAAACTCACCAGCAACAAGATCACTCTTGTTAGAGGCATGTGACCTTGAGGACTATACTTGCTCTAGTTACTTGAAGGATCTCAACCGCCATAGGGAGTTAATCAATGAGTGA 1398 0.4664 MKRMDSKSDNGREFSSDDDASPRCVMEAPVSETESDSTTTSSSSSSSFSPEKLPLPPPPAVAAAALRKTNSKESNLQQWKTMIDVFKFKNVKKLTTIPLLSAGNEITRKGFAKKLARIRSAEDSIDIGVIPTKPSWRNFDYAELAAATNDFNPENLVGKGGHAEVYKGHLPDGKVIAVKRLMKNAKDAGDRAGDFLTELGIIAHINHPNATRLVGFGIERGHYFVLEYAPHGSLSSLLFGSECLEWKTRFKVSIGVAEGLQYLHQDCPRRIIHRDIKASNILLNENYEAEISDFGLAKWLPTNWAHHVVFPIEGTFGYLAPEYFMHGVVDEKTDVFAFGVLLLEIITGRRAVDSDSRQSLVIWAKPLLDTMNVTEIADPRLEGEYDPIEMKHAMVTASLCVHQISSKRPFMNQVVPLLKGEVAAIELKQNSPATRSLLLEACDLEDYTCSSYLKDLNRHRELINE 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00054 465 MobiDBLite consensus disorder prediction 1 20 - -
Arst5g00054 465 SUPERFAMILY Protein kinase-like (PK-like) 135 427 IPR011009 -
Arst5g00054 465 Gene3D Transferase(Phosphotransferase) domain 1 230 434 - -
Arst5g00054 465 Pfam Protein kinase domain 154 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00054 465 ProSitePatterns Protein kinases ATP-binding region signature. 157 179 IPR017441 GO:0005524
Arst5g00054 465 PANTHER OS08G0249100 PROTEIN 14 430 IPR046958 -
Arst5g00054 465 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 125 228 - -
Arst5g00054 465 MobiDBLite consensus disorder prediction 31 50 - -
Arst5g00054 465 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 230 432 - -
Arst5g00054 465 MobiDBLite consensus disorder prediction 1 59 - -
Arst5g00054 465 Gene3D Phosphorylase Kinase; domain 1 112 228 - -
Arst5g00054 465 ProSiteProfiles Protein kinase domain profile. 151 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst5g00054 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 271 283 IPR008271 GO:0004672|GO:0006468
Arst5g00054 465 SMART serkin_6 151 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00054 Arst-Chr5 463515 468394 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00054 139 414 Trihelix Transcription Factor Family AT1G68690 45.965 3.29e-71 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Arst5g00054 Pkinase 2.8e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00054 - - gmx:100775930 673.315