Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04313 ATGACATACCTCAAATCAGAATCCAAAATTCTTATTGGCTTTTATACTCTTGTGCTCTTCTTCATGACCTCTGTCCTTTCTGATGAAGAAGGTGCATACATGTTGAAGCTTATGAATGCACTCAAACCCCCTGGCTGGTCCAACACCACCCACATGTGCCAGTGGACTGGCGTGAGTTGCAACAATCAAAGTAGAAGGATTGAAGAGATCTTTCTCAAAGAAATGTCACTGACGGGAACAGTTCCTGCAGGCCTCAACGACTCCCTCTCCCAACTCACATACCTCTATCTCTCCTACAATAACCTGAGTGGGCCTGTTCCCTCTCTCGCCAACCTCTCTTTCCTCCAAGTAGCGTACCTCGACAACAACAACTTCACCACCATCCCTCATGGTTGCTTCCATGGTCTTACTACTTTGCACTCCTTGCTCCTGAATAACAACACCAACCTCCCACCATGGAACTTTCCAACGGATTTGACTGCTCACTCCTCTCAACTCCATGTCCTCGACCTCTCTTCTACAAATCTCATGGGATCCGTACCCAACATATCCCATTCCTTCGCAACTCTGCGATATCTTTCTCTCTCTAACAACAACCTCTCCTCCATCCCTGAGGATTGCTTCCACAACCTAACCAGTTTGGATGTCCTCTCTTTGGCCAACAACACCAACCTCGCACCATGGACCTTCCCCCTCGATTTGATTCATTCCTCATTCAAACTCTCCTACCTCGACCTCGAGGTTACAAATCTCATGGGATCCCTACCAAACTTATCTCATTTCTTCCCCGACTTGAATACCATTTCTCTCTCCAACAACAACCTTACCTTCATCCCCCAAGGTTGCTTCCAGGCTCTACCCTATTTGGGGCTGCTGAAGTTGGGAAACAACACGAACCTCACACCATGGACCTTCCCCGACTTGATTCAGTCCACAAAAATAGAAGAGCTCAATCTTGTTGCTACAAATGTCATGGGCTCTCTACCAGAAATATTTGACTCCTTGACAAGTTTGGAGACTCTTCTTCTCTCCAACAACAGCCTCACTGGTGTCTTGCCTGAGTCTTTTGGAAGGTCCAAGATTACCACATTGCACCTCAACGACCAGAAGGGCAAAGGATTTTCAGGTACAATGGATGTTGTTTCAAATATGATCGATTTGTCTGAGGCGTGGCTTCAGGGGAACTCCTTTGATGGATATATCCCTGACATGTCTCGTTGTACCGCCTTACAAGATTTACGACTTGCGCACAATCGATTTACAGGTGTGGTTCCAGATTCTCTGATAAATCTCAGTCGCAGGAACCTGCAAACTGTTACTTTGAACAACAACTTTTTTCAGGGTCCTATGCCTAACATTTTAGGAGATTCTGACACTACGAATCTTGGAGATAACACCACCAATGCCTTTTGTCGAGACGACTATGATCCTTGTGACCAGAGAGTTACCATTTTGCTTGAAATTGCATCTGCATTTGGATATCCTTATTTGTTGGCCCGTTCATGGCGAGGAAATAATCCATGTCATAATTGGAGTTTTGTTGCATGTACTGGGGGTCTGATCACAACCGTGAATTTGACAAGGCAGAACTTGACAGGAACTATCTCAGATGCATTTGGTAAATTAACTCATTTGGAAAACTTGTATCTAAGTGGTAACAATTTAAGCGGTTCAATACCTGAAAACTTGACATCTCTTCATCAACTCAACAATCTCGATGTCTCCAACAACAACTTATCAGGAAAAATTCCCAATTTCTCACGTGGAGTATACCTGAATACTGAAGGTAACCCTTCGTTTGAGAGAAGAAAACCTTTGGGCAAGAGAAGAAAGCCACCTGCTTGGATCAAAGGCGCAATAGTAGCAGCAGCAGGTATTGGAGGTCTTGTTTTCTTGGTTGTAGTTATTTGTAACCGAAAGAGGTGTCTTAGCTTGTTACAAAGGATTTTGTGGAAGAAAACAGGACCATTTATTGATAATGAATTTGAAGAATTTATGAAAACTTATGGATCTTTGATGTTAAGGAGATATAATTATTCTGAAGTGAAAAGCATGACAAACTCATTTCGTGATAAATTAGGAAGGGGAGGATATGGCATTGTATACAAAGCATGCTTAAGTGATGGTTGTCCGGTAGCAGTGAAGGTGTTGACCGAATCTAGCGGAAGTGGGGAGGAATTCCTAAATGAGGTAGCTAGTATTGGTAGAACTTCTCATATGAACATTGTCTCGCTGTTGGGATTTTGCTATGAAAAATATAAAAGGGCACTCATCTATGAATTCATGCCAAATGGTTCTTTGGATAAGTTTATCTACAAACAAGAATCTCCCAATGCTATTTGTAATTTGGATTGGAATACATTGTTTCAAATTACAATTGGTATTGCGCGAGGATTAGAATATTTGCACCGAGGATGTGCGGCAAGAATTTTGCATCTTGATATTAAACCTCAAAATATTCTGTTAGATGAAGATTTTTGTCCAAAAATTGCTGATTTTGGATTGGCAAAAATATGCAAAAAGAAAGAGAGTATTGTATCTTTACAAGGTACAAGAGGAACTCCTGGATACATTGCACCAGAAGTATTTAGCCGAACTTTTGGTAAAGTTTCTCACAAATCTGATGTGTATAGTTATGGAATGTTGATTCTTGAATTGGTGGGAGGTAGAAAGAACTACGACACTGGCGGATCACTTACCAGTGAAATGTACTTTCCAGATTGGATTTATAAGGATCTTGAGGAGCAAAATATCCTTGGACGGGGTTTGTCCACTACAGAAGAAGAAAGTGATATGATAAAGAAAATTACTTTGGTGAGTTTATGGTGCATTCAAACAAATCCATTGGATAGACCAGCAATAAACAAAGTAGTAGAAATGTTAGAAGGACCACTTCAGTCAGTGCCATATCCTCCAAAACCTGTCTTATATTCTCCTCAAATGTCTATCTCACAATTTTCACAAATCTCCTATAACAGTACAGATGAGGAGGATTCTGAGATTGTTGAGGAGACTATTTCCATCAATAAAATGAGTTCAAAATTTGCAAAGTAA 3054 0.4122 MTYLKSESKILIGFYTLVLFFMTSVLSDEEGAYMLKLMNALKPPGWSNTTHMCQWTGVSCNNQSRRIEEIFLKEMSLTGTVPAGLNDSLSQLTYLYLSYNNLSGPVPSLANLSFLQVAYLDNNNFTTIPHGCFHGLTTLHSLLLNNNTNLPPWNFPTDLTAHSSQLHVLDLSSTNLMGSVPNISHSFATLRYLSLSNNNLSSIPEDCFHNLTSLDVLSLANNTNLAPWTFPLDLIHSSFKLSYLDLEVTNLMGSLPNLSHFFPDLNTISLSNNNLTFIPQGCFQALPYLGLLKLGNNTNLTPWTFPDLIQSTKIEELNLVATNVMGSLPEIFDSLTSLETLLLSNNSLTGVLPESFGRSKITTLHLNDQKGKGFSGTMDVVSNMIDLSEAWLQGNSFDGYIPDMSRCTALQDLRLAHNRFTGVVPDSLINLSRRNLQTVTLNNNFFQGPMPNILGDSDTTNLGDNTTNAFCRDDYDPCDQRVTILLEIASAFGYPYLLARSWRGNNPCHNWSFVACTGGLITTVNLTRQNLTGTISDAFGKLTHLENLYLSGNNLSGSIPENLTSLHQLNNLDVSNNNLSGKIPNFSRGVYLNTEGNPSFERRKPLGKRRKPPAWIKGAIVAAAGIGGLVFLVVVICNRKRCLSLLQRILWKKTGPFIDNEFEEFMKTYGSLMLRRYNYSEVKSMTNSFRDKLGRGGYGIVYKACLSDGCPVAVKVLTESSGSGEEFLNEVASIGRTSHMNIVSLLGFCYEKYKRALIYEFMPNGSLDKFIYKQESPNAICNLDWNTLFQITIGIARGLEYLHRGCAARILHLDIKPQNILLDEDFCPKIADFGLAKICKKKESIVSLQGTRGTPGYIAPEVFSRTFGKVSHKSDVYSYGMLILELVGGRKNYDTGGSLTSEMYFPDWIYKDLEEQNILGRGLSTTEEESDMIKKITLVSLWCIQTNPLDRPAINKVVEMLEGPLQSVPYPPKPVLYSPQMSISQFSQISYNSTDEEDSEIVEETISINKMSSKFAK 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04313 1017 Pfam Leucine rich repeat 522 579 IPR001611 GO:0005515
Arst4g04313 1017 Pfam Leucine rich repeat 165 222 IPR001611 GO:0005515
Arst4g04313 1017 Gene3D Transferase(Phosphotransferase) domain 1 762 968 - -
Arst4g04313 1017 FunFam S-receptor-like serine/threonine-protein kinase 658 761 - -
Arst4g04313 1017 Pfam Leucine Rich Repeat 337 357 IPR001611 GO:0005515
Arst4g04313 1017 FunFam PR5-like receptor kinase 762 971 - -
Arst4g04313 1017 SUPERFAMILY L domain-like 49 367 - -
Arst4g04313 1017 ProSiteProfiles Protein kinase domain profile. 687 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04313 1017 ProSiteProfiles Leucine-rich repeat profile. 189 210 IPR001611 GO:0005515
