Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04315 ATGACATACCTCAAATCAGAATCCAAAATTCTTATTGGCTTTTATACTCTTGTGCTCTTCTTCATGACCTCTGTCCTTTCTGATGAAGAAGGTGCATACATGTTGAAGCTTATGAATGCACTCAAACCCCCTGGCTGGTCCAACTCCACCCACATGTGCCAGTGGACTGGCGTGACTTGCAACGATCAAAGTGGAAGGATTGAAGACATCGATCTCAGTTCAATGTCGCTGACGGGAACAGTTCCTGCAGGTCTCAACGACTCCCTCTCCCAACTCACATTCCTCGATCTCTCCTACAATAACCTGAGTGGGCCTGTTCCCTCTCTCGCCAACCTCATCGACCTCGGATCAGTGTACCTCGACAACAACAACTTCACCACCATCCCTCATGGTTGCTTCCATGGTCTTACTACTTTGCACTCCTTGCTCTTGAATAACAACACCAACCTCCCACCATGGAACTTTCCAACCGATTTGACTGCTCACTCCTCCCAACTCCGTTCCCTCGACCTCTCTTCTACAAATCTCATGGGATCCGTACCCAACATATCCCATTCCTTCCCAACTATGCGATATCTTTATCTCTCTAACAACAACCTCTCCTCCATCCCTGAGGGTTGCTTCCACAACCTAACCAGTTTGGATGGCCTCTCTTTGGCCAACAACACCAACCTCCCACCATGGACCTTCCCCGACTTGATTCAGTCCACAAAAATAGAAGAGCTCAATCTTGTTGCTACAAATGTCATGGGCTCTCTACCAGAAATATTTGACTCCTTGACAAGTTTGGAGACTCTTCTTCTCTCCAACAACAGCCTCACTGGTGTCTTGCCTGAGTCTTTTGGAAGGTCCAAGATTACCACATTGCACCTCAACGACCAGAAGGGCAAAGGATTTTCAGGTACAATGGATGTTGTTTCAAATATGATCGATTTGTCTGAGGCGTGGCTTCAGGGGAACTCCTTTGATGGATATATCCCTGACATGTCTCGTTGTACCGCCTTACAAGATTTACGACTTGCGCACAATCGATTTACAGGTGTGGTTCCAGATTCTCTGATAAATCTCAGTCGCAGGAACCTGCAAACTGTTACTTTGAACAACAACTTTTTTCAGGGTCCTATGCCTAACATTTTAGGAGATTCTGACACTACGAATCTTGGAGATAACACCACCAATGCCTTTTGTCGAGACGACTATGATCCTTGTGACCAGAGAGTTACCATTTTGCTTGAAATTGCATCTGCATTTGGATATCCTTATTTGTTGGCCCGTTCATGGCGAGGAAATAATCCATGTCATAATTGGAGTTTTGTTGCATGTACTGGGGGTCTGATCACAACCGTGAATTTGACAAGGCAGAACTTGACAGGAACTATCTCAGATGCATTTGGTAAATTAACTCATTTGGAAAACTTGTATCTAAGTGGTAACAATTTAAGCGGTTCAATACCTGAAAACTTGACATCTCTTCATCAACTCAACAATCTCGATGTCTCCAACAACAACTTATCAGGAAAAATTCCCAATTTCTCACGTGGAGTATACCTGAATACTGAAGGTAACCCTTCGTTTGAGAGAAGAAAACCTTTGGGCAAGAGAAGAAAGCCACCTGCTTGGATCAAAGGCGCAATAGTAGCAGCAGCAGGTATTGGAGGTCTTGTTTTCTTGGTTGTAGTTATTTGTAACCGAAAGAGGTGTCTTAGCTTGTTACAAAGGATTTTGTGGAAGAAAACAGGACCATTTATTGATAATGAATTTGAAGAATTTATGAAAACTTATGGATCTTTGATGTTAAGGAGATATAATTATTCTGAAGTGAAAAGCATGACAAACTCATTTCGTGATAAATTAGGAAGGGGAGGATATGGCATTGTATACAAAGCATGCTTAAGTGATGGTTGTCCGGTAGCAGTGAAGGTGTTGACCGAATCTAGCGGAAGTGGGGAGGAATTCCTAAATGAGGTAGCTAGTATTGGTAGAACTTCTCATATGAACATTGTCTCGCTGTTGGGATTTTGCTATGAAAAATATAAAAGGGCACTCATCTATGAATTCATGCCAAATGGTTCTTTGGATAAGTTTATCTACAAACAAGAATCTCCCAATGCTATTTGTAATTTGGATTGGAATACATTGTTTCAAATTACAATTGGTATTGCGCGAGGATTAGAATATTTGCACCGAGGATGTGCGGCAAGAATTTTGCATCTTGATATTAAACCTCAAAATATTCTGTTAGATGAAGATTTTTGTCCAAAAATTGCTGATTTTGGATTGGCAAAAATATGCAAAAAGAAAGAGAGTATTGTATCTTTACAAGGTACAAGAGGAACTCCTGGATACATTGCACCAGAAGTATTTAGCCGAACTTTTGGTAAAGTTTCTCACAAATCTGATGTGTATAGTTATGGAATGTTGATTCTTGAATTGGTGGGAGGTAGAAAGAACTACGACACTGGCGGATCACTTACCAGTGAAATGTACTTTCCAGATTGGATTTATAAGGATCTTGAGGAGCAAAATATCCTTGGACGGGGTTTGTCCACTACAGAAGAAGAAAGTGATATGATAAAGAAAATTACTTTGGTGAGTTTATGGTGCATTCAAACAAATCCATTGGATAGACCAGCAATAAACAAAGTAGTAGAAATGTTAGAAGGACCACTTCAGTCAGTGCCATATCCTCCAAAACCTGTCTTATATTCTCCTCAAATGTCTATCTCACAATTTTCACAAATCTCCTATAACAGTACAGATGAGGAGGATTCTGAGATTGTTGAGGAGACTATTTCCATCAATAAAATGAGTTCAAAATTTGCAAAGTAA 2829 0.4097 MTYLKSESKILIGFYTLVLFFMTSVLSDEEGAYMLKLMNALKPPGWSNSTHMCQWTGVTCNDQSGRIEDIDLSSMSLTGTVPAGLNDSLSQLTFLDLSYNNLSGPVPSLANLIDLGSVYLDNNNFTTIPHGCFHGLTTLHSLLLNNNTNLPPWNFPTDLTAHSSQLRSLDLSSTNLMGSVPNISHSFPTMRYLYLSNNNLSSIPEGCFHNLTSLDGLSLANNTNLPPWTFPDLIQSTKIEELNLVATNVMGSLPEIFDSLTSLETLLLSNNSLTGVLPESFGRSKITTLHLNDQKGKGFSGTMDVVSNMIDLSEAWLQGNSFDGYIPDMSRCTALQDLRLAHNRFTGVVPDSLINLSRRNLQTVTLNNNFFQGPMPNILGDSDTTNLGDNTTNAFCRDDYDPCDQRVTILLEIASAFGYPYLLARSWRGNNPCHNWSFVACTGGLITTVNLTRQNLTGTISDAFGKLTHLENLYLSGNNLSGSIPENLTSLHQLNNLDVSNNNLSGKIPNFSRGVYLNTEGNPSFERRKPLGKRRKPPAWIKGAIVAAAGIGGLVFLVVVICNRKRCLSLLQRILWKKTGPFIDNEFEEFMKTYGSLMLRRYNYSEVKSMTNSFRDKLGRGGYGIVYKACLSDGCPVAVKVLTESSGSGEEFLNEVASIGRTSHMNIVSLLGFCYEKYKRALIYEFMPNGSLDKFIYKQESPNAICNLDWNTLFQITIGIARGLEYLHRGCAARILHLDIKPQNILLDEDFCPKIADFGLAKICKKKESIVSLQGTRGTPGYIAPEVFSRTFGKVSHKSDVYSYGMLILELVGGRKNYDTGGSLTSEMYFPDWIYKDLEEQNILGRGLSTTEEESDMIKKITLVSLWCIQTNPLDRPAINKVVEMLEGPLQSVPYPPKPVLYSPQMSISQFSQISYNSTDEEDSEIVEETISINKMSSKFAK 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04315 942 PRINTS Leucine-rich repeat signature 260 273 - -
Arst4g04315 942 PRINTS Leucine-rich repeat signature 92 105 - -
Arst4g04315 942 CDD STKc_IRAK 618 888 - -
Arst4g04315 942 Gene3D Ribonuclease Inhibitor 158 401 IPR032675 -
Arst4g04315 942 Pfam Leucine rich repeat 164 222 IPR001611 GO:0005515
Arst4g04315 942 Pfam Leucine rich repeat 447 504 IPR001611 GO:0005515
Arst4g04315 942 ProSiteProfiles Protein kinase domain profile. 612 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04315 942 ProSiteProfiles Leucine-rich repeat profile. 189 210 IPR001611 GO:0005515
