Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04308 ATGGCTTCTCTGCTTTTTATGCTCCTCCCTCACTTAATGATCCTCTTGATATTGATTCAGATTCCTCCATTCTTAAGCTCCAATGATGATAACTATACAAGTTGTGTTGATACTCGCTATGATTGTGGGAAGATTAACAACATTGGTTTTCCATTTTGGGGAGGAAATCGTCCAAAGCAGTGTGGCCACCCTCTTCTACAACTCAACTGTGATCATGATCATGACTCCACTACTTACATAACCATCAAGAACATGAGATACCGGGTTTTGGAAGCATACCCGGAAAACCAAACCATGAAGATAGCAAGAGTTGACTACTTTGAAGGTCTATGCCCTTCAAAACCAGTAAACACAAGCCTTGACTTCGAGCTCTTTGATTATGGGCCTGGCAATAAGAATCTTACCCTCTTCTATCATTGTAATGGATTGTCCAATTCCATCCCCGGATTTCTTAATTGTTTCTCAAATAGAACTTCAAATGAATACTTTTATGCTAGGCCTGAAGCTCTAGGTGCTCCTCCTTCTAGTGTTGTTTGCAGAACAAGTGTGTTTATTCCATTGTTGTTGCAACTTGATGTTGAAGTGGAGTTGTCATGGAACAACATAGAAGGTGCTATCCAAAATGGATTCTTGGTGAAATGGATAGGAAGTGTAACAGAATGTTTCAAGTGTATGAACTCAGGTGCAGGTGGAGCCTGTGGCTATGATTGGAATTCAAATCAACCAACATGTTATTGCAAAGATGAGTCTGGCTATTCATATTTGGATGATGGGCACATCAAAATCTGTGATGCTTCTGCCACCTCACCAACTCAAGATGATCATGGACGTTCAGGGAAAAGTACTAACAAAGCAGCTATTGCAGCAGGTGCTGCTTCAGGAGCTGTAGTCTTTGTTGTCCTTCTTATAGGTACACTTTTTGTGGTAAGAAGAAGGAGAAGAAATGCTGAAAGATCAAGAAGCAACAAGGATATTTTGCCTCTGAGTGGAGTCCCTCTTACATCTTCAACTACAAGTAGTAGTAACACATCTCAGAGTGTTTCTTCTTACCCTTCCTCCAAGTCTGATTCTGTGCCAAAGAGTTACTACTATGGTGTTCAAGTGTTTGACTATGCTGAACTTGAAGAAGCTACCAACAATTTTGACCCTTCTAGAGAACTTGGTGAGGGAGGCTTTGGCACTGTTTACAAAGGTATGCTTCAAGATGGGCGTGTAGTTGCAGTGAAACGCCACTATGAAAGCCATTTAAAGCGTGTTGAGCAATATATGAATGAAGTTGAGATTCTAGCACACTTGAGGCACAAGAATTTGGTCACACTCTTTGGCTGCACTTCAAGACACAGCAGAGAACTCATCCTTGTTTATGAGTTCATACCTAATGGAACACTAGCCGATCACCTCCATGGAAGCCTTGCAAATTCCACCTTACTTACTTGGAATGTAAGATACAAAGTTGCACTCGAAACAGCCGAGGCGCTCTCCTACCTTCACTCTAAGAAAGTTATACACAGAGATGTTAAGTCCACAAACATTCTGCTGACAGAGACTTTTCAAGTTAAGGTTGGTGATTTTGGACTATCAAGGTTGTTTCCTAAATTTGTTACTCATGTCTCAACAGCGCCACAAGGCACACCTGGCTATGTTGATCCGGAGTATTACCAGAACTACCAACTAACTGATAAGAGTGATGTTTATAGCTTTGGAGTTGTGTTGGTTGAGCTTATATCTTCATTGCAAGCAGTGGACATAACCCGGAACCGGAACGAAGTTAACTTGGCTAGTCTTGCAGTGAATAGGATACAGAACCAAGAATTGCATGAAATGGTTGATCCATGTCTTGGATTTGAGAAGGACAATGATGTAAGGAGGATGGTAACTGCTGTTGCTGAATTGGCATTTAGGTGCTTGCAGCAGCAGAGAGATATGAGGCCCTCCATGGATGAAGTTCTTGAGATCTTGAGAGGGGTAAAGGGTGATGAGTTTGGTGCATTAGAGAGAAACTCATCAGAATCAGTGGTGGGTGTTAACCATAATAAGACAGAGGAGGTTATACTTTTGAAGAAGGTTCCACCACCAGTTTCACCAGATTCTGTTGCTGATAAATGGGTTAGCAGCTCTTCTACATCTAGCACTTCATAG 2139 0.4161 