Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04316 ATGACATACCTCAAATCAGAATCCAAAATTCTTATTGGCTTTTATACTCTTGTGCTCTTCTTCATGACCTCTGTCCTTTCTGATGAAGAAGGTGCATACATGTTGAAGCTTATGAATGCACTCAAACCCCCTGGCTGGTCCAACACCACCCACATGTGCCAGTGGACTGGCGTGAGTTGCAACAATCAAAGTAGAAGGATTGAAGAGATCTTTCTCAAAGAAATGTCACTGACGGGAACAGTTCCTGCAGGCCTCAACGACTCCCTCTCCCAACTCACATACCTCTATCTCTCCTACAATAACCTGAGTGGGCCTGTTCCCTCTCTCGCCAACCTCTCTTTCCTCCAAGTAGCGTACCTCGACAACAACAACTTCACCACCATCCCTCATGGTTGCTTCCATGGTCTTACTACTTTGCACTCCTTGCTCCTGAATAACAACACCAACCTCCCACCATGGAACTTTCCAACGGATTTGACTGCTCACTCCTCTCAACTCCATGTCCTCGACCTCTCTTCTACAAATCTCATGGGATCCGTACCCAACATATCCCATTCCTTCGCAACTCTGCGATATCTTTCTCTCTCTAACAACAACCTCTCCTCCATCCCTGAGGATTGCTTCCACAACCTAACCAGTTTGGATGTCCTCTCTTTGGCCAACAACACCAACCTCGCACCATGGACCTTCCCCCTCGATTTGATTCATTCCTCATTCAAACTCTCCTACCTCGACCTCGAGGTTACAAATCTCATGGGATCCCTACCAAACTTATCTCATTTCTTCCCCGACTTGAATACCATTTCTCTCTCCAACAACAACCTTACCTTCATCCCCCAAGGTTGCTTCCAGGCTCTACCCTATTTGGGGCTGCTGAAGTTGGGAAACAACACGAACCTCACACCATGGACCTTCCCCGACTTGATTCAGTCCACAAAAATAGAAGAGCTCAATCTTGTTGCTACAAATGTCATGGGCTCTCTACCAGAAATATTTGACTCCTTGACAAGTTTGGAGACTCTTCTTCTCTCCAACAACAGCCTCACTGGTGTCTTGCCTGAGTCTTTTGGAAGGTCCAAGATTACCACATTGCACCTCAACGACCAGAAGGGCAAAGGATTTTCAGGTGTGGTTCCAGATTCTCTGATAAATCTCAGTCGCAGGAACCTGCAAACTGTTACTTTGAACAACAACTTTTTTCAGGGTCCTATGCCTAACATTTTAGGAGATTCTGACACTACGAATCTTGGAGATAACACCACCAATGCCTTTTGTCGAGACGACTATGATCCTTGTGACCAGAGAGTTACCATTTTGCTTGAAATTGCATCTGCATTTGGATATCCTTATTTGTTGGCCCGTTCATGGCGAGGAAATAATCCATGTCATAATTGGAGTTTTGTTGCATGTACTGGGGGTCTGATCACAACCGTGAATTTGACAAGGCAGAACTTGACAGGAACTATCTCAGATGCATTTGGTAAATTAACTCATTTGGAAAACTTGTATCTAAGTGGTAACAATTTAAGCGGTTCAATACCTGAAAACTTGACATCTCTTCATCAACTCAACAATCTCGATGTCTCCAACAACAACTTATCAGGAAAAATTCCCAATTTCTCACGTGGAGTATACCTGAATACTGAAGGTAACCCTTCGTTTGAGAGAAGAAAACCTTTGGGCAAGAGAAGAAAGCCACCTGCTTGGATCAAAGGCGCAATAGTAGCAGCAGCAGGTATTGGAGGTCTTGTTTTCTTGGTTGTAGTTATTTGTAACCGAAAGAGGTGTCTTAGCTTGTTACAAAGGATTTTGTGGAAGAAAACAGGACCATTTATTGATAATGAATTTGAAGAATTTATGAAAACTTATGGATCTTTGATGTTAAGGAGATATAATTATTCTGAAGTGAAAAGCATGACAAACTCATTTCGTGATAAATTAGGAAGGGGAGGATATGGCATTGTATACAAAGCATGCTTAAGTGATGGTTGTCCGGTAGCAGTGAAGGTGTTGACCGAATCTAGCGGAAGTGGGGAGGAATTCCTAAATGAGGTAGCTAGTATTGGTAGAACTTCTCATATGAACATTGTCTCGCTGTTGGGATTTTGCTATGAAAAATATAAAAGGGCACTCATCTATGAATTCATGCCAAATGGTTCTTTGGATAAGTTTATCTACAAACAAGAATCTCCCAATGCTATTTGTAATTTGGATTGGAATACATTGTTTCAAATTACAATTGGTATTGCGCGAGGATTAGAATATTTGCACCGAGGATGTGCGGCAAGAATTTTGCATCTTGATATTAAACCTCAAAATATTCTGTTAGATGAAGATTTTTGTCCAAAAATTGCTGATTTTGGATTGGCAAAAATATGCAAAAAGAAAGAGAGTATTGTATCTTTACAAGGTACAAGAGGAACTCCTGGATACATTGCACCAGAAGTATTTAGCCGAACTTTTGGTAAAGTTTCTCACAAATCTGATGTGTATAGTTATGGAATGTTGATTCTTGAATTGGTGGGAGGTAGAAAGAACTACGACACTGGCGGATCACTTACCAGTGAAATGTACTTTCCAGATTGGATTTATAAGGATCTTGAGGAGCAAAATATCCTTGGACGGGGTTTGTCCACTACAGAAGAAGAAAGTGATATGATAAAGAAAATTACTTTGGTGAGTTTATGGTGCATTCAAACAAATCCATTGGATAGACCAGCAATAAACAAAGTAGTAGAAATGTTAGAAGGACCACTTCAGTCAGTGCCATATCCTCCAAAACCTGTCTTATATTCTCCTCAAATGTCTATCTCACAATTTTCACAAATCTCCTATAACAGTACAGATGAGGAGGATTCTGAGATTGTTGAGGAGACTATTTCCATCAATAAAATGAGTTCAAAATTTGCAAAGTAA 2916 0.4112 MTYLKSESKILIGFYTLVLFFMTSVLSDEEGAYMLKLMNALKPPGWSNTTHMCQWTGVSCNNQSRRIEEIFLKEMSLTGTVPAGLNDSLSQLTYLYLSYNNLSGPVPSLANLSFLQVAYLDNNNFTTIPHGCFHGLTTLHSLLLNNNTNLPPWNFPTDLTAHSSQLHVLDLSSTNLMGSVPNISHSFATLRYLSLSNNNLSSIPEDCFHNLTSLDVLSLANNTNLAPWTFPLDLIHSSFKLSYLDLEVTNLMGSLPNLSHFFPDLNTISLSNNNLTFIPQGCFQALPYLGLLKLGNNTNLTPWTFPDLIQSTKIEELNLVATNVMGSLPEIFDSLTSLETLLLSNNSLTGVLPESFGRSKITTLHLNDQKGKGFSGVVPDSLINLSRRNLQTVTLNNNFFQGPMPNILGDSDTTNLGDNTTNAFCRDDYDPCDQRVTILLEIASAFGYPYLLARSWRGNNPCHNWSFVACTGGLITTVNLTRQNLTGTISDAFGKLTHLENLYLSGNNLSGSIPENLTSLHQLNNLDVSNNNLSGKIPNFSRGVYLNTEGNPSFERRKPLGKRRKPPAWIKGAIVAAAGIGGLVFLVVVICNRKRCLSLLQRILWKKTGPFIDNEFEEFMKTYGSLMLRRYNYSEVKSMTNSFRDKLGRGGYGIVYKACLSDGCPVAVKVLTESSGSGEEFLNEVASIGRTSHMNIVSLLGFCYEKYKRALIYEFMPNGSLDKFIYKQESPNAICNLDWNTLFQITIGIARGLEYLHRGCAARILHLDIKPQNILLDEDFCPKIADFGLAKICKKKESIVSLQGTRGTPGYIAPEVFSRTFGKVSHKSDVYSYGMLILELVGGRKNYDTGGSLTSEMYFPDWIYKDLEEQNILGRGLSTTEEESDMIKKITLVSLWCIQTNPLDRPAINKVVEMLEGPLQSVPYPPKPVLYSPQMSISQFSQISYNSTDEEDSEIVEETISINKMSSKFAK 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04316 971 FunFam S-receptor-like serine/threonine-protein kinase 612 715 - -
Arst4g04316 971 SMART serkin_6 641 915 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04316 971 Gene3D Transferase(Phosphotransferase) domain 1 716 922 - -
Arst4g04316 971 ProSiteProfiles Leucine-rich repeat profile. 189 210 IPR001611 GO:0005515
Arst4g04316 971 Pfam Leucine rich repeat N-terminal domain 28 61 IPR013210 -
Arst4g04316 971 Pfam Leucine rich repeat N-terminal domain 436 470 IPR013210 -
Arst4g04316 971 Pfam Leucine Rich Repeat 337 357 IPR001611 GO:0005515
Arst4g04316 971 FunFam PR5-like receptor kinase 716 925 - -
Arst4g04316 971 SUPERFAMILY L domain-like 50 405 - -
