Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04321 ATGAAACCTCTTTGTCGTCTTGGCCGCCTCTCTTGCATATGGATGTTCATCTTGGCTCTTATTGCCATGGCAACCCACGTTCCAACATCTGTAGGTGCTGCTGATAACGTTGATTACTTGGCGTGCAAGAACACTTTAAGCTGTGGAACCGTCAACCAACTCACTTACCCTTTCTGGGGTCAAATTGACAACACTAATAACAGGCCAAACTCTTGCGGTGAGCCTAACTTGCAGATCACATGTGAAGATAAAAACAATAATAATGGGGTCCCAAAGTTCACAGTGGATTCTGTCAAATACAGGATTCTTGATTGGGACGTCGGTAAACAGAATCTGACAGTTGCTAGGGACGATTACTTTAGTACTAGCTTTGATTTCTGTTCAGGAGATTTCAGCAACAACACCTTGGGTGAAACCATACTTCAATATGATGATAACAGTGTTGTTAATATCACACTCTTGTACAATTGTTCTTCAGAAACAAAGCCTTCTTCGGATCAGTTTACGTTTGTTCAAAGTTGCAACAGCGGTAGTGTCTACTATGCTGAACAAGATGATAATAAGGCGCTGCCTTATTATGAAGGTTGCAGCACTGTTATTTTTCCTGTTTCAAAGTCCCTAGCTTCGGCTTTTGCTAACAGTGCCAGTAACCCTATTACTACAATAATTCAGCAAGCGTTGCAAAGTGGTTTTGTCTTGAAATTATTGCCTCAAATCAATGATAAGTGCAGCGGATGCACTAACTCAGGTGGCAATTGTGGCAGCAATGATGGACATTTCGTCTGTTACTGTAACGATGGAACTCATTCTAACTCTTGTTCATCATTAGGATCATCTTCAAAGTGGAACTGGCGGCTTAAGACAGCTATAGGTGCAACAGCAGCAGGTGTTGGAATTGTTGTAGTCTTTGCTGTGATCATTTGCAACCGCAAGAGATACTTCAGTTTAACACAAAGGAGGTTAATCTTTGAAAAAACAGGGGAATCTGATGACCAGAATGTGGAGGATTTCATCACAACTTATGGCTTTCTGGCTCCAAAGAGATATAGTTTTTCAGAAGTGAAGAAAATCACAAACTCATTTTGTGATCAATTAGGCAAAGGGGGATATGGTGTTGTGTACAAAGGGAAGTTATCTGATGGTCGTCTTGTTGCAGTGAAAGTGATAAATGAATCAAAAGGGAGTGGAGAAGAATTCATAAACGAAGTTGCTAGTATTAGCAGAACCTCTCATGTGAATATTGTCTCGCTTTTAGGATTTTGCAATGAGAGAAACAAAAGAGCACTTATTTATGAGTTCATGTTTAATAGCTCATTGGATAAGTTCATTTATGGAAATGGATCTCCAACTCCTACTTGCAATTTGGATTGGAACACATTGTATCAAATTGCAATTGGCATAGCTCGCGGACTAGAATATTTGCATCGAGGATGCGGTACAAGAATTTTACATCTTGATATTAAACCTCAAAATATTCTCTTGGATGAAGATTTTTGTCCTAAAATTTCTGATTTTGGATTAGCCAAGATATGTCAAAAGAAAGAGAGTATTGTGTCCATATTGGGAACAAGAGGAACTATTGGATATATTGCACCTGAAGTATTTAGTCGCATGTATGGTGGTGTTTCGCACAAATCTGATGTATATAGTTATGGCATGTTAATTCTTGAAATGGTTGGAGGAAGAAAAAACTACGAGAGTGGACGGTCAAATTCCAGCGAGATGTACTTTCCAGACTGGATTTACAAAGATCTTGAGCAAGCAACATGGATGATGAGTCCAATTCAATGA 1791 0.3925 MKPLCRLGRLSCIWMFILALIAMATHVPTSVGAADNVDYLACKNTLSCGTVNQLTYPFWGQIDNTNNRPNSCGEPNLQITCEDKNNNNGVPKFTVDSVKYRILDWDVGKQNLTVARDDYFSTSFDFCSGDFSNNTLGETILQYDDNSVVNITLLYNCSSETKPSSDQFTFVQSCNSGSVYYAEQDDNKALPYYEGCSTVIFPVSKSLASAFANSASNPITTIIQQALQSGFVLKLLPQINDKCSGCTNSGGNCGSNDGHFVCYCNDGTHSNSCSSLGSSSKWNWRLKTAIGATAAGVGIVVVFAVIICNRKRYFSLTQRRLIFEKTGESDDQNVEDFITTYGFLAPKRYSFSEVKKITNSFCDQLGKGGYGVVYKGKLSDGRLVAVKVINESKGSGEEFINEVASISRTSHVNIVSLLGFCNERNKRALIYEFMFNSSLDKFIYGNGSPTPTCNLDWNTLYQIAIGIARGLEYLHRGCGTRILHLDIKPQNILLDEDFCPKISDFGLAKICQKKESIVSILGTRGTIGYIAPEVFSRMYGGVSHKSDVYSYGMLILEMVGGRKNYESGRSNSSEMYFPDWIYKDLEQATWMMSPIQ 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04321 596 SUPERFAMILY Protein kinase-like (PK-like) 337 580 IPR011009 -
Arst4g04321 596 Pfam Wall-associated receptor kinase galacturonan-binding 42 115 IPR025287 GO:0030247
Arst4g04321 596 FunFam S-receptor-like serine/threonine-protein kinase 328 433 - -
Arst4g04321 596 Gene3D Phosphorylase Kinase; domain 1 333 433 - -
Arst4g04321 596 Pfam Protein kinase domain 363 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04321 596 Pfam Wall-associated receptor kinase C-terminal 182 267 IPR032872 -
Arst4g04321 596 ProSitePatterns Serine/Threonine protein kinases active-site signature. 482 494 IPR008271 GO:0004672|GO:0006468
Arst4g04321 596 ProSiteProfiles Protein kinase domain profile. 359 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04321 596 FunFam Os07g0541700 protein 434 526 - -
Arst4g04321 596 ProSitePatterns Protein kinases ATP-binding region signature. 365 387 IPR017441 GO:0005524
Arst4g04321 596 SMART serkin_6 359 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04321 596 Gene3D Transferase(Phosphotransferase) domain 1 434 595 - -
Arst4g04321 596 PANTHER RUST RESISTANCE KINASE LR10-RELATED 331 588 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04321 Arst-Chr4 121116175 121127508 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04321 13 590 Receptor kinase-like Gene Family AT5G38260 41.402 1.30e-135 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst4g04321 Pkinase 4.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04321 - - adu:107486803 1115.14