Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst5g00018 ATGGCTGAGAACTCAAACCTTCTACTATGTTCCGAAAACAACATCACTTGTTTTGATGATGATGATGATGATGGTGATGATTTGGAGTGTAATGTTGCTGCTGCTGATGGGTCTGGAATCTTACCATGTTGGGACCACACCAACAACCTTAACTCCGACCAACCATGTCCGAGTTCAGAAAACCGTGGATCGGGTCCATTGTATTGTTTTGATGTTCTGAGTGAAGAAACAATGAAAGACATGGTGGAAAGGGAAAAAGAGCATTTACCAAAGGAGGATTATCTTAAGAGGCTACGTAGTGGGGACTTGGACCTCAGTGGTAGGAGAGAGACCATTGATTGGATTTGGAAGAGAGGTAAAAGTTGGACTATGCAATTGTTAGCTGTAGCTTGCTTGTCGATTGGGGCGAAAATGGAGGAGGTTAAAGTGCCGCAATCCGTCGACTTACAGGTTGGAGAACCAAAGTTTGTATTTGAAGCTAAAACCATTCAAAGAATGGAACTATTGGTGTTAAGCACATTGAGATGGAAAATGCAAGCTTTAACTCCTTGTTCCTTCATAGATTATTTCCTAAAGAAGATCACTTTCAAGCAACATTTGGCGAATCGGACCATTTCGAGATCAATACAGCTCACCCTTAGCATAATTAGAGGGATTGACTTCTTGGAGTTCAGGCCTTCTGAAATCGCAGCGGCTGTGGCGATTTCTGTTTCAAAGGAGTTGCAACAAGCGAAAGATATCGATAAGGCCTTAGCTAGCTTCTTCATTGCAGAGAAGGAGAAAGTTCTAAAGTGTGTTGAATTGATAAGAGACTTGGCATTGATGAATGTTTCTAATTTTGGTGCAAAACATCATGTGCCATTTGTGCCTCAAAGCCCAATTGGGGTGCTTGATGGTGGTGGATGCTTGAGCTATAAGAGTGATGAATTAACAACACTTGGTTCCTCATGCCCAAATAGTCCAAAAACTAAAAGGTTCAAATCAGAAGGAGGACCTTGTTGTAATGGGACATCAGATTCATGA 1023 0.4174 MAENSNLLLCSENNITCFDDDDDDGDDLECNVAAADGSGILPCWDHTNNLNSDQPCPSSENRGSGPLYCFDVLSEETMKDMVEREKEHLPKEDYLKRLRSGDLDLSGRRETIDWIWKRGKSWTMQLLAVACLSIGAKMEEVKVPQSVDLQVGEPKFVFEAKTIQRMELLVLSTLRWKMQALTPCSFIDYFLKKITFKQHLANRTISRSIQLTLSIIRGIDFLEFRPSEIAAAVAISVSKELQQAKDIDKALASFFIAEKEKVLKCVELIRDLALMNVSNFGAKHHVPFVPQSPIGVLDGGGCLSYKSDELTTLGSSCPNSPKTKRFKSEGGPCCNGTSDS 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst5g00018 340 SUPERFAMILY Cyclin-like 163 274 IPR036915 -
Arst5g00018 340 Gene3D - 120 179 - -
Arst5g00018 340 Gene3D - 180 268 - -
Arst5g00018 340 Pfam Cyclin, C-terminal domain 182 275 IPR004367 -
Arst5g00018 340 SMART Cyclin_C_2 181 309 IPR004367 -
Arst5g00018 340 FunFam D6-type cyclin 171 267 - -
Arst5g00018 340 CDD CYCLIN_AtCycD-like_rpt2 182 269 - -
Arst5g00018 340 MobiDBLite consensus disorder prediction 319 340 - -
Arst5g00018 340 Pfam Cyclin, N-terminal domain 123 178 IPR006671 -
Arst5g00018 340 SUPERFAMILY Cyclin-like 67 178 IPR036915 -
Arst5g00018 340 PANTHER CYCLINS 123 271 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst5g00018 Arst-Chr5 187550 190450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst5g00018 74 255 Core Cell Cycle Gene Families AT5G65420 52.113 3.87e-71 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst5g00018 K18810 - gmx:100794010 354.369