Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04312 ATGGAGAGTCTTTATCTCTCTAACAACAACCTCTCCTCCATCCCTGAGGGTTGCTTCCACAACCTAACCAGTTTGGGTTTCCTCTCTTTGGCCAACAACACCAACCTCCCACCATGGACCTTCCCCCTCGATTTGACTCATTCCTCATTGCAACTCTACTTTCTCAACCTCGAGGCTACAAATCTCATGGGATCCCTACCAAACTTATCTCATTTCTTCCCCGACTTGAATACCGTTTCTCTCTCCAACAACAACCTTACCTCCATCCCCCAAGGTTGCTTCCAGGGTCTACCCTCTTTGACGTGGCTGTGGTTGGAAAACAACACCAACCTTGCACCATGGACCTTCCCCGACTTGACTCTCTCCACACAACTGAAAGAGCTCAAGCTTGCTGCTACAAATGTTGTGGGCCCTCTACCAGAAATATTTGACTCCTTGACAAGTTTGGAGACTCTTCTTCTCTCCAACAACAACCTCACTGGTGTCTTGCCTCAGTCTTTTCAAAGGTCCAAGATTACCACATTGCACCTCAACGACCAGAAGGGCAAAGGATTTTCAGGTACAATGGATGTTGTTTCAAATATGATCGATTTGTCTGAAGCGTGGCTTCAGGGGAACTCCTTCGATGGATATATCCCTGACATGTCTCGTTGTACCGCCTTACAAGATTTACGACTTGCGCACAATCGATTTACAGGTGTCATTCCATATTCTCTGATAAATCTCGTTGACGGGAACCTGCAAACTGTTACTTTGAACAACAACTTTTTTCAGGGTCCTATGCCTAACATTTTAGGAGATTCTGACACTACGAATCTTGGAGATAACACCACCAATGCCTTTTGTCGAGACCACTATGATCCGTGTGACGAGAGAGTTACCATTTTGCTTGAAATTGCATCTGCATTTGGATATCCTTATTTGTTGGCCACTTCATGGCTAGGAAATAATCCATGTCATAATTGGAGTTTTGTTGTATGTACTGGGAGTATGATTACAACCGTGAATTTGACAAGGCAGAATTTGACAGGAACTATCTCAGGTGCATTTGGTAAATTAACTCATTTGGAAAACTTGTATCTAAGTGGTAACAATTTAAGCGGTTCAATACCTGAAAACTTGACATCCCTTCATCAACTCAACAATCTCGATGTCTCCAACAACTTCTTATCAGGAAAAGTTCCCGATTTCTCACGTGGAGTAAACCTGAATACTGAAGGTAATCCTTCGTTCGAGAGAAGAAATCCTTCGCCTGAGAGAAGAAATCCTTCGCACAAGAGAAGAAATCCACCTGCTTGGATCAAAGGTGCAATAGCAGCAGCAGCAGGTATTGGAGGTCTTGTTTTCTTGGTTATAATTATTTATAACCGGAAGAGGTGTCTTAGCTTCTTACAATGGATTTTGTGGAAGAAAACAGGACCATTTATTGATAATGAATTTGAAGAATTTATGAAAACTTATGGATCTTTGATGTTAAAGAGATATAATTATTCTGAAGTGAAAAAGATGACAAATTCATTTCATGATAAATTAGGAAAGGGAGGATATGGCATTGTATACAAAGCATGCTTAAGTGATGGTTGTCCAGTGGCAGTGAAGGTATTAACCGAATCCAGCGGAAGTGGGGAGGAATTCCTAAATGAGGTAGCTAGTATTGGAAGAACATCTCATGTGAACATTGTTTCGCTTTTGGGATTTTGTTATGAGAAGTATAAAAGGGCACTCATCTACGAATTCATGCCAAATGGTTCTTTGGATAAGTTCATCTACAAACAAGAATCGTCAAATGCTATTTGTAATATGGATTGGAACACCCTGTTTCAAATTACAATTGGTATTGCAAGAGGATTAGAATATTTGTATCGAGGTTGTAATACAAGAATTTTGCATCTCGATATTAAGCCTCAAAATATTCTGTTAGATGAAGATTTTTGTCCGAAAATTGCTGATTTTGGATTGGCAAAAATTTGCAAGAAGAAGGAGAGTATTGTATCTATAATAGGTACAAGGGGAACTCCTGGATACATTGCACCAGAAGTATTTAGTCGAACCTTTGGTAAAGTTTCTCATAAATCTGATGTGTACAGTTATGGTATGTTGATTCTTGAATTGATGGGAGGCAAAAAGAACTACAACACCAGTGGATCACTTACTAGTGAGATGTATTTTCCAGATTGGATTTACAAGGATCTCGAGCAAAATACGCTTGGACGAGGTTTGCCCACTACAGAAGAAGAAAATGATATGATAAAAAAAATTACTTTGGTGAGTTTATGGTGTATTCAAACAAATCCATCAGATAGACCATCAATAGATAAAGTAATAGAGATGTTAGAAGGGCCACTTGAACTAGTGCCATATCCTCCAAAACCTGTCTTATATTCTCTAAAAATGTCTATCTCACAGTTTTCACAAATCTCCTATAGCAGTACAGATGAGGAGGATCCTGAAATTGTTGAGGAGATTATTTCCATCAAATAA 2481 0.3958 