Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04287 ATGGCTCTGCAGAACATTGGTGCCGCAAATAGCGATGATGCCTTCTACAGGTATAAGATGCCTAAAATGATAACCAAGATTGAGGGCAGAGGTAATGGCATCAAAACCAATATTGTCAATATGGTTGACATTGCAAAAGCGTTGGCTAGGCCGGCATCTTACACCACCAAATATTTCGGTTGTGAGCTTGGAGCACAATCGAAATTCGATGAGAAAACCGGCACTTCTCATGTTAATGGAGCACATGATACTGCAAAACTTGCGGGCCTTCTTGAGAACTTCATTAAGAAATATGTCCAATGCTACGGTTGTGGAAATCCTGAAACTGATATTTTGATTACAAAGAGTCAAATGATCCAGCTGAAATGTGCTGCTTGTGGTTTTGTGTCTGATGTGGACATGAGGGACAAGCTGACTACCTTTATCATCAAGAACCCTCCCGAAGCAAAGAAAGGATCGAAAGACAAAAAGGCCATGAGGAGAGCTGAGAAGGAGAGGATGAAGGAAGGTGAAATGGCTGATGAGGAACAGAAGAAACTGAAGAAAGAGGTTAAGAAGAAAGGCTCTTCATCATCAAAGGATGGCACTGTAAAATCTAGTAAGAAGAAAGCAGGTAGCTCTGATGAGGAACGTGTATCTCCTACACACAGTCAAATTGATGAGAAAGAGGAGGCTCGTGATGAAGATGATGATGTTCAGTGGCAAACGGATACATCTATTGATGCTGCTCGTCAACGTATCCAAGAACAGTTAAGTGCTGTGACTGCTGATATGGTCATGCTCTCAACAAATGAGCCAGAGAAGAAGAAGAAGACAGAAAGCAAGGGTTCTGAGAATGGTGACACTGTGAACTATGCAACTGTGGTCAGGGAAGTGAAAGCATATTTGAAGAAAGGTGTTGCAGCGAAGGAATTGCAGTCACATATTGCTGCATTTCCTGTATCTGCTCAGGAGAAGATGAATGCACTTCTTGAAGGATTATTTGATGGCGTCGAGAAAGGGTTTGGAAAAGAAGCTACCAAGAGGAAGAATCACCTTGCTGCTGCAGTTGCTGGAGATGACGAGGGATCGCAGCTGTTATTGCTCAATGCTGTTGAGGAGTTCTGTTACAAGAAAGGTAGCAATGCATTGAAGGAGGTTGCCCTTATTCTGAAAGCCCTCTATGATGTTGATTTGGTGGAGGAAGAGCACGTCGTCCATTGTCAGAATCGGAGGAAGAATGAGAATAGTTTGTGCTCAGTTCAGAATATTGAAGATTATGATATCACATTTACTTACTGTTATTGTCCTCAGTTTGTTGATTTTCTTTACTGTTGTGTCCTTTTATTTTGA 1332 0.4242 MALQNIGAANSDDAFYRYKMPKMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTAKLAGLLENFIKKYVQCYGCGNPETDILITKSQMIQLKCAACGFVSDVDMRDKLTTFIIKNPPEAKKGSKDKKAMRRAEKERMKEGEMADEEQKKLKKEVKKKGSSSSKDGTVKSSKKKAGSSDEERVSPTHSQIDEKEEARDEDDDVQWQTDTSIDAARQRIQEQLSAVTADMVMLSTNEPEKKKKTESKGSENGDTVNYATVVREVKAYLKKGVAAKELQSHIAAFPVSAQEKMNALLEGLFDGVEKGFGKEATKRKNHLAAAVAGDDEGSQLLLLNAVEEFCYKKGSNALKEVALILKALYDVDLVEEEHVVHCQNRRKNENSLCSVQNIEDYDITFTYCYCPQFVDFLYCCVLLF 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04287 443 FunFam Eukaryotic translation initiation factor 5 105 145 - -
Arst4g04287 443 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Arst4g04287 443 Gene3D - 2 104 - -
Arst4g04287 443 Gene3D - 105 145 - -
Arst4g04287 443 SUPERFAMILY ARM repeat 284 399 IPR016024 -
Arst4g04287 443 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Arst4g04287 443 MobiDBLite consensus disorder prediction 148 223 - -
Arst4g04287 443 FunFam Eukaryotic translation initiation factor 5 1 104 - -
Arst4g04287 443 Coils Coil 159 179 - -
Arst4g04287 443 Gene3D - 272 415 - -
Arst4g04287 443 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 409 IPR045196 GO:0003743|GO:0006413
Arst4g04287 443 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 11 101 IPR016189 GO:0003743|GO:0006413
Arst4g04287 443 ProSiteProfiles W2 domain profile. 275 443 IPR003307 GO:0005515
Arst4g04287 443 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Arst4g04287 443 MobiDBLite consensus disorder prediction 146 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04287 Arst-Chr4 120953885 120956445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04287 1 399 Eukaryotic Initiation Factors Gene Family AT1G77840 63.480 6.96e-168 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04287 K03262 - gmx:100777906 596.275