Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04419 ATGAGAGGTTTAATAGCAAGGCACCTTCACCTGTTGCCGTTCAATCGGAGGATCACCACTAACACCACCACCATCACCATGTCGGCATCATCATCTGCTTTCAGCACACCCAGATTGGTCCTCAAGAAGGTTCTGGCCAAGTCTCAACGCGAAGGCGATGGGGCTGTTGTCAGAAGAGGCATTGGAAGAAGCGAGTTGAAGAACTTGGATCCATTTTTGATGTTGGATCACTTCTCAGTATCCCCCCCTGGAGGATTCCCTGATCATCCCCACAGAGGTTTTGAGACCGTTACCTACGTCCTAGAGGGGGGCATAACTCACCAAGATTTTGCAGGGCACCAGGGCACAATCAGAGCTGGCGATGTTCAGTGGATGACTGCAGGCAGGGGAATCATTCACTCTGAGATGCCTGCCCAACCAACCAACAACAACGGCTTGCAGCTATGGATCAACTTATCCGCCAACAACAAGATGATTGAACCCAACTACCAAGAACTTCTGAGCGAGAACATACCAACGGCAGAGCAGGAAGGGGTGGAGGTGAGAGTGATAGCAGGAGAAGCAATGGGGGTGCATTCCCCGGTCTATACTCGAACTCCAACCATGTTCCTTGACTTCAAGCTACGTCCCGGAGCTGAGTTGCATCAGAGCATTCCGGAGACATGGAACTCCTTTGTATACGTCATTGAAGGTGAAGGAGTGTTCGGGTCTCCAACTTCATCGCCAACTGGCCCATACCATGTGCTGGTTCTGAGCCAAGGGGATGGCCTCAGCGTCTGGAACAACAACAACAACTTCTCTTCAAAGCCTCTCAGGTTTGTGCTCATTGGAGGCCAGCCACTGAACGAGCCCGTGGCTCAGTATGGCCCTTTTGTCATGAACACACAGTCTGAGATCGAAAAGACCATTGAGGACTATCAGTATTGCAGGAATGGCTTTGAGATGAGGAGGTATTGGACCTCTCTCTAG 969 0.5098 MRGLIARHLHLLPFNRRITTNTTTITMSASSSAFSTPRLVLKKVLAKSQREGDGAVVRRGIGRSELKNLDPFLMLDHFSVSPPGGFPDHPHRGFETVTYVLEGGITHQDFAGHQGTIRAGDVQWMTAGRGIIHSEMPAQPTNNNGLQLWINLSANNKMIEPNYQELLSENIPTAEQEGVEVRVIAGEAMGVHSPVYTRTPTMFLDFKLRPGAELHQSIPETWNSFVYVIEGEGVFGSPTSSPTGPYHVLVLSQGDGLSVWNNNNNFSSKPLRFVLIGGQPLNEPVAQYGPFVMNTQSEIEKTIEDYQYCRNGFEMRRYWTSL 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04419 322 Gene3D Jelly Rolls 51 307 IPR014710 -
Arst4g04419 322 Pfam Pirin C-terminal cupin domain 203 312 IPR008778 -
Arst4g04419 322 SUPERFAMILY RmlC-like cupins 38 319 IPR011051 -
Arst4g04419 322 CDD cupin_pirin_C 200 280 - -
Arst4g04419 322 Pfam Pirin 58 150 IPR003829 -
Arst4g04419 322 CDD cupin_pirin_N 55 152 - -
Arst4g04419 322 Gene3D Jelly Rolls 172 281 IPR014710 -
Arst4g04419 322 FunFam pirin 51 188 - -
Arst4g04419 322 PANTHER PIRIN-RELATED 28 321 IPR012093 -
Arst4g04419 322 PIRSF Pirin 36 320 IPR012093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04419 Arst-Chr4 121844973 121846843 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04419 35 317 Calmodulin-binding Proteins AT3G59220 61.972 8.62e-131 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04419 K06911 - gmx:100802145 508.834