Arst4g04313 1017 Pfam Protein kinase domain 691 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04313 1017 ProSitePatterns Protein kinases ATP-binding region signature. 693 715 IPR017441 GO:0005524
Arst4g04313 1017 SMART serkin_6 687 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04313 1017 Gene3D Phosphorylase Kinase; domain 1 660 761 - -
Arst4g04313 1017 Gene3D Ribonuclease Inhibitor 479 604 IPR032675 -
Arst4g04313 1017 SMART LRR_typ_2 211 232 IPR003591 -
Arst4g04313 1017 SMART LRR_typ_2 262 285 IPR003591 -
Arst4g04313 1017 SMART LRR_typ_2 112 135 IPR003591 -
Arst4g04313 1017 SMART LRR_typ_2 335 358 IPR003591 -
Arst4g04313 1017 SMART LRR_typ_2 542 566 IPR003591 -
Arst4g04313 1017 SMART LRR_typ_2 187 210 IPR003591 -
Arst4g04313 1017 SMART LRR_typ_2 407 430 IPR003591 -
Arst4g04313 1017 SMART LRR_typ_2 89 111 IPR003591 -
Arst4g04313 1017 Gene3D Ribonuclease Inhibitor 233 476 IPR032675 -
Arst4g04313 1017 Gene3D Ribonuclease Inhibitor 27 232 IPR032675 -
Arst4g04313 1017 PANTHER OSJNBA0070M12.3 PROTEIN 241 964 - -
Arst4g04313 1017 SUPERFAMILY RNI-like 311 588 - -
Arst4g04313 1017 CDD STKc_IRAK 693 963 - -
Arst4g04313 1017 ProSiteProfiles Leucine-rich repeat profile. 91 113 IPR001611 GO:0005515
Arst4g04313 1017 FunFam Leucine-rich repeat receptor-like kinase 480 603 - -
Arst4g04313 1017 ProSiteProfiles Leucine-rich repeat profile. 544 567 IPR001611 GO:0005515
Arst4g04313 1017 Pfam Leucine rich repeat N-terminal domain 28 61 IPR013210 -
Arst4g04313 1017 Pfam Leucine rich repeat N-terminal domain 482 516 IPR013210 -
Arst4g04313 1017 SMART LRR_bac_2 542 562 - -
Arst4g04313 1017 SMART LRR_bac_2 187 206 - -
Arst4g04313 1017 SMART LRR_bac_2 335 355 - -
Arst4g04313 1017 SMART LRR_bac_2 566 586 - -
Arst4g04313 1017 SMART LRR_bac_2 89 109 - -
Arst4g04313 1017 SMART LRR_sd22_2 542 565 - -
Arst4g04313 1017 SMART LRR_sd22_2 566 588 - -
Arst4g04313 1017 SMART LRR_sd22_2 89 114 - -
Arst4g04313 1017 SUPERFAMILY Protein kinase-like (PK-like) 666 961 IPR011009 -
Arst4g04313 1017 ProSitePatterns Serine/Threonine protein kinases active-site signature. 810 822 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04313 Arst-Chr4 121111631 121115636 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04313 673 983 Receptor kinase-like Gene Family AT5G38280 59.683 5.72e-125 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst4g04313 Pkinase 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04313 - K00924 aip:107635702 1872.83