Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04327 ATGTGGAATTTTCCTGCCCATTTAACTCTTTACTCTTCCCAACTCCAATACCTCGAACTCGATGACACCAATCTCATGGGCTCCTTGCCAAACATATCCCATTCCTTCCCAACTATCAGATGGCTTTTTCTCTCTAACAACAACCTCTCCTCCATTCCTGAGGGTTGCTTCCACAACCTAACCAGTTTGGGGGTCCTCTCTTTAGCCAACAACACCAACCTCCCACCATGGACCTTCCCCCTCCACTTGACTCGTTCCTCCTCATTGATATCCCTTGACCTCGAGTCCACAAATCTTATGGGATCACTACCAAACTTATCTCATTTCTTCCCCTACTTGGACACTGTTCAACTCTCCAACAACAACCTTACCTTCCTTCCCCAAGGTTGCTTCCAGGGTCTACCCAGTTTGCAGAGGCTCAAGTTGGGAAGCAACACCAACCTTGCACCATGGACCTTCCCCAACTTCACTCACTCCACAGAACTGGAAGACCTCAATCTTGTTGCTACAAATGTAATAGGCTTCCTACCAGCAGACATGCTAAAATCGTTGCCGAACTTGCAAACAATTCTTCTCTCCAACAACCACCTTACTGGGGTCTTGCCAGAGTCTTTCGGAGGATCTAAGGTTGTCACACTGCATCTCAACGATAATGGGTTTTGGGGTACAATAGATATCCTTTCAACCATGGTCGACTTGTCTGAAGCTTGGCTTCAGGGAAACTTCTTTGAAGGCCCAATTCCTGACTTGTCCCGTTCTACAGCTTTGCAAGATTTGCAACTTGCCCGCAACCGATTAACAGGTGTCGTTCCAAATTCTCTAACAACACTCGATTCGCTGCGAAGTATTTCTTTGAACGACAACTTTTTGCAAGGTCCTTTGCCCAAATTTGACCTTTTTTCTGAGGAGGATGTGAATCTTGGTGTTAACACAACAAATGGCTTTTGTCACAGAGATCCTGGACCTTGTGATCGCAAAGTGACCATTTTGCTTCAAATTGCTGCGGAATTTAAGTATCCACTTCAGTTGGCACGTTCATGGAAAGGAAATAATGCCTGTAAAGGTTGGCGTTTCATTACGTGTGATGACAAAAATAAGATCAGAATGGTGAATTTATCAAATCTGAAATTGACGGGCACAATCTCTCCTGCATTCGCCAATTTAACTGATTTGCGGGAATTGCATTTGGATGGCAATAATTTGACGGGTGAAATACCTCAAGGATTGGCAACATTGCCTGAACTAGAAGTTGTGAATGTCTCTAACAACCACCTTGCTGGAAATATTCCCAAATTCTCACCAAAGGTCAACTTTATTGCCACAGGCAATGATTTTCCTAATGCTTCCCACCATAGAATCTCAACTCCTTTCATTACAGTTATGTCGATAACTAGTGCTGGAGTTATTATAATACTTGTTTTGGTTATTTATAACCGCAAGAGGTGCCTTCATTTAATCCATCGAGTTATCTTCAAGACAACATACAATGACCACAACATCGAGGATTTTATAAAAGGTTATGAATTTTTGGCACCCAAGCGATCTAGTTATTCCGAAGTGAAAAGAATGACAAATTCATTTCGTGATAAATTAGGACAAGGTGGATATGGCACTGTATACAAAGCAAGTTTAACTGATGGTCGTCAGGTTGCAGTAAAAATATTAAGTGAATCTAAGGGAAGCGGAGAAGAATTCATAAATGAAGTTGCTAGTATTAGTAGGACATCTCATGTGAATATTGTCTCACTTTTAGGATTTTGTTATGATCAAGGCAAAAGAGCACTCATTTATGAATTCATGCCTAATGGTTCTCTAGATAAATACATCTACAAAGCAAAATCTCCCGAAACTTTTTGTAGTTTGGATTGGAGTATTTTGTACAACATTGCAATTGGTATTGCACAAGGGTTAGAATACTTGCATCAAGGATGCACAACAAAAATTTTGCATCTTGATATAAAACCTGAAAACATTATTCTAGATGAACATTTTTGTCCAAAAATCTCAGATTTTGGATTAGCTCGAATCTGTCAAAAGAAAGAGAGTAATGTATCTATTTTAGGCACAAGAGGAACTCCAGGTTACATTGCACCAGAAATCTTTAGTCGAGCATACGGTAGAATTTCTGATAAATCTGATGTATATAGTTATGGTATGTTGATTCTTGAGATGTTCGAAAAAAGAAAAAACTTCAACAATAAAGAATCGCATCGCAGTGAAATGTATTTTCCTGATTGGATATATGAAGATCTTGATCAAAGTAATATTCTTGGTAGACACTCCGATATTTCAGATGAAGATAATGATATGATAAAGAAGATTATATTAGTAAGTTTGTGGTGTATTCAACCAAATCCAGCACATAGGCCATCAATGAGTAAAGTTGTGGAAATGTTGCATGGAGAACTTGAGTCCGTGCCATTTCCTCCAAAGCCTGTGTTGTATTCTCCTGAAAGGTCTCAGTTAGAAATTTTAGATACATCTTCTAGTAGCAAGCATGAGACAATTTTAACAACCACAGAGGAAAGTAGTTCCATACATGAGATCAATAAAAATGTCTCATGTTAA 2568 0.3949 