Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04271 ATGGCAGAAGGTGAGGATATTCAGCCTCTTGTCTGTGACAATGGAACTGGAATGGTTAAGGCTGGTTTTGCTGGAGACGACGCCCCACGAGCTGTTTTTCCCAGCATTGTAGGCCGCCCTCGCCACACTGGTGTGATGGTAGGAATGGGCCAGAAAGATGCATATGTTGGAGATGAGGCACAATCCAAGAGGGGTATCTTGACTCTCAAGTATCCAATTGAGCATGGTATTGTAAGCAATTGGGATGATATGGAGAAGATTTGGCATCACACATTCTACAATGAGCTTCGAGTTGCCCCTGAAGAGCATCCAGTTTTGCTGACTGAGGCTCCTCTTAACCCGAAAGCTAATCGTGAGAAGATGACTCAAATCATGTTTGAGACCTTCAATGCCCCTGCCATGTATGTAGCCATTCAGGCTGTTCTTTCATTGTATGCTAGTGGTCGCACAACCGGTATTGTGTTGGATTCAGGGGATGGTGTCAGCCACACTGTCCCTATCTATGAGGGTTATGCTCTGCCACATGCCATCCTTAGGCTTGATCTCGCCGGTCGTGACCTCACAGATTTCTTGATGAAAATCTTGACTGAGCGTGGTTACTCATTTACCACCTCAGCAGAGCGAGAAATCGTGAGGGATGTGAAAGAGAAGCTGTCCTACATTGCCCTTGACTATGAGCAAGAGCTGCAGACAGCCAAGACCAGCTCCTCTGTGGAGAAGAGCTATGAGTTGCCAGATGGACAAGTGATTACCATCGGCGACGAACGTTTCAGATGTCCTGAGGTGCTTTTCCAACCATCCATGATAGGAATGGAAGCTGCAGGTATCCACGAGACGACATACAACTCGATCATGAAGTGCGATGTTGATATCAGGAAGGACTTGTATGGCAACATTGTTCTATCAGGAGGAACAACTATGTTCCCGGGCATCGCCGATAGAATGAGCAAGGAAATCTCTGCATTGGCTCCCAGCAGCATGAAGATCAAGGTGGTGGCTCCCCCTGAGAGAAAATATAGTGTCTGGATTGGTGGTTCTATCTTGGCATCCCTCAGCACTTTCCAGCAGATGTGGATTGCAAAGGCAGAATATGATGAGTCTGGACCATCAATTGTGCACAGAAAATGCTTCTAA 1134 0.4797 MAEGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDFLMKILTERGYSFTTSAEREIVRDVKEKLSYIALDYEQELQTAKTSSSVEKSYELPDGQVITIGDERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEISALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04271 377 Pfam Actin 5 377 IPR004000 -
Arst4g04271 377 SUPERFAMILY Actin-like ATPase domain 149 377 IPR043129 -
Arst4g04271 377 Gene3D - 10 371 - -
Arst4g04271 377 FunFam Actin, alpha skeletal muscle 331 377 - -
Arst4g04271 377 ProSitePatterns Actins signature 2. 358 366 IPR004001 -
Arst4g04271 377 SUPERFAMILY Actin-like ATPase domain 6 155 IPR043129 -
Arst4g04271 377 Gene3D - 140 340 - -
Arst4g04271 377 FunFam Actin, alpha skeletal muscle 3 164 - -
Arst4g04271 377 Gene3D Actin; Chain A, domain 4 182 273 - -
Arst4g04271 377 ProSitePatterns Actins signature 1. 55 65 IPR004001 -
Arst4g04271 377 FunFam Actin, muscle 182 273 - -
Arst4g04271 377 CDD NBD_sugar-kinase_HSP70_actin 10 183 - -
Arst4g04271 377 PANTHER ACTIN 9 370 IPR004000 -
Arst4g04271 377 ProSitePatterns Actins and actin-related proteins signature. 106 118 IPR020902 -
Arst4g04271 377 PRINTS Actin signature 51 62 IPR004000 -
Arst4g04271 377 PRINTS Actin signature 63 85 IPR004000 -
Arst4g04271 377 PRINTS Actin signature 142 161 IPR004000 -
Arst4g04271 377 PRINTS Actin signature 238 254 IPR004000 -
Arst4g04271 377 PRINTS Actin signature 28 37 IPR004000 -
Arst4g04271 377 PRINTS Actin signature 117 130 IPR004000 -
Arst4g04271 377 SMART actin_3 7 377 IPR004000 -
Arst4g04271 377 FunFam Actin, alpha skeletal muscle 257 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04271 Arst-Chr4 120824701 120827265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04271 1 377 Cytoskeleton Gene Families AT3G12110 97.082 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04271 K10355 - gmx:100792119 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g04271 4 120824701 120827265 Arst4g04271 4 120824701 120827265 ECH
Arst5g02856 5 83945670 83948482 Arst4g04271 4 120824701 120827265 PCT