Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04356 ATGTTCACCTCAAGGAAGAAAATCCACAAGGATAATGATGCTGAACCCACTGAGTTTGAGGAGACAGCTGCACAGTACTTGTTTGATTTGGAGAACACTAATCAGGACCTGAAAAGTGATTTGAAAGATCTCTACATAAACCAGGCAATTCCGATGGACGTGGCTGGGAATCGCAAGGCTGTGGTCATTTATGTTCCTTTCAGATTGAGGAAGTCGTTCCGCAAGATTCATCTTCGTCTTGTCAGGGAGCTTGAGAAGAAGTTTAGTGGGAAGGATGTTGTGTTGGTCGCCACAAGAAGGATCGTGCGTCCTCCAAAGAAAGGGTCTGCTGTTCAGCGGCCGCGTACCCGCACTTTGACTGCTGTGCACGATGCTATTCTTGAAGACGTAGTTTATCCTGCCGAGATTGTTGGCAAACGAGTCAGATACAGACTCGATGGATCGAAAATAATCAAAGTTTTCTTGGATCCGAAGGAACGCAACAACACTGAATACAAGCTGGAGACTTTCTCTGGAGTTTACAGGAAGCTTACCGGGAAAGATGTATCTTTTGAGTTTCCTATCTCAGAAGCCTAG 576 0.4549 MFTSRKKIHKDNDAEPTEFEETAAQYLFDLENTNQDLKSDLKDLYINQAIPMDVAGNRKAVVIYVPFRLRKSFRKIHLRLVRELEKKFSGKDVVLVATRRIVRPPKKGSAVQRPRTRTLTAVHDAILEDVVYPAEIVGKRVRYRLDGSKIIKVFLDPKERNNTEYKLETFSGVYRKLTGKDVSFEFPISEA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04356 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Arst4g04356 191 PANTHER 40S RIBOSOMAL PROTEIN S7 1 190 IPR000554 GO:0003735|GO:0005840|GO:0006412
Arst4g04356 191 Coils Coil 27 47 - -
Arst4g04356 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04356 Arst-Chr4 121412876 121414707 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04356 1 191 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 78.534 1.26e-112 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04356 K02993 - gmx:100500684 359.377