Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04310 ATGAAACAACAAACTATGTTGTCCCTCTCTTCTTTCTCTTCTTTCTCCATCACCATTTTCTTCTTCTTTATCTTCATATTCTCTCTTCTTCACCCTACAACTCCGCTTCCTTCCAATGCATCATTCTCCCTCTGCAGCAACACTACATTCAACTGTGGCAACATCACCAACGTTTCCTACCCTTTCACCGGCGCCGACCGCCCCTTCTTCTGCGGTCCGCCGGAGTTCCATTTGACATGCAACGACGGCATCCCTGAGTTAAACATCTTGTTGGTTCGCTACCGAGTCCTCCAACTTGATTCAGTAGCTCAAAGCCTCACCATAGCTAGAGCAGACCTTTGGAACAAAACATGCACCAACGTGCACTTAAACTCAACCATTGATGATGGAACTGGTAGCTTCACCTATGGTTCCGGGAACAAGAACCTTACTTTGTTCTATGGGTGTGGACCATCTATGTTAAACATAACTCCTGTTAATTTGTTTCACTGTGATAGTGGTTATGGGAATAAAAGTGATTCCTACTCTTTGATTGGTCCTTTGCCTATGGATCCTATTCTTAGCATTGTTCATTGTGAGCTTGGTGTTGAGGTTCCTATTCTTGAAGATCAGGCTAATAGGCTCATAGGGAACAGGTCTTTGCTTAGGGAGGTTTTGATGAAGGGTTTTAATGTGAGTTATAGCAATAATCATTATGAGAGCGAGTGTTTGAAGTGTGTTATTGGTGATGGTGGCCAGTGTGGGTTTGATTTTGATTCAAATAAAGTTATTTGCATTTGTGATGATCAGTTGTGTTCATCTTCAGGGAAAAGTACTAACAAAGCAGCTATTGCAGCAGGTGCTGCTTCAGGAGCTGTAGTCTTTGTTGTCCTTCTTATAGGTACACTTTTTGTGGTAAGAAGAAGGAGAAGAAATGCTGAAAGATCAAGAAGCAACAAGGATATTTTGCCTCTGAGTGGAGTCCCTCTTACATCTTCAACTACAAGTAGTAGTAACACATCTCAGAGTGTTTCTTCTTACCCTTCCTCCAAGTCTGATTCTGTGCCAAAGAGTTACTACTATGGTGTTCAAGTGTTTGACTATGCTGAACTTGAAGAAGCTACCAACAATTTTGACCCTTCTAGAGAACTTGGTGAGGGAGGCTTTGGCACTGTTTACAAAGGTATGCTTCAAGATGGGCGTGTAGTTGCAGTGAAACGCCACTATGAAAGCCATTTAAAGCGTGTTGAGCAATATATGAATGAAGTTGAGATTCTAGCACACTTGAGGCACAAGAATTTGGTCACACTCTTTGGCTGCACTTCAAGACACAGCAGAGAACTCATCCTTGTTTATGAGTTCATACCTAATGGAACACTAGCCGATCACCTCCATGGAAGCCTTGCAAATTCCACCTTACTTACTTGGAATGTAAGATACAAAGTTGCACTCGAAACAGCCGAGGCGCTCTCCTACCTTCACTCTAAGAAAGTTATACACAGAGATGTTAAGTCCACAAACATTCTGCTGACAGAGACTTTTCAAGTTAAGGTTGGTGATTTTGGACTATCAAGGTTGTTTCCTAAATTTGTTACTCATGTCTCAACAGCGCCACAAGGCACACCTGGCTATGTTGATCCGGAGTATTACCAGAACTACCAACTAACTGATAAGAGTGATGTTTATAGCTTTGGAGTTGTGTTGGTTGAGCTTATATCTTCATTGCAAGCAGTGGACATAACCCGGAACCGGAACGAAGTTAACTTGGCTAGTCTTGCAGTGAATAGGATACAGAACCAAGAATTGCATGAAATGGTTGATCCATGTCTTGGATTTGAGAAGGACAATGATGTAAGGAGGATGGTAACTGCTGTTGCTGAATTGGCATTTAGGTGCTTGCAGCAGCAGAGAGATATGAGGCCCTCCATGGATGAAGTTCTTGAGATCTTGAGAGGGGTAAAGGGTGATGAGTTTGGTGCATTAGAGAGAAACTCATCAGAATCAGTGGTGGGTGTTAACCATAATAAGACAGAGGAGGTTATACTTTTGAAGAAGGTTCCACCACCAGTTTCACCAGATTCTGTTGCTGATAAATGGGTTAGCAGCTCTTCTACATCTAGCACTTCATAG 2109 0.4239 