Arst4g04316 971 ProSitePatterns Serine/Threonine protein kinases active-site signature. 764 776 IPR008271 GO:0004672|GO:0006468
Arst4g04316 971 Gene3D Phosphorylase Kinase; domain 1 614 715 - -
Arst4g04316 971 Pfam Protein kinase domain 645 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04316 971 PANTHER OSJNBA0070M12.3 PROTEIN 241 375 - -
Arst4g04316 971 FunFam Leucine-rich repeat receptor-like kinase 434 557 - -
Arst4g04316 971 SMART LRR_bac_2 520 540 - -
Arst4g04316 971 SMART LRR_bac_2 187 206 - -
Arst4g04316 971 SMART LRR_bac_2 335 355 - -
Arst4g04316 971 SMART LRR_bac_2 89 109 - -
Arst4g04316 971 SMART LRR_bac_2 496 516 - -
Arst4g04316 971 SUPERFAMILY L domain-like 435 540 - -
Arst4g04316 971 SMART LRR_sd22_2 520 542 - -
Arst4g04316 971 SMART LRR_sd22_2 89 114 - -
Arst4g04316 971 SMART LRR_sd22_2 496 519 - -
Arst4g04316 971 Gene3D Ribonuclease Inhibitor 433 558 IPR032675 -
Arst4g04316 971 ProSiteProfiles Protein kinase domain profile. 641 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04316 971 ProSitePatterns Protein kinases ATP-binding region signature. 647 669 IPR017441 GO:0005524
Arst4g04316 971 ProSiteProfiles Leucine-rich repeat profile. 91 113 IPR001611 GO:0005515
Arst4g04316 971 ProSiteProfiles Leucine-rich repeat profile. 498 521 IPR001611 GO:0005515
Arst4g04316 971 Gene3D Ribonuclease Inhibitor 27 227 IPR032675 -
Arst4g04316 971 Gene3D Ribonuclease Inhibitor 229 422 IPR032675 -
Arst4g04316 971 Pfam Leucine rich repeat 165 222 IPR001611 GO:0005515
Arst4g04316 971 Pfam Leucine rich repeat 476 533 IPR001611 GO:0005515
Arst4g04316 971 SMART LRR_typ_2 262 285 IPR003591 -
Arst4g04316 971 SMART LRR_typ_2 211 232 IPR003591 -
Arst4g04316 971 SMART LRR_typ_2 112 135 IPR003591 -
Arst4g04316 971 SMART LRR_typ_2 335 358 IPR003591 -
Arst4g04316 971 SMART LRR_typ_2 187 210 IPR003591 -
Arst4g04316 971 SMART LRR_typ_2 496 520 IPR003591 -
Arst4g04316 971 SMART LRR_typ_2 89 111 IPR003591 -
Arst4g04316 971 CDD STKc_IRAK 647 917 - -
Arst4g04316 971 SUPERFAMILY Protein kinase-like (PK-like) 620 915 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04316 Arst-Chr4 121112219 121115549 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04316 627 937 Receptor kinase-like Gene Family AT5G38280 59.683 2.13e-125 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst4g04316 Pkinase 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04316 - K00924 aip:107635702 1745.33