Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04286 ATGGAATCGTTATCTCCTAATAATATATTCGTACAATGCCGAATATGTCACAATGAAGATGAAGAGTCACACATGGAAACACCATGTTCATGTTCTGGCACCCTCAAGTACGTACATAGAAATTGTGTTCAAAGATGGTGCAATGAGAAAGGCGATACTACCTGTGAGATTTGCCTAAAGCAATTTACACCCGGCTACACTGTACCCCCACCACCTACTTCCTCATTCCATGATGGTGGATCTCCAATAAATTTCGGATGGAACTATTGGGAGACTTCAAGAAGAGTTCACAATAGCAATAATCAGTTTGTATCAATGTTTGGTGCTGATAATCATGAACCTGACATTGAATATTCAACACCATCTACAAGGTCCATGATATGCTGCCGCATAGTTGCCACTATTTTTCTTGGTCTTATTGTTTTAAGGCATACGCTTCAAGTTATACTGATACTCAGTGAAACAGAAGAGTATTCGTTGACAGTGTTTATGCTATTACTGTTGGGAATCCTTGGGATATTGATTTCGATACATACGATGATCAAAGCTAACTACTACGGCCCAAGGACTTCAATACCAGATTCATCATTCCCTTATTTCATCACGTGA 609 0.3924 MESLSPNNIFVQCRICHNEDEESHMETPCSCSGTLKYVHRNCVQRWCNEKGDTTCEICLKQFTPGYTVPPPPTSSFHDGGSPINFGWNYWETSRRVHNSNNQFVSMFGADNHEPDIEYSTPSTRSMICCRIVATIFLGLIVLRHTLQVILILSETEEYSLTVFMLLLLGILGILISIHTMIKANYYGPRTSIPDSSFPYFIT 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04286 202 SUPERFAMILY RING/U-box 11 62 - -
Arst4g04286 202 CDD RING_CH-C4HC3_MARCH 13 58 - -
Arst4g04286 202 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 7 184 IPR033275 -
Arst4g04286 202 Pfam Protein of unknown function (DUF3675) 64 183 IPR022143 -
Arst4g04286 202 ProSiteProfiles Zinc finger RING-CH-type profile. 5 65 IPR011016 GO:0008270
Arst4g04286 202 FunFam Zinc finger family protein 2 68 - -
Arst4g04286 202 Pfam RING-variant domain 13 58 IPR011016 GO:0008270
Arst4g04286 202 SMART ringv_2 12 59 IPR011016 GO:0008270
Arst4g04286 202 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 5 67 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04286 Arst-Chr4 120951432 120953712 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04286 12 58 C3H Transcription Factor Family AT2G37950 48.000 1.77e-07 47.8