Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00039 ATGCCTTCAGTTGCCATTATCATTTTTGCAACATGGGGTGTTGGTCCATTAGCATGTCAGATAAGGAAATTGCTTTTCCAGAGGAGTGATAATAGTTGGAAGAAAAGTAAAACACATTATATAGTAACTTCTTACCTTCGACCATTACTTTTATGGACTGGAGCAATACTCTTTTGCAGAGCATTGGAACCAGTAGTTCTACCTACAGAAACTAGCCAGGTTATTAAGGAACGGCTTCTGCATTTTGTAAGATCATTGTCAACTGTTCTGGCCTTTGCCTATTGTTTATCAAGTGTGATTCAGCAAACGCAGAAATTCTTATCTGAGAGCACTGATCCAAGTGAGACGAGAAATATGGGATTCCAATTTGCAGGAAAAGCTGTCTATTCGGCCGTATGGATTGCAGCTTTTTCACTGTTCATGGAATTGCTAGGCTTCTCTACACAGAGATGGGTTACTGCTGGAGGTCTTGGGACAGTTTTGTTGACTCTTGCCGGTCGTGAGATATTTACAAATTTCCTTTCAAGTGCGATGATCCATGCAACTCGTCCTTTTGTGATTAATGAGTGGATTCAAACAAAGATTGAAGGATATGAAGTTTCTGGTACCGTTGAGCATGTTGGCTGGTGGTCACCTACTATTGTAAGAGGTGAAGATGGTGAAGCTGTACACATTCCAAACCACAAATTCACAGTGAATGTTGTGCGAAACCTCACTCAGAAAACACATTGGCGAATCAAAACCCATTTAGCCGTTAGTCATTTGGATGTAAAAAAGATTAATAATATTGTTGCCGATATGCGAAAAGTACTAGCGAAAAATCCTCAAGTTGAGCAGCAGAGGTTGCACAGGAGGGTGTTCCTTGACAATATAAATCCTGAAAATCAGGCCCTTTTGATATTGGTGTCATGTTTCGTCAAGACCTCACATTTTGAAGAATATTTATGTGTTAAGGAAGCTATACTGTTGGATCTTCTTAGAGTTATTGGTCATCACAGAGCCCGTCTTGCAACACCAGTTCGCACCCTGCAGAAAATATACAGTGATGCTGAATTGGACAACATACCATACTCAGATTCCCCAATTAGTGGTGCCGGAACTGTATCTAACCGTCCATTATTAATGATTGAATCACCTAACAAGATCAATGCAGATGATAAAGCAAAAGTCCGATCAGCACGAGCAGCTGGAGATCAAGATAACAAGGCAACTGTGCAAACCAGACTTGAAACGAAGGTTGGTTCATCAGGAATACAAGATGACTCCGAGGTGGATGCCAAAGTCGCTACATCTAATTCTATCACAAACGGAAATGCCAAGACTGTGTTGACACCCAAGCCTGATCCTGAAGTGGGTGAGAACAAGCCGATAAAACCAGATTCCAAGGGTCAGGCTGTTAAAAACATCAAGCCTAATATTGAATCCGAGAGTGTAGTTTCCTCCTCGGGAACAGGCAATGTCGATAAAGCCGGTGGAGTTCCTACGAATACACCAACAAAGCAACAAGGGGAAAGGAAACTGGCTACACAACCTCCTCCGGCATCAAGGCCTGTTCTTGAAGAGAATATAGTACTTGGTGTTGCATTGGAGGGATCAAAGAGGACCCTTCCTATTGAGGAGGGTATTGAGACTTCCGCAACTAGAGAGGCAAAGGAAATGGCTGCTTCCCATGGTGGAAATGGATCTCCAAAGGGCGGGGATGGAAATGACAAGAAAAATTTATAG 1725 0.4226 MPSVAIIIFATWGVGPLACQIRKLLFQRSDNSWKKSKTHYIVTSYLRPLLLWTGAILFCRALEPVVLPTETSQVIKERLLHFVRSLSTVLAFAYCLSSVIQQTQKFLSESTDPSETRNMGFQFAGKAVYSAVWIAAFSLFMELLGFSTQRWVTAGGLGTVLLTLAGREIFTNFLSSAMIHATRPFVINEWIQTKIEGYEVSGTVEHVGWWSPTIVRGEDGEAVHIPNHKFTVNVVRNLTQKTHWRIKTHLAVSHLDVKKINNIVADMRKVLAKNPQVEQQRLHRRVFLDNINPENQALLILVSCFVKTSHFEEYLCVKEAILLDLLRVIGHHRARLATPVRTLQKIYSDAELDNIPYSDSPISGAGTVSNRPLLMIESPNKINADDKAKVRSARAAGDQDNKATVQTRLETKVGSSGIQDDSEVDAKVATSNSITNGNAKTVLTPKPDPEVGENKPIKPDSKGQAVKNIKPNIESESVVSSSGTGNVDKAGGVPTNTPTKQQGERKLATQPPPASRPVLEENIVLGVALEGSKRTLPIEEGIETSATREAKEMAASHGGNGSPKGGDGNDKKNL 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00039 574 MobiDBLite consensus disorder prediction 468 508 - -
Arst5g00039 574 Gene3D - 184 237 IPR023408 -
Arst5g00039 574 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 2 557 IPR045042 -
Arst5g00039 574 SUPERFAMILY Sm-like ribonucleoproteins 169 239 IPR010920 -
Arst5g00039 574 Gene3D - 80 183 - -
Arst5g00039 574 Pfam Mechanosensitive ion channel 126 332 IPR006685 GO:0016020|GO:0055085
Arst5g00039 574 MobiDBLite consensus disorder prediction 537 574 - -
Arst5g00039 574 MobiDBLite consensus disorder prediction 430 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00039 Arst-Chr5 322043 326059 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00039 1 561 Mechanosensitive Ion Channel Family AT5G10490 60.764 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00039 K22047 - gmx:100789444 857.825