Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04314 ATGGCATACTTGAAATCAAGATGGAAAAATGGGATTATTAGTAATTTGTGTATGGTTGTGGTGTGCATCATGGGTTGTGTGGAGTCCAACGATGATGAAGCTGCATACATGTTGAAGCTTCTCAATGCACTCAAACCCCCTGGCTGGTCCAACACCACTCACATGTGCCAGTGGATTGGCGTGAATTGCAACGATCAAAGTGGAAGGATTGAAGAGATCCATCTCAGTTCAATGTCGCTGACGGGAACAGTTCCTGAAGGCCTCAACGACTCCCTCTCCCAACTCGTAAACCTCTATCTCTTCAACAATAATCTGAGTGGGCCTGTTCCCTCTCTCGCCAACCTCTCCTTCCTCCAACAAGTGTACCTCGACAACAACAACTTCACCACCATCCCTCATGGTTGCTTCCATGGTCTTACTACTTTGCAGATTTTGAGCTTGAGTAGCAATACCAACCTCGCACCATGGAACTTTCCTATCGATTTGACTCCTCACTCCTCCCAACTCTATCAACTCGACCTGTCCTCTACAAATCTCAAAGGCTCCATACCACCAAATATATCCCATTCCTTCCCAACTCTGCTATCTCTTGATCTCTCTAACAACAACCTCTCCTCCATCCCTGAGGGTTGCTTCCACAACCTAACCAGTTTGGGTGGCCTCTCTTTGGCCAACAACACCAACCTCCCACCATGGACCTTCCCCGACTTGATTCAGTCCACAAAAATAGAAGAGCTCAATCTTGTTGCTACAAATGTCATGGGCTCTCTACCAGAAATATTTGACTCCTTGACAAGTTTGGAGACTCTTCTTCTCTCCAACAACAGCCTCACTGGTGTCTTGCCTGAGTCTTTTGGAAGGTCCAAGATTACCACATTGCACCTCAACGACCAGAAGGGCAAAGGATTTTCAGGTACAATGGATGTTGTTTCAAATATGATCGATTTGTCTGAGGCGTGGCTTCAGGGGAACTCCTTTGATGGATATATCCCTGACATGTCTCGTTGTACCGCCTTACAAGATTTACGACTTGCGCACAATCGATTTACAGGTGTGGTTCCAGATTCTCTGATAAATCTCAGTCGCAGGAACCTGCAAACTGTTACTTTGAACAACAACTTTTTTCAGGGTCCTATGCCTAACATTTTAGGAGATTCTGACACTACGAATCTTGGAGATAACACCACCAATGCCTTTTGTCGAGACGACTATGATCCTTGTGACCAGAGAGTTACCATTTTGCTTGAAATTGCATCTGCATTTGGATATCCTTATTTGTTGGCCCGTTCATGGCGAGGAAATAATCCATGTCATAATTGGAGTTTTGTTGCATGTACTGGGGGTCTGATCACAACCGTGAATTTGACAAGGCAGAACTTGACAGGAACTATCTCAGATGCATTTGGTAAATTAACTCATTTGGAAAACTTGTATCTAAGTGGTAACAATTTAAGCGGTTCAATACCTGAAAACTTGACATCTCTTCATCAACTCAACAATCTCGATGTCTCCAACAACAACTTATCAGGAAAAATTCCCAATTTCTCACGTGGAGTATACCTGAATACTGAAGGTAACCCTTCGTTTGAGAGAAGAAAACCTTTGGGCAAGAGAAGAAAGCCACCTGCTTGGATCAAAGGCGCAATAGTAGCAGCAGCAGGTATTGGAGGTCTTGTTTTCTTGGTTGTAGTTATTTGTAACCGAAAGAGGTGTCTTAGCTTGTTACAAAGGATTTTGTGGAAGAAAACAGGACCATTTATTGATAATGAATTTGAAGAATTTATGAAAACTTATGGATCTTTGATGTTAAGGAGATATAATTATTCTGAAGTGAAAAGCATGACAAACTCATTTCGTGATAAATTAGGAAGGGGAGGATATGGCATTGTATACAAAGCATGCTTAAGTGATGGTTGTCCGGTAGCAGTGAAGGTGTTGACCGAATCTAGCGGAAGTGGGGAGGAATTCCTAAATGAGGTAGCTAGTATTGGTAGAACTTCTCATATGAACATTGTCTCGCTGTTGGGATTTTGCTATGAAAAATATAAAAGGGCACTCATCTATGAATTCATGCCAAATGGTTCTTTGGATAAGTTTATCTACAAACAAGAATCTCCCAATGCTATTTGTAATTTGGATTGGAATACATTGTTTCAAATTACAATTGGTATTGCGCGAGGATTAGAATATTTGCACCGAGGATGTGCGGCAAGAATTTTGCATCTTGATATTAAACCTCAAAATATTCTGTTAGATGAAGATTTTTGTCCAAAAATTGCTGATTTTGGATTGGCAAAAATATGCAAAAAGAAAGAGAGTATTGTATCTTTACAAGGTACAAGAGGAACTCCTGGATACATTGCACCAGAAGTATTTAGCCGAACTTTTGGTAAAGTTTCTCACAAATCTGATGTGTATAGTTATGGAATGTTGATTCTTGAATTGGTGGGAGGTAGAAAGAACTACGACACTGGCGGATCACTTACCAGTGAAATGTACTTTCCAGATTGGATTTATAAGGATCTTGAGGAGCAAAATATCCTTGGACGGGGTTTGTCCACTACAGAAGAAGAAAGTGATATGATAAAGAAAATTACTTTGGTGAGTTTATGGTGCATTCAAACAAATCCATTGGATAGACCAGCAATAAACAAAGTAGTAGAAATGTTAGAAGGACCACTTCAGTCAGTGCCATATCCTCCAAAACCTGTCTTATATTCTCCTCAAATGTCTATCTCACAATTTTCACAAATCTCCTATAACAGTACAGATGAGGAGGATTCTGAGATTGTTGAGGAGACTATTTCCATCAATAAAATGAGTTCAAAATTTGCAAAGTAA 2841 0.4073 MAYLKSRWKNGIISNLCMVVVCIMGCVESNDDEAAYMLKLLNALKPPGWSNTTHMCQWIGVNCNDQSGRIEEIHLSSMSLTGTVPEGLNDSLSQLVNLYLFNNNLSGPVPSLANLSFLQQVYLDNNNFTTIPHGCFHGLTTLQILSLSSNTNLAPWNFPIDLTPHSSQLYQLDLSSTNLKGSIPPNISHSFPTLLSLDLSNNNLSSIPEGCFHNLTSLGGLSLANNTNLPPWTFPDLIQSTKIEELNLVATNVMGSLPEIFDSLTSLETLLLSNNSLTGVLPESFGRSKITTLHLNDQKGKGFSGTMDVVSNMIDLSEAWLQGNSFDGYIPDMSRCTALQDLRLAHNRFTGVVPDSLINLSRRNLQTVTLNNNFFQGPMPNILGDSDTTNLGDNTTNAFCRDDYDPCDQRVTILLEIASAFGYPYLLARSWRGNNPCHNWSFVACTGGLITTVNLTRQNLTGTISDAFGKLTHLENLYLSGNNLSGSIPENLTSLHQLNNLDVSNNNLSGKIPNFSRGVYLNTEGNPSFERRKPLGKRRKPPAWIKGAIVAAAGIGGLVFLVVVICNRKRCLSLLQRILWKKTGPFIDNEFEEFMKTYGSLMLRRYNYSEVKSMTNSFRDKLGRGGYGIVYKACLSDGCPVAVKVLTESSGSGEEFLNEVASIGRTSHMNIVSLLGFCYEKYKRALIYEFMPNGSLDKFIYKQESPNAICNLDWNTLFQITIGIARGLEYLHRGCAARILHLDIKPQNILLDEDFCPKIADFGLAKICKKKESIVSLQGTRGTPGYIAPEVFSRTFGKVSHKSDVYSYGMLILELVGGRKNYDTGGSLTSEMYFPDWIYKDLEEQNILGRGLSTTEEESDMIKKITLVSLWCIQTNPLDRPAINKVVEMLEGPLQSVPYPPKPVLYSPQMSISQFSQISYNSTDEEDSEIVEETISINKMSSKFAK 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04314 946 Pfam Leucine Rich Repeat 266 286 IPR001611 GO:0005515
Arst4g04314 946 Pfam Leucine rich repeat 451 508 IPR001611 GO:0005515
Arst4g04314 946 Pfam Leucine rich repeat 168 226 IPR001611 GO:0005515
Arst4g04314 946 Pfam Leucine rich repeat 118 151 IPR001611 GO:0005515
Arst4g04314 946 FunFam S-receptor-like serine/threonine-protein kinase 587 690 - -
Arst4g04314 946 Pfam Leucine rich repeat N-terminal domain 411 445 IPR013210 -
Arst4g04314 946 Pfam Leucine rich repeat N-terminal domain 31 64 IPR013210 -
Arst4g04314 946 SUPERFAMILY L domain-like 410 515 - -
