Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04292 ATGGCTTGGTTACGCTTGGATAATCGTTGCGATTCTGAATCTGTCGCTTCACTTCCATGGCTTTGGTCCATTCAACATGCTGCAAGCTGCAAGGAAATGGACGTGACTACTTTACAGAGTTTGGTTGATGTAGCCCTTGTTGGGGAAGATGGTTTCTGTGAAAAGACAAGGGAATTGATTTCTCTGAGATGTTTGGAGGCAATGTTTGATCCTGATTCAGCTCATAGAGTTGATTGTGATGATGCTGCTGCAACTAGCCTGGATTCGAGAGTTCGGTTTGCTTTTTCGACAACTTGTGGAGATGTCCTTCGACAGATAGTGGGCGAGGTACCAGTGTCAAATATAATAAAAGATCGAGTTAAGCTTTTGAAATGGGATGTTTCCCAGTTTATTTTGCATAAAAGAGCTGTTCTCAAATGTGACTTAGTGCAGCTGAAAGAATCAATCCTTGATGGTACTCATCCAAATGCTGATTGTTTAAGAGAAGCTGGGCGATTGCAACCTCAGAATGGGGGTTGTCAAGTGCATCTCAATGGCAATGCACACTGTGATCTTTCGAAAAAAGATAATGGGAACTGCACTTATCATGCAAACAAGGAAGTAAAAGAGAACTCAATAACTACAATGTTAGAGAAAGTGACTAAACAATGGAAAGAGTTACTTGAAAAGATTAAATCTTGCAAGAGGAACCAGGTTGAGTCCGTTAATGGTAATGAGCACATGACAGACTGCCAACAAGGAAAGCAAGTTGATATCAGTGAATGGCATGTTTTCCAAGGAAGTGCAAAGAAGATTAGACATAATGAATCTTTAAATGTTGAGTCCAATAAAGAGAAGCCAATCTCTCATGGAGTGGGTAGGTATGATAGGTGGTTTGCTTCCAAGCAATTAGACTCGAGAAGCCACAATGAGGTCCTTCATCATGAGCCACAAATTCCCTTTAGTGCTACAATGAGTCTTCAGCATAAATCTGGAGATGAATGCAATCAGGAACAGGAAGATGAACCTATTCCAACAAAAGTTTTGCCTGCAACTGGAATCCTTCATGGAAACGAAAATGATACTGTTTTTGAAGTTCCAAATGTAATTGGTGAGTCAGAGTCTAAAAGAACGGAAGTTCCTCAAGTGAGAGAACCAAATGCTACTGATGACAAAGCTGTGGAACATACTGTTAATGGTTGTGTGATAGAGGTATCAAGTGATGAAACAATGGGATCTGATAATGATATCTCAGAAAGTTCTAGTCTGAAAGAAACCAATGGTTGTATGAGGTGCAAAAAGGATGGTAAATTGCTGGTTTGTAGAACAACCACTTGTTCAACCATGATTCATGCAAGCTGTCTGACAACATCTCCTCATTTTGATGCAGAAGGGGACTTTTTCTGCCCATATTGTGTATATGCAAAATCTATTTCAATATATATTGAAGCTAAGACAAAGTTTTTCTTGGCAAGACAAGGACTAGAGAGGTTCATTTGCAATGATGTATGGAAGGTATCATAA 1503 0.3965 MAWLRLDNRCDSESVASLPWLWSIQHAASCKEMDVTTLQSLVDVALVGEDGFCEKTRELISLRCLEAMFDPDSAHRVDCDDAAATSLDSRVRFAFSTTCGDVLRQIVGEVPVSNIIKDRVKLLKWDVSQFILHKRAVLKCDLVQLKESILDGTHPNADCLREAGRLQPQNGGCQVHLNGNAHCDLSKKDNGNCTYHANKEVKENSITTMLEKVTKQWKELLEKIKSCKRNQVESVNGNEHMTDCQQGKQVDISEWHVFQGSAKKIRHNESLNVESNKEKPISHGVGRYDRWFASKQLDSRSHNEVLHHEPQIPFSATMSLQHKSGDECNQEQEDEPIPTKVLPATGILHGNENDTVFEVPNVIGESESKRTEVPQVREPNATDDKAVEHTVNGCVIEVSSDETMGSDNDISESSSLKETNGCMRCKKDGKLLVCRTTTCSTMIHASCLTTSPHFDAEGDFFCPYCVYAKSISIYIEAKTKFFLARQGLERFICNDVWKVS 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04292 500 ProSiteProfiles Zinc finger PHD-type profile. 419 468 IPR019787 -
Arst4g04292 500 SUPERFAMILY FYVE/PHD zinc finger 416 470 IPR011011 -
Arst4g04292 500 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 397 477 IPR013083 -
Arst4g04292 500 Coils Coil 210 230 - -
Arst4g04292 500 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 19 496 - -
Arst4g04292 500 SMART PHD_3 421 466 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04292 Arst-Chr4 121001125 121003664 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04292 395 467 PHD Transcription Factor Family AT5G12400 30.137 2.63e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04292 - - adu:107486924 1032.71