Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04323 ATGAAACCTCTTTGTCGTCTTGGCCGCCTCTCTTGCATATGGATGTTCATCTTGGCTCTTATTGCCATGGCAACCCACGTTCCAACATCTGTAGGTGCTGCTGATAACGTTGATTACTTGGCGTGCAAGAACACTTTAAGCTGTGGAACCGTCAACCAACTCACTTACCCTTTCTGGGGTCAAATTGACAACACTAATAACAGGCCAAACTCTTGCGGTGAGCCTAACTTGCAGATCACATGTGAAGATAAAAACAATAATAATGGGGTCCCAAAGTTCACAGTGGATTCTGTCAAATACAGGATTCTTGATTGGGACGTCGGTAAACAGAATCTGACAGTTGCTAGGGACGATTACTTTAGTACTAGCTTTGATTTCTGTTCAGGAGATTTCAGCAACAACACCTTGGGTGAAACCATACTTCAATATGATGATAACAGTGTTGTTAATATCACACTCTTGTACAATTGTTCTTCAGAAACAAAGCCTTCTTCGGATCAGTTTACGTTTGTTCAAAGTTGCAACAGCGGTAGTGTCTACTATGCTGAACAAGATGATAATAAGGCGCTGCCTTATTATGAAGGTTGCAGCACTGTTATTTTTCCTGTTTCAAAGTCCCTAGCTTCGGCTTTTGCTAACAGTGCCAGTAACCCTATTACTACAATAATTCAGCAAGCGTTGCAAAGTGGTTTTGTCTTGAAATTATTGCCTCAAATCAATGATAAGTGCAGCGGATGCACTAACTCAGGTGGCAATTGTGGCAGCAATGATGGACATTTCGTCTGTTACTGTAACGATGGAACTCATTCTAACTCTTGTTCATCATTAGGTGCAACAGCAGCAGGTGTTGGAATTGTTGTAGTCTTTGCTGTGATCATTTGCAACCGCAAGAGATACTTCAGTTTAACACAAAGGAGGTTAATCTTTGAAAAAACAGGGGAATCTGATGACCAGAATGTGGAGGATTTCATCACAACTTATGGCTTTCTGGCTCCAAAGAGATATAGTTTTTCAGAAGTGAAGAAAATCACAAACTCATTTTGTGATCAATTAGGCAAAGGGGGATATGGTGTTGTGTACAAAGGGAAGTTATCTGATGGTCGTCTTGTTGCAGTGAAAGTGATAAATGAATCAAAAGGGAGTGGAGAAGAATTCATAAACGAAGTTGCTAGTATTAGCAGAACCTCTCATGTGAATATTGTCTCGCTTTTAGGATTTTGCAATGAGAGAAACAAAAGAGCACTTATTTATGAGTTCATGTTTAATAGCTCATTGGATAAGTTCATTTATGGAAATGGATCTCCAACTCCTACTTGCAATTTGGATTGGAACACATTGTATCAAATTGCAATTGGCATAGCTCGCGGACTAGAATATTTGCATCGAGGATGCGGTACAAGAATTTTACATCTTGATATTAAACCTCAAAATATTCTCTTGGATGAAGATTTTTGTCCTAAAATTTCTGATTTTGGATTAGCCAAGATATGTCAAAAGAAAGAGAGTATTGTGTCCATATTGGGAACAAGAGGAACTATTGGATATATTGCACCTGAAGTATTTAGTCGCATGTATGGTGGTGTTTCGCACAAATCTGATGTATATAGTTATGGCATGTTAATTCTTGAAATGGTTGGAGGAAGAAAAAACTACGAGAGTGGACGGTCAAATTCCAGCGAGATGTACTTTCCAGACTGGATTTACAAAGATCTTGAGCAAGGTAACATACCATCTCATATGCACTCTCTTGTGACTGATGAAGAAAATGATCTGATAAAAAAAACCATTTTAGTGAGTTTATGGTGCATTCAAACAAATCCATCAGATAGACCATCAATAAATAAAATAGTAGAAATGTTAGAAGGACCACTACAGTCAATACCATTTCCTCCTAAGCCTTTCTTGTATTCTACTTCAAGTTTACCCTTACAAATTTCACATATATCTTCCAGCAACATGGATGATGAGTCTTCAATGACCACGGTAAAAGATGGCTCCCTAGAATCAAAGGAAGCAAAAGCGAGAAAGGCTGTGATAATTGGTGATGATTTTGATCCTTGA 2061 0.3852 MKPLCRLGRLSCIWMFILALIAMATHVPTSVGAADNVDYLACKNTLSCGTVNQLTYPFWGQIDNTNNRPNSCGEPNLQITCEDKNNNNGVPKFTVDSVKYRILDWDVGKQNLTVARDDYFSTSFDFCSGDFSNNTLGETILQYDDNSVVNITLLYNCSSETKPSSDQFTFVQSCNSGSVYYAEQDDNKALPYYEGCSTVIFPVSKSLASAFANSASNPITTIIQQALQSGFVLKLLPQINDKCSGCTNSGGNCGSNDGHFVCYCNDGTHSNSCSSLGATAAGVGIVVVFAVIICNRKRYFSLTQRRLIFEKTGESDDQNVEDFITTYGFLAPKRYSFSEVKKITNSFCDQLGKGGYGVVYKGKLSDGRLVAVKVINESKGSGEEFINEVASISRTSHVNIVSLLGFCNERNKRALIYEFMFNSSLDKFIYGNGSPTPTCNLDWNTLYQIAIGIARGLEYLHRGCGTRILHLDIKPQNILLDEDFCPKISDFGLAKICQKKESIVSILGTRGTIGYIAPEVFSRMYGGVSHKSDVYSYGMLILEMVGGRKNYESGRSNSSEMYFPDWIYKDLEQGNIPSHMHSLVTDEENDLIKKTILVSLWCIQTNPSDRPSINKIVEMLEGPLQSIPFPPKPFLYSTSSLPLQISHISSSNMDDESSMTTVKDGSLESKEAKARKAVIIGDDFDP 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04323 686 FunFam S-receptor-like serine/threonine-protein kinase 314 419 - -
Arst4g04323 686 PANTHER RUST RESISTANCE KINASE LR10-RELATED 317 646 IPR045874 GO:0004672
Arst4g04323 686 Pfam Wall-associated receptor kinase C-terminal 182 267 IPR032872 -
Arst4g04323 686 CDD STKc_IRAK 351 622 - -
Arst4g04323 686 ProSiteProfiles Protein kinase domain profile. 345 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04323 686 FunFam PR5-like receptor kinase 420 630 - -
Arst4g04323 686 SMART serkin_6 345 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04323 686 Gene3D Transferase(Phosphotransferase) domain 1 420 627 - -
Arst4g04323 686 SUPERFAMILY Protein kinase-like (PK-like) 323 620 IPR011009 -
Arst4g04323 686 ProSitePatterns Protein kinases ATP-binding region signature. 351 373 IPR017441 GO:0005524
Arst4g04323 686 Gene3D Phosphorylase Kinase; domain 1 319 419 - -
Arst4g04323 686 Pfam Wall-associated receptor kinase galacturonan-binding 42 115 IPR025287 GO:0030247
Arst4g04323 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Arst4g04323 686 Pfam Protein kinase domain 349 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04323 Arst-Chr4 121124687 121127508 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04323 13 652 Receptor kinase-like Gene Family AT5G38260 42.209 3.98e-158 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst4g04323 Pkinase 2.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04323 - - adu:107486803 1310.05