Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00019 ATGGCTGAGAACTCAAACCTTCTACTATGTTCCGAAAACAACATCACTTGTTTTGATGATGATGATGATGATGGTGATGATTTGGAGTGTAATGTTGCTGCTGCTGATGGGTCTGGAATCTTACCATGTTGGGACCACACCAACAACCTTAACTCCGACCAACCATGTCCGAGTTCAGAAAACCGTGGATCGGGTCCATTGTATTGTTTTGATGTTCTGAGTGAAGAAACAATGAAAGACATGGTGGAAAGGGAAAAAGAGCATTTACCAAAGGAGGATTATCTTAAGAGGCTACGTAGTGGGGACTTGGACCTCAGTGGTAGGAGAGAGACCATTGATTGGATTTGGAAGGCTCATTCCTATTATGGTTTTGGACCCTTGACCTTTTGTCTATCTGTGAACTACTTGGATCGCTTCTTATCCTTGTATGAATTGCCGAGAGGTAAAAGTTGGACTATGCAATTGTTAGCTGTAGCTTGCTTGTCGATTGGGGCGAAAATGGAGGAGGTTAAAGTGCCGCAATCCGTCGACTTACAGGTTGGAGAACCAAAGTTTGTATTTGAAGCTAAAACCATTCAAAGAATGGAACTATTGGTGTTAAGCACATTGAGATGGAAAATGCAAGCTTTAACTCCTTGTTCCTTCATAGATTATTTCCTAAAGAAGATCACTTTCAAGCAACATTTGGCGAATCGGACCATTTCGAGATCAATACAGCTCACCCTTAGCATAATTAGAGGGATTGACTTCTTGGAGTTCAGGCCTTCTGAAATCGCAGCGGCTGTGGCGATTTCTGTTTCAAAGGAGTTGCAACAAGCGAAAGATATCGATAAGGCCTTAGCTAGCTTCTTCATTGCAGAGAAGGAGAAAGTTCTAAAGTGTGTTGAATTGATAAGAGACTTGGCATTGATGAATGTTTCTAATTTTGGTGCAAAACATCATGTGCCATTTGTGCCTCAAAGCCCAATTGGGGTGCTTGATGGTGGTGGATGCTTGAGCTATAAGAGTGATGAATTAACAACACTTGGTTCCTCATGCCCAAATAGTCCAAAAACTAAAAGGTTCAAATCAGAAGGAGGACCTTGTTGTAATGGGACATCAGATTCATGA 1110 0.4171 MAENSNLLLCSENNITCFDDDDDDGDDLECNVAAADGSGILPCWDHTNNLNSDQPCPSSENRGSGPLYCFDVLSEETMKDMVEREKEHLPKEDYLKRLRSGDLDLSGRRETIDWIWKAHSYYGFGPLTFCLSVNYLDRFLSLYELPRGKSWTMQLLAVACLSIGAKMEEVKVPQSVDLQVGEPKFVFEAKTIQRMELLVLSTLRWKMQALTPCSFIDYFLKKITFKQHLANRTISRSIQLTLSIIRGIDFLEFRPSEIAAAVAISVSKELQQAKDIDKALASFFIAEKEKVLKCVELIRDLALMNVSNFGAKHHVPFVPQSPIGVLDGGGCLSYKSDELTTLGSSCPNSPKTKRFKSEGGPCCNGTSDS 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00019 369 Gene3D - 91 208 - -
Arst5g00019 369 CDD CYCLIN_AtCycD-like_rpt2 211 298 - -
Arst5g00019 369 SUPERFAMILY Cyclin-like 67 207 IPR036915 -
Arst5g00019 369 Pfam Cyclin, C-terminal domain 211 304 IPR004367 -
Arst5g00019 369 FunFam D2/4-type cyclin 91 204 - -
Arst5g00019 369 MobiDBLite consensus disorder prediction 348 369 - -
Arst5g00019 369 CDD CYCLIN_AtCycD-like_rpt1 108 205 - -
Arst5g00019 369 SUPERFAMILY Cyclin-like 192 303 IPR036915 -
Arst5g00019 369 SMART Cyclin_C_2 210 338 IPR004367 -
Arst5g00019 369 Pfam Cyclin, N-terminal domain 78 207 IPR006671 -
Arst5g00019 369 SMART cyclin_7 113 201 IPR013763 -
Arst5g00019 369 FunFam D6-type cyclin 205 296 - -
Arst5g00019 369 Gene3D - 79 297 - -
Arst5g00019 369 PANTHER CYCLINS 75 300 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00019 Arst-Chr5 187551 190449 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00019 74 284 Core Cell Cycle Gene Families AT5G65420 60.563 1.59e-92 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00019 K18810 - gmx:100794010 423.32