Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04418 ATGAGAGGTTTAATAGCAAGGCACCTTCACCTGTTGCCGTTCAATCGGAGGATCACCACTAACACCACCACCATCACCATGTCGGCATCATCATCTGCTTTCAGCACACCCAGATTGGTCCTCAAGAAGGTTCTGGCCAAGTCTCAACGCGAAGGCGATGGGGCTGTTGTCAGAAGAGGCATTGGAAGCGAGTTGAAGAACTTGGATCCATTTTTGATGTTGGATCACTTCTCAGTATCCCCCCCTGGAGGATTCCCTGATCATCCCCACAGAGGTTTTGAGACCGTTACCTACGTCCTAGAGGGGGGCATAACTCACCAAGATTTTGCAGGGCACCAGGGCACAATCAGAGCTGGCGATGTTCAGTGGATGACTGCAGGCAGGGGAATCATTCACTCTGAGATGCCTGCCCAACCAACCAACAACAACGGCTTGCAGCTATGGATCAACTTATCCGCCAACAACAAGATGATTGAACCCAACTACCAAGAACTTCTGAGCGAGAACATACCAACGGCAGAGCAGGAAGGGGTGGAGGTGAGAGTGATAGCAGGAGAAGCAATGGGGGTGCATTCCCCGGTCTATACTCGAACTCCAACCATGTTCCTTGACTTCAAGCTACGTCCCGGAGCTGAGTTGCATCAGAGCATTCCGGAGACATGGAACTCCTTTGTATACGTCATTGAAGGTGAAGGAGTGTTCGGGTCTCCAACTTCATCGCCAACTGGCCCATACCATGTGCTGGTTCTGAGCCAAGGGGATGGCCTCAGCGTCTGGAACAACAACAACAACTTCTCTTCAAAGCCTCTCAGGTTTGTGCTCATTGGAGGCCAGCCACTGAACGAGCCCGTGGCTCAGTATGGCCCTTTTGTCATGAACACACAGTCTGAGATCGAAAAGACCATTGAGGACTATCAGTATTGCAGGAATGGCTTTGAGATGAGGAGGTATTGGACCTCTCTCTAG 966 0.5104 MRGLIARHLHLLPFNRRITTNTTTITMSASSSAFSTPRLVLKKVLAKSQREGDGAVVRRGIGSELKNLDPFLMLDHFSVSPPGGFPDHPHRGFETVTYVLEGGITHQDFAGHQGTIRAGDVQWMTAGRGIIHSEMPAQPTNNNGLQLWINLSANNKMIEPNYQELLSENIPTAEQEGVEVRVIAGEAMGVHSPVYTRTPTMFLDFKLRPGAELHQSIPETWNSFVYVIEGEGVFGSPTSSPTGPYHVLVLSQGDGLSVWNNNNNFSSKPLRFVLIGGQPLNEPVAQYGPFVMNTQSEIEKTIEDYQYCRNGFEMRRYWTSL 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04418 321 PANTHER PIRIN-RELATED 28 320 IPR012093 -
Arst4g04418 321 Pfam Pirin 62 149 IPR003829 -
Arst4g04418 321 Gene3D Jelly Rolls 51 306 IPR014710 -
Arst4g04418 321 CDD cupin_pirin_N 55 151 - -
Arst4g04418 321 Gene3D Jelly Rolls 171 280 IPR014710 -
Arst4g04418 321 FunFam pirin 51 187 - -
Arst4g04418 321 SUPERFAMILY RmlC-like cupins 38 318 IPR011051 -
Arst4g04418 321 Pfam Pirin C-terminal cupin domain 202 311 IPR008778 -
Arst4g04418 321 CDD cupin_pirin_C 199 279 - -
Arst4g04418 321 PIRSF Pirin 36 319 IPR012093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04418 Arst-Chr4 121844972 121846843 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04418 35 316 Calmodulin-binding Proteins AT3G59220 61.972 7.92e-129 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04418 K06911 - gmx:100802145 502.286