MKQQTMLSLSSFSSFSITIFFFFIFIFSLLHPTTPLPSNASFSLCSNTTFNCGNITNVSYPFTGADRPFFCGPPEFHLTCNDGIPELNILLVRYRVLQLDSVAQSLTIARADLWNKTCTNVHLNSTIDDGTGSFTYGSGNKNLTLFYGCGPSMLNITPVNLFHCDSGYGNKSDSYSLIGPLPMDPILSIVHCELGVEVPILEDQANRLIGNRSLLREVLMKGFNVSYSNNHYESECLKCVIGDGGQCGFDFDSNKVICICDDQLCSSSGKSTNKAAIAAGAASGAVVFVVLLIGTLFVVRRRRRNAERSRSNKDILPLSGVPLTSSTTSSSNTSQSVSSYPSSKSDSVPKSYYYGVQVFDYAELEEATNNFDPSRELGEGGFGTVYKGMLQDGRVVAVKRHYESHLKRVEQYMNEVEILAHLRHKNLVTLFGCTSRHSRELILVYEFIPNGTLADHLHGSLANSTLLTWNVRYKVALETAEALSYLHSKKVIHRDVKSTNILLTETFQVKVGDFGLSRLFPKFVTHVSTAPQGTPGYVDPEYYQNYQLTDKSDVYSFGVVLVELISSLQAVDITRNRNEVNLASLAVNRIQNQELHEMVDPCLGFEKDNDVRRMVTAVAELAFRCLQQQRDMRPSMDEVLEILRGVKGDEFGALERNSSESVVGVNHNKTEEVILLKKVPPPVSPDSVADKWVSSSSTSSTS 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04310 702 Gene3D Phosphorylase Kinase; domain 1 342 447 - -
Arst4g04310 702 MobiDBLite consensus disorder prediction 680 702 - -
Arst4g04310 702 MobiDBLite consensus disorder prediction 323 348 - -
Arst4g04310 702 Gene3D Transferase(Phosphotransferase) domain 1 448 652 - -
Arst4g04310 702 ProSiteProfiles Protein kinase domain profile. 371 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04310 702 Pfam Protein kinase domain 374 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04310 702 SUPERFAMILY Protein kinase-like (PK-like) 344 643 IPR011009 -
Arst4g04310 702 Pfam Wall-associated receptor kinase galacturonan-binding 45 109 IPR025287 GO:0030247
Arst4g04310 702 SMART serkin_6 371 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04310 702 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 19 698 IPR044652 GO:0004672
Arst4g04310 702 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 347 447 - -
Arst4g04310 702 ProSitePatterns Protein kinases ATP-binding region signature. 377 399 IPR017441 GO:0005524
Arst4g04310 702 Pfam Wall-associated receptor kinase C-terminal 188 263 IPR032872 -
Arst4g04310 702 FunFam Wall-associated receptor kinase-like 20 448 655 - -
Arst4g04310 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 491 503 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04310 Arst-Chr4 121097106 121099916 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04310 50 702 Receptor kinase-like Gene Family AT1G25390 40.537 1.00e-141 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Arst4g04310 Pkinase 2.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04310 - - aip:107635700 861.292