Arst4g04315 942 FunFam PR5-like receptor kinase 687 896 - -
Arst4g04315 942 Gene3D Phosphorylase Kinase; domain 1 585 686 - -
Arst4g04315 942 Gene3D Ribonuclease Inhibitor 27 157 IPR032675 -
Arst4g04315 942 Pfam Leucine Rich Repeat 262 282 IPR001611 GO:0005515
Arst4g04315 942 ProSitePatterns Serine/Threonine protein kinases active-site signature. 735 747 IPR008271 GO:0004672|GO:0006468
Arst4g04315 942 SMART serkin_6 612 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04315 942 FunFam S-receptor-like serine/threonine-protein kinase 583 686 - -
Arst4g04315 942 SUPERFAMILY L domain-like 49 373 - -
Arst4g04315 942 SUPERFAMILY L domain-like 406 511 - -
Arst4g04315 942 ProSitePatterns Protein kinases ATP-binding region signature. 618 640 IPR017441 GO:0005524
Arst4g04315 942 Gene3D Ribonuclease Inhibitor 404 529 IPR032675 -
Arst4g04315 942 Pfam Protein kinase domain 616 884 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04315 942 Gene3D Transferase(Phosphotransferase) domain 1 687 893 - -
Arst4g04315 942 SMART LRR_typ_2 89 111 IPR003591 -
Arst4g04315 942 SMART LRR_typ_2 260 283 IPR003591 -
Arst4g04315 942 SMART LRR_typ_2 467 491 IPR003591 -
Arst4g04315 942 SMART LRR_typ_2 112 135 IPR003591 -
Arst4g04315 942 SMART LRR_typ_2 332 355 IPR003591 -
Arst4g04315 942 SMART LRR_typ_2 187 210 IPR003591 -
Arst4g04315 942 SMART LRR_typ_2 211 232 IPR003591 -
Arst4g04315 942 PANTHER OSJNBA0070M12.3 PROTEIN 190 889 - -
Arst4g04315 942 ProSiteProfiles Leucine-rich repeat profile. 469 492 IPR001611 GO:0005515
Arst4g04315 942 SUPERFAMILY Protein kinase-like (PK-like) 591 886 IPR011009 -
Arst4g04315 942 Pfam Leucine rich repeat N-terminal domain 407 441 IPR013210 -
Arst4g04315 942 Pfam Leucine rich repeat N-terminal domain 28 61 IPR013210 -
Arst4g04315 942 FunFam Leucine-rich repeat receptor-like kinase 405 528 - -
Arst4g04315 942 ProSiteProfiles Leucine-rich repeat profile. 91 113 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04315 Arst-Chr4 121112219 121124117 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04315 598 908 Receptor kinase-like Gene Family AT5G38280 59.683 1.14e-125 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst4g04315 Pkinase 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04315 - K00924 aip:107635702 1469.52