Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04332 ATGGCATACTTGAAATCAAGATGGAAAAATGGGATTATTAGTAATTTGTGTATGGTTGTGGTGTGCATCATGGGTTGTGTGGAGTCCAACGATGATGAAGCTGCATACATGTTGAAGCTTCTCAATGCACTCAAACCCCCTGGCTGGTCCAACACCACTCACATGTGCCAGTGGATTGGCGTGAATTGCAACGATCAAAGTGGAAGGATTGAAGAGATCCATCTCAGTTCAATGTCGCTGACGGGAACAGTTCCTGAAGGCCTCAACGACTCCCTCTCCCAACTCGTAAACCTCTATCTCTTCAACAATAATCTGAGTGGGCCTGTTCCCTCTCTCGCCAACCTCTCCTTCCTCCAACAAGTGTACCTCGACAACAACAACTTCACCACCATCCCTCATGGTTGCTTCCATGGTCTTACTACTTTGCAGATTTTGAGCTTGAGTAGCAATACCAACCTCGCACCATGGAACTTTCCTATCGATTTGACTCCTCACTCCTCCCAACTCTATCAACTCGACCTGTCCTCTACAAATCTCAAAGGCTCCATACCACCAAATATATCCCATTCCTTCCCAACTCTGCTATCTCTTGATCTCTCTAACAACAACCTCTCCTCCATCCCTGAGGGTTGCTTCCACAACCTAACCAGTTTGGGTGGCCTCTCTTTGGCCAACAACACCAACCTCCCACCATGGACCTTCCCCCTCGATTTGACTCATTCCTCATTGCAACTCTCTTACCTCCAACTCGAGGCTACAAATCTCATGGGATCCCTACCAAACTTGTCTCGTTTTTTCCCCAACTTGAAAAGCGTTACTCTCTCCAACAACAACCTTACCTCCATCCCCCAAGGTTGCTTCCAGGGTCTACCCTCTTTGACGTGGCTGTGGTTGGAAAACAACACCAACCTCACACCATGGACCTTCCCCGACTTGACTCAGTCCACACAACTGAAAGAGCTCAAACTTGCTGCTACAAATGTCATGGGCCCTCTACCAGAAATATTTGACTCCTTGACAAGTTTAGAGACTCTTCTTCTCTCCAACAACAGCCTCACTGGTGTCTTGCCTGAGTCTTTTGGAAGGTCCAAGATTGCCACCTTGCATCTCAACAACCAGAAGGATCACGGCATGTCAGGTACAATTGATGTCCTCTCAAACATGCTCGACTTATCTCAAGCATGGCTCCAGGGAAACTCGTTTACAGGACCTATTCCTGACATGTCTCATTGCACCTCCTTACAAGATTTACAACTTGACCACAATCAATTAACAGGTGTGGTCCCAGATTCTCTCATCGCTCTTCCAAACTTGGAATATCTTTATTTGGGCTATAACTTTTTGCAAGGTCCTCTACCAAATCTTACCTTCGGTGATTTTGATAGTATGGAGAATCTTGGTGTTAACACCACAAATGGCTTCTGTCACAAACATCCAGGACCTTGTGATCACAAAGTGACCATTTTGCTTCAAATTGCTGCGGAATTCAAGTATCCAATTATGTTGGCACGTACATGGAGAGGAAATAATGCCTGTAAAAACTGGAGTTTCATTACATGTGATGACAAAAATAAGATCAGAATGGTCAATTTATCAAATCTGAAACTGACGGGCACAATCTCACCTGCATTCGCCAATTTAACTGATTTGTGGAAATTGTATTTGGATGGGAATAATTTGACAGGTGAAATACCTGAAGGATTGACAACATTGCCTGAACTTGAAGTTGTGAATGTCTCTAACAACCACCTTGCAGGAAATATTCCCAAATTCTCAGCAAAGGTCAACTTTATTGTCACAGACAATGATTTTCCTAATGCTTCCTACAATAGAATCTCAACTCCTTTGATTACAGTTATGTCGATAACTAGTGCTGGAGTTATTATAATACTTGTTTTGGTTATTTATAACCGCAAGAGGTGCCTTCATTTAATCCATCGAGTTATCTTCAAGACAACATACAATGACCACAACATCGAGGATTTTATAAAAGGTTATGAATTTTTGGCACCAAAGCGATCTAGTTATTTCGAAGTGAAAAGAATGACAAACTCATTTCGTGATAAACTAGGACAAGGTGGATATGGCACTGTATACAAAGCAAGTTTAACGGATGGTCGTCAAGTTGCGGTAAAGATATTAAGTGAATCTAAAGGAAGCGGGGAAGAATTCATAAATGAAGTTGCTAGTATTAGTAGAACATCTCATGTGAATATTGTCTCACTTTTAGGATTTTGTTATGATCAAGGCAAAAGAGCACTCATTTATGAATTCATGCCTAATGGTTATCTGGATAAATACATCTACAAAGCAAAATCTGTCGAAGCTTTTTGTAGTTTGGATTGGAGTGTTTTGTACAACATTGCAATTGGTATTGCTCAAGGGTTAGAATACTTGCATCAAGGATGCACAACAAAAATTTTGCATCTTGATATAAAACCTGAAAACATTCTTCTAGATGAACATTTTTGTCCAAAAATCTCAGATTTCGGATTAGCTCGAATATGTCAAAAGAAAGAGAGTAATGTATCTATTTTAGGCACAAGAGGAACTCCAGGTTACATTGCACCAGAAATCTTTAGTCGAGCATATGGTAGAATTTCTGATAAATCTGATGTATATAGTTATGGTATGTTGATTCTTGAGATGTTCGGAAAAAGAAAAAACTTCAACAATAAAGAATCACATCGCAGTGAAATGTATTTTCCTGATTGGATATATGAAGATCTTGATCAAGGTAATAATATTCTTGGTAATCACTCCGATATTTCAGACGAAGATAATGATATGATAAAGAAGATTATATTAGTAAGTTTGTGGTGTATTCAACCAAATCCAGCACATAGGCCATCAATGAGTAAAGTTGTGGAAATGCTGCATGGAGAACTTGAGTCCGTGCCATTTCCTCCAAAGCCTGTGTTGTATTCTCCTGAAAGGTCTCAGTTAGAAATTTTAGATACATCTTCTAGTAGCAAGCATGAGACAATTTTAACAACTACAGAGGAGAGTAGTTCAATACATGAGATCAACAAAAATGTCTCATGTTAA 3048 0.4035 MAYLKSRWKNGIISNLCMVVVCIMGCVESNDDEAAYMLKLLNALKPPGWSNTTHMCQWIGVNCNDQSGRIEEIHLSSMSLTGTVPEGLNDSLSQLVNLYLFNNNLSGPVPSLANLSFLQQVYLDNNNFTTIPHGCFHGLTTLQILSLSSNTNLAPWNFPIDLTPHSSQLYQLDLSSTNLKGSIPPNISHSFPTLLSLDLSNNNLSSIPEGCFHNLTSLGGLSLANNTNLPPWTFPLDLTHSSLQLSYLQLEATNLMGSLPNLSRFFPNLKSVTLSNNNLTSIPQGCFQGLPSLTWLWLENNTNLTPWTFPDLTQSTQLKELKLAATNVMGPLPEIFDSLTSLETLLLSNNSLTGVLPESFGRSKIATLHLNNQKDHGMSGTIDVLSNMLDLSQAWLQGNSFTGPIPDMSHCTSLQDLQLDHNQLTGVVPDSLIALPNLEYLYLGYNFLQGPLPNLTFGDFDSMENLGVNTTNGFCHKHPGPCDHKVTILLQIAAEFKYPIMLARTWRGNNACKNWSFITCDDKNKIRMVNLSNLKLTGTISPAFANLTDLWKLYLDGNNLTGEIPEGLTTLPELEVVNVSNNHLAGNIPKFSAKVNFIVTDNDFPNASYNRISTPLITVMSITSAGVIIILVLVIYNRKRCLHLIHRVIFKTTYNDHNIEDFIKGYEFLAPKRSSYFEVKRMTNSFRDKLGQGGYGTVYKASLTDGRQVAVKILSESKGSGEEFINEVASISRTSHVNIVSLLGFCYDQGKRALIYEFMPNGYLDKYIYKAKSVEAFCSLDWSVLYNIAIGIAQGLEYLHQGCTTKILHLDIKPENILLDEHFCPKISDFGLARICQKKESNVSILGTRGTPGYIAPEIFSRAYGRISDKSDVYSYGMLILEMFGKRKNFNNKESHRSEMYFPDWIYEDLDQGNNILGNHSDISDEDNDMIKKIILVSLWCIQPNPAHRPSMSKVVEMLHGELESVPFPPKPVLYSPERSQLEILDTSSSSKHETILTTTEESSSIHEINKNVSC 1015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04332 1015 Gene3D Ribonuclease Inhibitor 483 605 IPR032675 -
Arst4g04332 1015 SMART LRR_typ_2 115 138 IPR003591 -
Arst4g04332 1015 SMART LRR_typ_2 411 434 IPR003591 -
Arst4g04332 1015 SMART LRR_typ_2 266 289 IPR003591 -
Arst4g04332 1015 SMART LRR_typ_2 215 236 IPR003591 -
Arst4g04332 1015 SMART LRR_typ_2 191 214 IPR003591 -
Arst4g04332 1015 SMART LRR_typ_2 339 362 IPR003591 -
Arst4g04332 1015 SMART LRR_typ_2 435 459 IPR003591 -
Arst4g04332 1015 SMART LRR_typ_2 547 571 IPR003591 -
Arst4g04332 1015 SMART LRR_typ_2 290 311 IPR003591 -
Arst4g04332 1015 SMART serkin_6 684 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04332 1015 SUPERFAMILY RNI-like 61 325 - -