MASLLFMLLPHLMILLILIQIPPFLSSNDDNYTSCVDTRYDCGKINNIGFPFWGGNRPKQCGHPLLQLNCDHDHDSTTYITIKNMRYRVLEAYPENQTMKIARVDYFEGLCPSKPVNTSLDFELFDYGPGNKNLTLFYHCNGLSNSIPGFLNCFSNRTSNEYFYARPEALGAPPSSVVCRTSVFIPLLLQLDVEVELSWNNIEGAIQNGFLVKWIGSVTECFKCMNSGAGGACGYDWNSNQPTCYCKDESGYSYLDDGHIKICDASATSPTQDDHGRSGKSTNKAAIAAGAASGAVVFVVLLIGTLFVVRRRRRNAERSRSNKDILPLSGVPLTSSTTSSSNTSQSVSSYPSSKSDSVPKSYYYGVQVFDYAELEEATNNFDPSRELGEGGFGTVYKGMLQDGRVVAVKRHYESHLKRVEQYMNEVEILAHLRHKNLVTLFGCTSRHSRELILVYEFIPNGTLADHLHGSLANSTLLTWNVRYKVALETAEALSYLHSKKVIHRDVKSTNILLTETFQVKVGDFGLSRLFPKFVTHVSTAPQGTPGYVDPEYYQNYQLTDKSDVYSFGVVLVELISSLQAVDITRNRNEVNLASLAVNRIQNQELHEMVDPCLGFEKDNDVRRMVTAVAELAFRCLQQQRDMRPSMDEVLEILRGVKGDEFGALERNSSESVVGVNHNKTEEVILLKKVPPPVSPDSVADKWVSSSSTSSTS 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04308 712 ProSiteProfiles Protein kinase domain profile. 381 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04308 712 ProSitePatterns Protein kinases ATP-binding region signature. 387 409 IPR017441 GO:0005524
Arst4g04308 712 MobiDBLite consensus disorder prediction 318 358 - -
Arst4g04308 712 Pfam Wall-associated receptor kinase C-terminal 174 248 IPR032872 -
Arst4g04308 712 SUPERFAMILY Protein kinase-like (PK-like) 354 653 IPR011009 -
Arst4g04308 712 Gene3D Phosphorylase Kinase; domain 1 352 457 - -
Arst4g04308 712 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 14 708 IPR044652 GO:0004672
Arst4g04308 712 FunFam Wall-associated receptor kinase-like 20 458 665 - -
Arst4g04308 712 Pfam Protein kinase domain 384 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04308 712 Gene3D Transferase(Phosphotransferase) domain 1 458 662 - -
Arst4g04308 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 501 513 IPR008271 GO:0004672|GO:0006468
Arst4g04308 712 MobiDBLite consensus disorder prediction 328 358 - -
Arst4g04308 712 Pfam Wall-associated receptor kinase galacturonan-binding 41 103 IPR025287 GO:0030247
Arst4g04308 712 MobiDBLite consensus disorder prediction 690 712 - -
Arst4g04308 712 SMART serkin_6 381 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst4g04308 712 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 357 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04308 Arst-Chr4 121089548 121099916 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04308 33 712 Receptor kinase-like Gene Family AT1G25390 39.162 7.58e-141 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Arst4g04308 Pkinase 2.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04308 - - aip:107635700 1272.3