MESLYLSNNNLSSIPEGCFHNLTSLGFLSLANNTNLPPWTFPLDLTHSSLQLYFLNLEATNLMGSLPNLSHFFPDLNTVSLSNNNLTSIPQGCFQGLPSLTWLWLENNTNLAPWTFPDLTLSTQLKELKLAATNVVGPLPEIFDSLTSLETLLLSNNNLTGVLPQSFQRSKITTLHLNDQKGKGFSGTMDVVSNMIDLSEAWLQGNSFDGYIPDMSRCTALQDLRLAHNRFTGVIPYSLINLVDGNLQTVTLNNNFFQGPMPNILGDSDTTNLGDNTTNAFCRDHYDPCDERVTILLEIASAFGYPYLLATSWLGNNPCHNWSFVVCTGSMITTVNLTRQNLTGTISGAFGKLTHLENLYLSGNNLSGSIPENLTSLHQLNNLDVSNNFLSGKVPDFSRGVNLNTEGNPSFERRNPSPERRNPSHKRRNPPAWIKGAIAAAAGIGGLVFLVIIIYNRKRCLSFLQWILWKKTGPFIDNEFEEFMKTYGSLMLKRYNYSEVKKMTNSFHDKLGKGGYGIVYKACLSDGCPVAVKVLTESSGSGEEFLNEVASIGRTSHVNIVSLLGFCYEKYKRALIYEFMPNGSLDKFIYKQESSNAICNMDWNTLFQITIGIARGLEYLYRGCNTRILHLDIKPQNILLDEDFCPKIADFGLAKICKKKESIVSIIGTRGTPGYIAPEVFSRTFGKVSHKSDVYSYGMLILELMGGKKNYNTSGSLTSEMYFPDWIYKDLEQNTLGRGLPTTEEENDMIKKITLVSLWCIQTNPSDRPSIDKVIEMLEGPLELVPYPPKPVLYSLKMSISQFSQISYSSTDEEDPEIVEEIISIK 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04312 826 Gene3D Phosphorylase Kinase; domain 1 478 579 - -
Arst4g04312 826 SUPERFAMILY Protein kinase-like (PK-like) 485 778 IPR011009 -
Arst4g04312 826 ProSiteProfiles Leucine-rich repeat profile. 75 96 IPR001611 GO:0005515
Arst4g04312 826 ProSiteProfiles Leucine-rich repeat profile. 355 378 IPR001611 GO:0005515
Arst4g04312 826 FunFam Leucine-rich repeat receptor-like kinase 291 414 - -
Arst4g04312 826 Gene3D Ribonuclease Inhibitor 1 42 IPR032675 -
Arst4g04312 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Arst4g04312 826 FunFam serine/threonine-protein kinase PBS1-like 477 579 - -
Arst4g04312 826 Gene3D Ribonuclease Inhibitor 291 414 IPR032675 -
Arst4g04312 826 MobiDBLite consensus disorder prediction 400 429 - -
Arst4g04312 826 ProSiteProfiles Leucine-rich repeat profile. 1 21 IPR001611 GO:0005515
Arst4g04312 826 SUPERFAMILY RNI-like 3 393 - -
Arst4g04312 826 ProSitePatterns Protein kinases ATP-binding region signature. 511 533 IPR017441 GO:0005524
Arst4g04312 826 SMART LRR_typ_2 1 21 IPR003591 -
Arst4g04312 826 SMART LRR_typ_2 97 118 IPR003591 -
Arst4g04312 826 SMART LRR_typ_2 146 169 IPR003591 -
Arst4g04312 826 SMART LRR_typ_2 73 96 IPR003591 -
Arst4g04312 826 SMART LRR_typ_2 353 377 IPR003591 -
Arst4g04312 826 SMART LRR_typ_2 22 43 IPR003591 -
Arst4g04312 826 Pfam Leucine rich repeat 333 388 IPR001611 GO:0005515
Arst4g04312 826 Pfam Leucine rich repeat 55 108 IPR001611 GO:0005515
Arst4g04312 826 Pfam Protein kinase domain 508 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04312 826 ProSiteProfiles Protein kinase domain profile. 505 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04312 826 Gene3D Ribonuclease Inhibitor 43 287 IPR032675 -
Arst4g04312 826 Pfam Leucine Rich Repeat 148 168 IPR001611 GO:0005515
Arst4g04312 826 Pfam Leucine Rich Repeat 2 22 IPR001611 GO:0005515
Arst4g04312 826 FunFam PR5-like receptor kinase 580 787 - -
Arst4g04312 826 PANTHER OSJNBA0070M12.3 PROTEIN 52 783 - -
Arst4g04312 826 Gene3D Transferase(Phosphotransferase) domain 1 580 784 - -
Arst4g04312 826 SMART serkin_6 505 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04312 Arst-Chr4 121104387 121107161 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04312 491 795 Receptor kinase-like Gene Family AT5G38280 63.226 3.30e-129 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Arst4g04312 Pkinase 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04312 - K00924 aip:107635702 1380.16