Arst4g04332 1015 SUPERFAMILY Protein kinase-like (PK-like) 666 959 IPR011009 -
Arst4g04332 1015 ProSiteProfiles Protein kinase domain profile. 684 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04332 1015 Pfam Leucine rich repeat N-terminal domain 31 64 IPR013210 -
Arst4g04332 1015 Pfam Leucine rich repeat N-terminal domain 488 521 IPR013210 -
Arst4g04332 1015 Gene3D Ribonuclease Inhibitor 30 235 IPR032675 -
Arst4g04332 1015 Gene3D Ribonuclease Inhibitor 236 465 IPR032675 -
Arst4g04332 1015 Gene3D Phosphorylase Kinase; domain 1 661 758 - -
Arst4g04332 1015 Gene3D Transferase(Phosphotransferase) domain 1 759 966 - -
Arst4g04332 1015 FunFam PR5-like receptor kinase 759 970 - -
Arst4g04332 1015 Pfam Protein kinase domain 688 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04332 1015 ProSitePatterns Protein kinases ATP-binding region signature. 690 712 IPR017441 GO:0005524
Arst4g04332 1015 ProSiteProfiles Leucine-rich repeat profile. 268 289 IPR001611 GO:0005515
Arst4g04332 1015 ProSiteProfiles Leucine-rich repeat profile. 193 214 IPR001611 GO:0005515
Arst4g04332 1015 MobiDBLite consensus disorder prediction 993 1015 - -
Arst4g04332 1015 Pfam Leucine Rich Repeat 341 361 IPR001611 GO:0005515
Arst4g04332 1015 Pfam Leucine rich repeat 168 226 IPR001611 GO:0005515
Arst4g04332 1015 Pfam Leucine rich repeat 118 151 IPR001611 GO:0005515
Arst4g04332 1015 Pfam Leucine rich repeat 411 446 IPR001611 GO:0005515
Arst4g04332 1015 Pfam Leucine rich repeat 245 301 IPR001611 GO:0005515
Arst4g04332 1015 ProSitePatterns Serine/Threonine protein kinases active-site signature. 807 819 IPR008271 GO:0004672|GO:0006468
Arst4g04332 1015 FunFam Leucine-rich repeat receptor-like kinase 484 608 - -
Arst4g04332 1015 PANTHER OSJNBA0070M12.3 PROTEIN 244 964 - -
Arst4g04332 1015 PRINTS Leucine-rich repeat signature 339 352 - -
Arst4g04332 1015 PRINTS Leucine-rich repeat signature 194 207 - -
Arst4g04332 1015 SUPERFAMILY L domain-like 244 592 - -
Arst4g04332 1015 CDD STKc_IRAK 690 959 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04332 Arst-Chr4 121190682 121194426 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04332 652 988 Receptor kinase-like Gene Family AT5G38280 56.560 6.88e-124 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst4g04332 Pkinase 7.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04332 - K00924 aip:107635702 1280.77