Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04325 ATGAAACCTCTTTGTCGTCTTGGCCGCCTCTCTTGCATATGGATGTTCATCTTGGCTCTTATTGCCATGGCAACCCACGTTCCAACATCTGTAGGTGCTGCTGATAACGTTGATTACTTGGCGTGCAAGAACACTTTAAGCTGTGGAACCGTCAACCAACTCACTTACCCTTTCTGGGGTCAAATTGACAACACTAATAACAGGCCAAACTCTTGCGGTGAGCCTAACTTGCAGATCACATGTGAAGATAAAAACAATAATAATGGGGTCCCAAAGTTCACAGTGGATTCTGTCAAATACAGGATTCTTGATTGGGACGTCGGTAAACAGAATCTGACAGTTGCTAGGGACGATTACTTTAGTACTAGCTTTGATTTCTGTTCAGGAGATTTCAGCAACAACACCTTGGGTGAAACCATACTTCAATATGATGATAACAGTGTTGTTAATATCACACTCTTGTACAATTGTTCTTCAGAAACAAAGCCTTCTTCGGATCAGTTTACGTTTGTTCAAAGTTGCAACAGCGGTAGTGTCTACTATGCTGAACAAGATGATAATAAGGCGCTGCCTTATTATGAAGGTTGCAGCACTGTTATTTTTCCTGTTTCAAAGTCCCTAGCTTCGGCTTTTGCTAACAGTGCCAGTAACCCTATTACTACAATAATTCAGCAAGCGTTGCAAAGTGGTTTTGTCTTGAAATTATTGCCTCAAATCAATGATAAGTGCAGCGGATGCACTAACTCAGGTGGCAATTGTGGCAGCAATGATGGACATTTCGTCTGTTACTGTAACGATGGAACTCATTCTAACTCTTGTTCATCATTAGGATCATCTTCAAAGTGGAACTGGCGGCTTAAGACAGCTATAGGTGCAACAGCAGCAGGTGTTGGAATTGTTGTAGTCTTTGCTGTGATCATTTGCAACCGCAAGAGATACTTCAGTTTAACACAAAGGAGGTTAATCTTTGAAAAAACAGGGGAATCTGATGACCAGAATGTGGAGGATTTCATCACAACTTATGGCTTTCTGGCTCCAAAGAGATATAGTTTTTCAGAAGTGAAGAAAATCACAAACTCATTTTGTGATCAATTAGGCAAAGGGGGATATGGTGTTGTGTACAAAGGGAAGTTATCTGATGGTCGTCTTGTTGCAGTGAAAGTGATAAATGAATCAAAAGGGAGTGGAGAAGAATTCATAAACGAAGTTGCTAGTATTAGCAGAACCTCTCATGTGAATATTGTCTCGCTTTTAGGATTTTGCAATGAGAGAAACAAAAGAGCACTTATTTATGAGTTCATGTTTAATAGCTCATTGGATAAGTTCATTTATGGAAATGGATCTCCAACTCCTACTTGCAATTTGGATTGGAACACATTGTATCAAATTGCAATTGGCATAGCTCGCGGACTAGAATATTTGCATCGAGGATGCGGTACAAGAATTTTACATCTTGATATTAAACCTCAAAATATTCTCTTGGATGAAGATTTTTGTCCTAAAATTTCTGATTTTGGATTAGCCAAGATATGTCAAAAGAAAGAGAGTATTGTGTCCATATTGGGAACAAGAGGAACTATTGGATATATTGCACCTGAAGTATTTAGTCGCATGTATGGTGGTGTTTCGCACAAATCTGATGTATATAGTTATGGCATGTTAATTCTTGAAATGGTTGGAGGAAGAAAAAACTACGAGAGTGGACGGTCAAATTCCAGCGAGATGTACTTTCCAGACTGGATTTACAAAGATCTTGAGCAAGCAACATGGATGATGAGTCTTCAATGA 1788 0.3926 MKPLCRLGRLSCIWMFILALIAMATHVPTSVGAADNVDYLACKNTLSCGTVNQLTYPFWGQIDNTNNRPNSCGEPNLQITCEDKNNNNGVPKFTVDSVKYRILDWDVGKQNLTVARDDYFSTSFDFCSGDFSNNTLGETILQYDDNSVVNITLLYNCSSETKPSSDQFTFVQSCNSGSVYYAEQDDNKALPYYEGCSTVIFPVSKSLASAFANSASNPITTIIQQALQSGFVLKLLPQINDKCSGCTNSGGNCGSNDGHFVCYCNDGTHSNSCSSLGSSSKWNWRLKTAIGATAAGVGIVVVFAVIICNRKRYFSLTQRRLIFEKTGESDDQNVEDFITTYGFLAPKRYSFSEVKKITNSFCDQLGKGGYGVVYKGKLSDGRLVAVKVINESKGSGEEFINEVASISRTSHVNIVSLLGFCNERNKRALIYEFMFNSSLDKFIYGNGSPTPTCNLDWNTLYQIAIGIARGLEYLHRGCGTRILHLDIKPQNILLDEDFCPKISDFGLAKICQKKESIVSILGTRGTIGYIAPEVFSRMYGGVSHKSDVYSYGMLILEMVGGRKNYESGRSNSSEMYFPDWIYKDLEQATWMMSLQ 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04325 595 FunFam PR5-like receptor kinase 434 595 - -
Arst4g04325 595 Pfam Wall-associated receptor kinase galacturonan-binding 42 115 IPR025287 GO:0030247
Arst4g04325 595 FunFam S-receptor-like serine/threonine-protein kinase 328 433 - -
Arst4g04325 595 ProSiteProfiles Protein kinase domain profile. 359 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04325 595 Gene3D Phosphorylase Kinase; domain 1 333 433 - -
Arst4g04325 595 Pfam Wall-associated receptor kinase C-terminal 182 267 IPR032872 -
Arst4g04325 595 Pfam Protein kinase domain 363 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04325 595 Gene3D Transferase(Phosphotransferase) domain 1 434 594 - -
Arst4g04325 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 482 494 IPR008271 GO:0004672|GO:0006468
Arst4g04325 595 PANTHER RUST RESISTANCE KINASE LR10-RELATED 331 588 IPR045874 GO:0004672
Arst4g04325 595 ProSitePatterns Protein kinases ATP-binding region signature. 365 387 IPR017441 GO:0005524
Arst4g04325 595 SUPERFAMILY Protein kinase-like (PK-like) 337 579 IPR011009 -
Arst4g04325 595 SMART serkin_6 359 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04325 Arst-Chr4 121124725 121127508 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04325 13 590 Receptor kinase-like Gene Family AT5G38260 41.402 1.61e-135 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst4g04325 Pkinase 4.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04325 - - adu:107486803 1115.14