Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04317 ATGAAACCTCTTTGTCGTCTTGGCCGCCTCTCTTGCATATGGATGTTCATCTTGGCTCTTATTGCCATGGCAACCCACGTTCCAACATCTGTAGGTGCTGCTGATAACGTTGATTACTTGGCGTGCAAGAACACTTTAAGCTGTGGAACCGTCAACCAACTCACTTACCCTTTCTGGGGTCAAATTGACAACACTAATAACAGGCCAAACTCTTGCGGTGAGCCTAACTTGCAGATCACATGTGAAGATAAAAACAATAATAATGGGGTCCCAAAGTTCACAGTGGATTCTGTCAAATACAGGATTCTTGATTGGGACGTCGGTAAACAGAATCTGACAGTTGCTAGGGACGATTACTTTAGTACTAGCTTTGATTTCTGTTCAGGAGATTTCAGCAACAACACCTTGGGTGAAACCATACTTCAATATGATGATAACAGTGTTGTTAATATCACACTCTTGTACAATTGTTCTTCAGAAACAAAGCCTTCTTCGGATCAGTTTACGTTTGTTCAAAGTTGCAACAGCGGTAGTGTCTACTATGCTGAACAAGATGATAATAAGGCGCTGCCTTATTATGAAGGTTGCAGCACTGTTATTTTTCCTGTTTCAAAGTCCCTAGCTTCGGCTTTTGCTAACAGTGCCAGTAACCCTATTACTACAATAATTCAGCAAGCGTTGCAAAGTGGTTTTGTCTTGAAATTATTGCCTCAAATCAATGATAAGTGCAGCGGATGCACTAACTCAGGTGGCAATTGTGGCAGCAATGATGGACATTTCGTCTGTTACTGTAACGATGGAACTCATTCTAACTCTTGTTCATCATTAGGATCATCTTCAAAGTGGAACTGGCGGCTTAAGACAGCTATAGGTGCAACAGCAGCAGGTGTTGGAATTGTTGTAGTCTTTGCTGTGATCATTTGCAACCGCAAGAGATACTTCAGTTTAACACAAAGGAGGTTAATCTTTGAAAAAACAGGGGAATCTGATGACCAGAATGTGGAGGATTTCATCACAACTTATGGCTTTCTGGCTCCAAAGAGATATAGTTTTTCAGAAGTGAAGAAAATCACAAACTCATTTTGTGATCAATTAGGCAAAGGGGGATATGGTGTTGTGTACAAAGGGAAGTTATCTGATGGTCGTCTTGTTGCAGTGAAAGTGATAAATGAATCAAAAGGGAGTGGAGAAGAATTCATAAACGAAGTTGCTAGTATTAGCAGAACCTCTCATGTGAATATTGTCTCGCTTTTAGGATTTTGCAATGAGAGAAACAAAAGAGCACTTATTTATGAGTTCATGTTTAATAGCTCATTGGATAAGTTCATTTATGGAAATGGATCTCCAACTCCTACTTGCAATTTGGATTGGAACACATTGTATCAAATTGCAATTGGCATAGCTCGCGGACTAGAATATTTGCATCGAGGATGCGGTACAAGAATTTTACATCTTGATATTAAACCTCAAAATATTCTCTTGGATGAAGATTTTTGTCCTAAAATTTCTGATTTTGGATTAGCCAAGATATGTCAAAAGAAAGAGAGTATTGTGTCCATATTGGGAACAAGAGGAACTATTGGATATATTGCACCTGAAGTATTTAGTCGCATGTATGGTGGTGTTTCGCACAAATCTGATGTATATAGTTATGGCATGTTAATTCTTGAAATGGTTGGAGGAAGAAAAAACTACGAGAGTGGACGGTCAAATTCCAGCGAGATGTACTTTCCAGACTGGATTTACAAAGATCTTGAGCAAGGCTTCATGCGTGGTACGCAATAA 1785 0.3938 MKPLCRLGRLSCIWMFILALIAMATHVPTSVGAADNVDYLACKNTLSCGTVNQLTYPFWGQIDNTNNRPNSCGEPNLQITCEDKNNNNGVPKFTVDSVKYRILDWDVGKQNLTVARDDYFSTSFDFCSGDFSNNTLGETILQYDDNSVVNITLLYNCSSETKPSSDQFTFVQSCNSGSVYYAEQDDNKALPYYEGCSTVIFPVSKSLASAFANSASNPITTIIQQALQSGFVLKLLPQINDKCSGCTNSGGNCGSNDGHFVCYCNDGTHSNSCSSLGSSSKWNWRLKTAIGATAAGVGIVVVFAVIICNRKRYFSLTQRRLIFEKTGESDDQNVEDFITTYGFLAPKRYSFSEVKKITNSFCDQLGKGGYGVVYKGKLSDGRLVAVKVINESKGSGEEFINEVASISRTSHVNIVSLLGFCNERNKRALIYEFMFNSSLDKFIYGNGSPTPTCNLDWNTLYQIAIGIARGLEYLHRGCGTRILHLDIKPQNILLDEDFCPKISDFGLAKICQKKESIVSILGTRGTIGYIAPEVFSRMYGGVSHKSDVYSYGMLILEMVGGRKNYESGRSNSSEMYFPDWIYKDLEQGFMRGTQ 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04317 594 Gene3D Transferase(Phosphotransferase) domain 1 434 591 - -
Arst4g04317 594 Pfam Wall-associated receptor kinase galacturonan-binding 42 115 IPR025287 GO:0030247
Arst4g04317 594 FunFam S-receptor-like serine/threonine-protein kinase 328 433 - -
Arst4g04317 594 Pfam Protein kinase domain 363 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04317 594 Gene3D Phosphorylase Kinase; domain 1 333 433 - -
Arst4g04317 594 ProSiteProfiles Protein kinase domain profile. 359 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04317 594 SMART serkin_6 359 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04317 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 482 494 IPR008271 GO:0004672|GO:0006468
Arst4g04317 594 PANTHER RUST RESISTANCE KINASE LR10-RELATED 331 587 IPR045874 GO:0004672
Arst4g04317 594 FunFam Os07g0541700 protein 434 526 - -
Arst4g04317 594 Pfam Wall-associated receptor kinase C-terminal 182 267 IPR032872 -
Arst4g04317 594 ProSitePatterns Protein kinases ATP-binding region signature. 365 387 IPR017441 GO:0005524
Arst4g04317 594 SUPERFAMILY Protein kinase-like (PK-like) 337 577 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04317 Arst-Chr4 121115917 121127494 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04317 13 588 Receptor kinase-like Gene Family AT5G38260 41.513 8.99e-136 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst4g04317 Pkinase 4.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04317 - - adu:107486803 1117.45