MWNFPAHLTLYSSQLQYLELDDTNLMGSLPNISHSFPTIRWLFLSNNNLSSIPEGCFHNLTSLGVLSLANNTNLPPWTFPLHLTRSSSLISLDLESTNLMGSLPNLSHFFPYLDTVQLSNNNLTFLPQGCFQGLPSLQRLKLGSNTNLAPWTFPNFTHSTELEDLNLVATNVIGFLPADMLKSLPNLQTILLSNNHLTGVLPESFGGSKVVTLHLNDNGFWGTIDILSTMVDLSEAWLQGNFFEGPIPDLSRSTALQDLQLARNRLTGVVPNSLTTLDSLRSISLNDNFLQGPLPKFDLFSEEDVNLGVNTTNGFCHRDPGPCDRKVTILLQIAAEFKYPLQLARSWKGNNACKGWRFITCDDKNKIRMVNLSNLKLTGTISPAFANLTDLRELHLDGNNLTGEIPQGLATLPELEVVNVSNNHLAGNIPKFSPKVNFIATGNDFPNASHHRISTPFITVMSITSAGVIIILVLVIYNRKRCLHLIHRVIFKTTYNDHNIEDFIKGYEFLAPKRSSYSEVKRMTNSFRDKLGQGGYGTVYKASLTDGRQVAVKILSESKGSGEEFINEVASISRTSHVNIVSLLGFCYDQGKRALIYEFMPNGSLDKYIYKAKSPETFCSLDWSILYNIAIGIAQGLEYLHQGCTTKILHLDIKPENIILDEHFCPKISDFGLARICQKKESNVSILGTRGTPGYIAPEIFSRAYGRISDKSDVYSYGMLILEMFEKRKNFNNKESHRSEMYFPDWIYEDLDQSNILGRHSDISDEDNDMIKKIILVSLWCIQPNPAHRPSMSKVVEMLHGELESVPFPPKPVLYSPERSQLEILDTSSSSKHETILTTTEESSSIHEINKNVSC 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04327 855 Gene3D Ribonuclease Inhibitor 81 313 IPR032675 -
Arst4g04327 855 Pfam Protein kinase domain 529 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04327 855 SUPERFAMILY RNI-like 18 430 - -
Arst4g04327 855 Gene3D Phosphorylase Kinase; domain 1 501 599 - -
Arst4g04327 855 Gene3D Transferase(Phosphotransferase) domain 1 600 806 - -
Arst4g04327 855 FunFam serine/threonine-protein kinase PBS1-like 496 599 - -
Arst4g04327 855 FunFam Leucine-rich repeat receptor-like kinase 325 449 - -
Arst4g04327 855 SUPERFAMILY Protein kinase-like (PK-like) 507 799 IPR011009 -
Arst4g04327 855 Pfam Leucine rich repeat 14 71 IPR001611 GO:0005515
Arst4g04327 855 Pfam Leucine rich repeat 111 146 IPR001611 GO:0005515
Arst4g04327 855 Pfam Leucine rich repeat 161 219 IPR001611 GO:0005515
Arst4g04327 855 ProSiteProfiles Protein kinase domain profile. 525 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04327 855 SMART LRR_typ_2 60 81 IPR003591 -
Arst4g04327 855 SMART LRR_typ_2 184 207 IPR003591 -
Arst4g04327 855 SMART LRR_typ_2 388 412 IPR003591 -
Arst4g04327 855 SMART LRR_typ_2 36 59 IPR003591 -
Arst4g04327 855 SMART LRR_typ_2 134 155 IPR003591 -
Arst4g04327 855 SMART LRR_typ_2 110 133 IPR003591 -
Arst4g04327 855 FunFam PR5-like receptor kinase 600 810 - -
Arst4g04327 855 PANTHER OSJNBA0070M12.3 PROTEIN 13 124 - -
Arst4g04327 855 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Arst4g04327 855 ProSitePatterns Protein kinases ATP-binding region signature. 531 553 IPR017441 GO:0005524
Arst4g04327 855 Gene3D Ribonuclease Inhibitor 3 80 IPR032675 -
Arst4g04327 855 SMART serkin_6 525 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04327 855 ProSiteProfiles Leucine-rich repeat profile. 38 59 IPR001611 GO:0005515
Arst4g04327 855 Gene3D Ribonuclease Inhibitor 324 445 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04327 Arst-Chr4 121141279 121144967 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04327 493 828 Receptor kinase-like Gene Family AT5G38280 56.305 5.33e-125 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst4g04327 Pkinase 4.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04327 - K00924 aip:107635702 1046.57