Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04250 ATGATTGGTAGGAAATTTGCTGACCCCAATATTCAGAAAGATAAAGTATTGTGGCCATTCAAAGTCATTTCTGGTGCTAATGGCGAACCAATTGTTTCTGTTAAGTACAAGGATCAGGAGAGACGCCTTTGTCCTGAAGAAATTTCAGCCATGGTTCTGACAAAGATGCGTGAGACTGCAGAGGCATATTTAGATTCACCTGTGGAGTATGCAGTCATTACTGTCCCGGCCTACTTCAGTGACTCGCAGCGCAAAGCCACCAGAGATGCCGGTGCCATTGCTGGTCTCACTGTCATGAGGTTAATCAATGAACCTACTGCTGCAGCTATTGCTTATGGCCTTGATAAGCGAGCTGGTAACTGTTCTGCAGAAAGGAATGTTTTGATCTTCGACCTTGGAGGTGGTACTTTTGATGTAACCCTCCTTACCATCAAGGATAAGTTGTTTGAAGTTAAGGCCGCATGTGGAAACACTCATCTTGGTGGGGAAGACTTTGATGACAGAATGTTGAAATACTTTATAGAAGAGTTTGAAAAGAAGAACAAAGTTGACATAAGTGGTGATTCAAGAGCCTTGAGGAGGTTGAGAAACGAATGCGAAAGGGCGAAAAGGACACTCTCAAGCTCCATTGATGCGTTCATTGACATAGATTGTTTATTTAAGGGTATTGACTTCTCTTCATCTATTACTCAAGCTAAGTTTGAGGAACTTAACAAGGACCTCTTTGAAGAGTGTATTGAGATAGTAAAAGAATGTGTTACCAATGCTGGTATAGACAAGAGGTGTATACATGAGGTTGTCCTTGTTGGTGGATCTTCTAGGATTCCAAAAGTGCAACAACTACTGCAGGAATTCTTCCAAGGGAAAAATCTGTTCAAGGCACTTAATCCTGATGAAGCTGTTGCTTATGGAGCCGCCCTTCAGGCTGCTTTGTTAAGTGAAGGCTTTAAGAATGTTCCAAATGTGGTGGTGTGCGATGTTACTCCGTTGTCACTTGGTATATGTGAAAAAGTAGATATTATGAGCATAGAAATTCCTAGGAATTCTAGTATTCCTATAAAGAAGAAAACTAAATACGGCACAGTTGTGGATAACCAATCTTTTGCACGTGTTTTTGTTTATGAAGGTGAGAGGGCAAGAGCTAGTGATAACAACTTGCTGGGCCGATTTGTGCTTTCTGGTATTCCTCCTGCTCCTCGAGGCCATCCTATTATGATATGCTTCAATATAGACGAAGATGGTATCTTAAATGTATCTGCTGAAGAAGAAACTACTGGTAAAAGCAACGAGATTACCATAACCAATGATAAAGGGCGAATGTCGGCTAAGGAAATTGCAAGATTAATTCAGGAAGCTAAAATTTATGAGGCTGAAGACAGAGAATTTCTTGAGAAGGATGGAGCAATGAATGATTTGGATGACTATGTTTACAAAATGAGAAAAGCTTTAGAAGATATTGAAATGGACAAGGAAAAGATCGGTGATGCAATTGTTAAGGCCAAGAGTTTGCTTGATGATCACAAAGAGCAGCATAAAAAAGATGTGTTCGAGAAGAATATGAAGGATCTTGAGTTATATTCTGAATCACTAAATGCAAATCTGAAGAATATGATATTATCTTATACTATATTTTGA 1635 0.3963 MIGRKFADPNIQKDKVLWPFKVISGANGEPIVSVKYKDQERRLCPEEISAMVLTKMRETAEAYLDSPVEYAVITVPAYFSDSQRKATRDAGAIAGLTVMRLINEPTAAAIAYGLDKRAGNCSAERNVLIFDLGGGTFDVTLLTIKDKLFEVKAACGNTHLGGEDFDDRMLKYFIEEFEKKNKVDISGDSRALRRLRNECERAKRTLSSSIDAFIDIDCLFKGIDFSSSITQAKFEELNKDLFEECIEIVKECVTNAGIDKRCIHEVVLVGGSSRIPKVQQLLQEFFQGKNLFKALNPDEAVAYGAALQAALLSEGFKNVPNVVVCDVTPLSLGICEKVDIMSIEIPRNSSIPIKKKTKYGTVVDNQSFARVFVYEGERARASDNNLLGRFVLSGIPPAPRGHPIMICFNIDEDGILNVSAEEETTGKSNEITITNDKGRMSAKEIARLIQEAKIYEAEDREFLEKDGAMNDLDDYVYKMRKALEDIEMDKEKIGDAIVKAKSLLDDHKEQHKKDVFEKNMKDLELYSESLNANLKNMILSYTIF 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04250 544 Coils Coil 185 212 - -
Arst4g04250 544 Gene3D - 52 310 - -
Arst4g04250 544 Gene3D - 470 534 IPR029048 -
Arst4g04250 544 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 317 469 IPR029047 -
Arst4g04250 544 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 318 472 IPR029047 -
Arst4g04250 544 SUPERFAMILY Actin-like ATPase domain 1 116 IPR043129 -
Arst4g04250 544 Gene3D - 1 51 - -
Arst4g04250 544 Gene3D - 117 292 - -
Arst4g04250 544 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 468 526 IPR029048 -
Arst4g04250 544 ProSitePatterns Heat shock hsp70 proteins family signature 3. 266 280 IPR018181 -
Arst4g04250 544 PRINTS 70kDa heat shock protein signature 263 279 - -
Arst4g04250 544 PRINTS 70kDa heat shock protein signature 321 340 - -
Arst4g04250 544 PRINTS 70kDa heat shock protein signature 135 145 - -
Arst4g04250 544 PRINTS 70kDa heat shock protein signature 295 315 - -
Arst4g04250 544 PRINTS 70kDa heat shock protein signature 71 91 - -
Arst4g04250 544 PRINTS 70kDa heat shock protein signature 401 417 - -
Arst4g04250 544 PANTHER HEAT SHOCK PROTEIN 70KDA 1 497 IPR013126 GO:0005524|GO:0140662
Arst4g04250 544 ProSitePatterns Heat shock hsp70 proteins family signature 2. 129 142 IPR018181 -
Arst4g04250 544 Pfam Hsp70 protein 1 532 IPR013126 GO:0005524|GO:0140662
Arst4g04250 544 Gene3D Actin; Chain A, domain 4 161 244 - -
Arst4g04250 544 FunFam Heat shock 70 kDa 161 244 - -
Arst4g04250 544 FunFam heat shock 70 kDa protein-like 1 51 - -
Arst4g04250 544 SUPERFAMILY Actin-like ATPase domain 123 313 IPR043129 -
Arst4g04250 544 FunFam Heat shock 70 kDa protein 315 468 - -
Arst4g04250 544 FunFam Endoplasmic reticulum chaperone BiP 12 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04250 Arst-Chr4 120580667 120615614 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04250 1 524 Calmodulin-binding Proteins AT3G12580 59.662 0.0 646