Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04309 ATGAAACCTCTTTGTCGTCTTCGCCGCCTATATTCCATATGGATGTTCATCTTGGCTCTTCTCGTCACGGCAACCGACGTTCCTACATCTGTAGGTGCTGCTGATAACGTTGATTACTTGGCGTGCAAGAACACTTTAAGCTGTGGAACCGTCAACCAACTCACTTACCCTTTCTGGGGTCAAATTGACAACACTAATAACAGGCCAAACTCTTGCGGTGAGCCTAACTTGCAGATCACATGTGAAGATAAAAACAATAATAATGGGGTCCCAAAGTTCACAGTGGATTCTGTCAAATACAGGATTCTTGATTGGGAGTGGGACATCAGTAAACAGAATCTGACAGTTGCTAGGGACGATTACTTTAGTACTAGCTTTGATTTCTGTTCAGGAGATTTCAGCAACAACACCTTGGATAAAACCATACTTCAATATGATGATAACAGTGTTGTTAATATCACACTCTTGTACAAGTGTTCTTCAGAAACAAAGCCTTCTTCGGATCAGTTTACGTTTGTTCAAAGTTGCAACAGCGGTAGTGTCTACTATGCTGAACAAGATGATAATAAGGCGCTGCCTTATTATGAAGGTTGCAGCACTGTTATTTTTCCTGTTTCAAAGTCCCTAGCTTCGGCTTTTGCTAACAGTGCCAGTAACCCCATTACTACTATAATTCAGCAAGCGTTGCAAGGTGGTTTTGTCTTGAAATTATTGCCTCAAATCAATGATAAGTGCAGGGGATGCACTAACTCAGGTGGCAATTGTGGCAGCAATGATGGACATTTCGTCTGTTACTGTAACGATGGAACTCATCAAAATTCTTGTTCAGGGAAAAGTACTAACAAAGCAGCTATTGCAGCAGGTGCTGCTTCAGGAGCTGTAGTCTTTGTTGTCCTTCTTATAGGTACACTTTTTGTGGTAAGAAGAAGGAGAAGAAATGCTGAAAGATCAAGAAGCAACAAGGATATTTTGCCTCTGAGTGGAGTCCCTCTTACATCTTCAACTACAAGTAGTAGTAACACATCTCAGAGTGTTTCTTCTTACCCTTCCTCCAAGTCTGATTCTGTGCCAAAGAGTTACTACTATGGTGTTCAAGTGTTTGACTATGCTGAACTTGAAGAAGCTACCAACAATTTTGACCCTTCTAGAGAACTTGGTGAGGGAGGCTTTGGCACTGTTTACAAAGGTATGCTTCAAGATGGGCGTGTAGTTGCAGTGAAACGCCACTATGAAAGCCATTTAAAGCGTGTTGAGCAATATATGAATGAAGTTGAGATTCTAGCACACTTGAGGCACAAGAATTTGGTCACACTCTTTGGCTGCACTTCAAGACACAGCAGAGAACTCATCCTTGTTTATGAGTTCATACCTAATGGAACACTAGCCGATCACCTCCATGGAAGCCTTGCAAATTCCACCTTACTTACTTGGAATGTAAGATACAAAGTTGCACTCGAAACAGCCGAGGCGCTCTCCTACCTTCACTCTAAGAAAGTTATACACAGAGATGTTAAGTCCACAAACATTCTGCTGACAGAGACTTTTCAAGTTAAGGTTGGTGATTTTGGACTATCAAGGTTGTTTCCTAAATTTGTTACTCATGTCTCAACAGCGCCACAAGGCACACCTGGCTATGTTGATCCGGAGTATTACCAGAACTACCAACTAACTGATAAGAGTGATGTTTATAGCTTTGGAGTTGTGTTGGTTGAGCTTATATCTTCATTGCAAGCAGTGGACATAACCCGGAACCGGAACGAAGTTAACTTGGCTAGTCTTGCAGTGAATAGGATACAGAACCAAGAATTGCATGAAATGGTTGATCCATGTCTTGGATTTGAGAAGGACAATGATGTAAGGAGGATGGTAACTGCTGTTGCTGAATTGGCATTTAGGTGCTTGCAGCAGCAGAGAGATATGAGGCCCTCCATGGATGAAGTTCTTGAGATCTTGAGAGGGGTAAAGGGTGATGAGTTTGGTGCATTAGAGAGAAACTCATCAGAATCAGTGGTGGGTGTTAACCATAATAAGACAGAGGAGGTTATACTTTTGAAGAAGGTTCCACCACCAGTTTCACCAGATTCTGTTGCTGATAAATGGGTTAGCAGCTCTTCTACATCTAGCACTTCATAG 2133 0.4196 