Arst4g04314 946 ProSitePatterns Serine/Threonine protein kinases active-site signature. 739 751 IPR008271 GO:0004672|GO:0006468
Arst4g04314 946 Pfam Protein kinase domain 620 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04314 946 Gene3D Ribonuclease Inhibitor 408 533 IPR032675 -
Arst4g04314 946 FunFam Leucine-rich repeat receptor-like kinase 409 532 - -
Arst4g04314 946 SMART LRR_typ_2 336 359 IPR003591 -
Arst4g04314 946 SMART LRR_typ_2 215 236 IPR003591 -
Arst4g04314 946 SMART LRR_typ_2 115 138 IPR003591 -
Arst4g04314 946 SMART LRR_typ_2 264 287 IPR003591 -
Arst4g04314 946 SMART LRR_typ_2 471 495 IPR003591 -
Arst4g04314 946 SMART LRR_typ_2 191 214 IPR003591 -
Arst4g04314 946 ProSiteProfiles Leucine-rich repeat profile. 193 214 IPR001611 GO:0005515
Arst4g04314 946 ProSiteProfiles Protein kinase domain profile. 616 905 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04314 946 PANTHER OSJNBA0070M12.3 PROTEIN 201 893 - -
Arst4g04314 946 Gene3D Transferase(Phosphotransferase) domain 1 691 897 - -
Arst4g04314 946 PRINTS Leucine-rich repeat signature 194 207 - -
Arst4g04314 946 PRINTS Leucine-rich repeat signature 264 277 - -
Arst4g04314 946 SMART serkin_6 616 890 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04314 946 Gene3D Ribonuclease Inhibitor 30 160 IPR032675 -
Arst4g04314 946 CDD STKc_IRAK 622 892 - -
Arst4g04314 946 SUPERFAMILY Protein kinase-like (PK-like) 595 890 IPR011009 -
Arst4g04314 946 ProSitePatterns Protein kinases ATP-binding region signature. 622 644 IPR017441 GO:0005524
Arst4g04314 946 Gene3D Phosphorylase Kinase; domain 1 589 690 - -
Arst4g04314 946 Gene3D Ribonuclease Inhibitor 164 405 IPR032675 -
Arst4g04314 946 FunFam PR5-like receptor kinase 691 900 - -
Arst4g04314 946 ProSiteProfiles Leucine-rich repeat profile. 473 496 IPR001611 GO:0005515
Arst4g04314 946 SUPERFAMILY L domain-like 52 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04314 Arst-Chr4 121112219 121194426 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04314 602 912 Receptor kinase-like Gene Family AT5G38280 59.683 2.34e-125 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst4g04314 Pkinase 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04314 - K00924 aip:107635702 1526.53