MKPLCRLRRLYSIWMFILALLVTATDVPTSVGAADNVDYLACKNTLSCGTVNQLTYPFWGQIDNTNNRPNSCGEPNLQITCEDKNNNNGVPKFTVDSVKYRILDWEWDISKQNLTVARDDYFSTSFDFCSGDFSNNTLDKTILQYDDNSVVNITLLYKCSSETKPSSDQFTFVQSCNSGSVYYAEQDDNKALPYYEGCSTVIFPVSKSLASAFANSASNPITTIIQQALQGGFVLKLLPQINDKCRGCTNSGGNCGSNDGHFVCYCNDGTHQNSCSGKSTNKAAIAAGAASGAVVFVVLLIGTLFVVRRRRRNAERSRSNKDILPLSGVPLTSSTTSSSNTSQSVSSYPSSKSDSVPKSYYYGVQVFDYAELEEATNNFDPSRELGEGGFGTVYKGMLQDGRVVAVKRHYESHLKRVEQYMNEVEILAHLRHKNLVTLFGCTSRHSRELILVYEFIPNGTLADHLHGSLANSTLLTWNVRYKVALETAEALSYLHSKKVIHRDVKSTNILLTETFQVKVGDFGLSRLFPKFVTHVSTAPQGTPGYVDPEYYQNYQLTDKSDVYSFGVVLVELISSLQAVDITRNRNEVNLASLAVNRIQNQELHEMVDPCLGFEKDNDVRRMVTAVAELAFRCLQQQRDMRPSMDEVLEILRGVKGDEFGALERNSSESVVGVNHNKTEEVILLKKVPPPVSPDSVADKWVSSSSTSSTS 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04309 710 ProSiteProfiles Protein kinase domain profile. 379 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04309 710 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 355 455 - -
Arst4g04309 710 Gene3D Transferase(Phosphotransferase) domain 1 456 660 - -
Arst4g04309 710 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 15 706 IPR044652 GO:0004672
Arst4g04309 710 CDD STKc_IRAK 385 651 - -
Arst4g04309 710 ProSitePatterns Protein kinases ATP-binding region signature. 385 407 IPR017441 GO:0005524
Arst4g04309 710 SMART serkin_6 379 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04309 710 FunFam Wall-associated receptor kinase-like 20 456 663 - -
Arst4g04309 710 SUPERFAMILY Protein kinase-like (PK-like) 352 651 IPR011009 -
Arst4g04309 710 Pfam Wall-associated receptor kinase C-terminal 185 269 IPR032872 -
Arst4g04309 710 Gene3D Phosphorylase Kinase; domain 1 350 455 - -
Arst4g04309 710 Pfam Protein kinase domain 382 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04309 710 MobiDBLite consensus disorder prediction 688 710 - -
Arst4g04309 710 Pfam Wall-associated receptor kinase galacturonan-binding 42 104 IPR025287 GO:0030247
Arst4g04309 710 ProSitePatterns Serine/Threonine protein kinases active-site signature. 499 511 IPR008271 GO:0004672|GO:0006468
Arst4g04309 710 MobiDBLite consensus disorder prediction 326 356 - -
Arst4g04309 710 MobiDBLite consensus disorder prediction 316 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04309 Arst-Chr4 121092915 121099916 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04309 147 710 Receptor kinase-like Gene Family AT1G25390 43.134 1.90e-146 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Arst4g04309 Pkinase 2.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04309 - - aip:107635700 832.787