Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04232 GTTGGAAGGCAAATGTTGCAAGGGAGTGTTGTTCCTGGTGTTGGACTGGTTATGGGTCACGGAGCTGGAGTTGGAGCTGAACCTGACACTGAAACCAAACTCTATATTTCTAACTTGGATTATGGTGTTTCCAACGAAGATATTAAGCTGCTGTTTGCAGAAGAGGGCGAGTTAAAGAGATACTCCATACATTATGACAAGAGTGGAAGATCAAAGGGGACAGCAGAAGTTGTCTTTGTGAGGAAGTCTGATGCTCTAGCAGCCATGAAGAAATACAACAACATGAAGCTTGATGGGAAACCATTGCAAATTGAGCTTGTTGGAACTACCGTCGTACCAGCTCCTGATGTTATACCTGTTGTTCAAAATAGCATATTGGGAAAACCAAGTAACTTCTTTGTATGTGGACAAGGAACGGTCGACGATAGAAGTTTCCAGAATGGCATTTTAGGTGACTACCATCGAACAATCCAGAATGGCATTTTAGGCGACTACCATCGAAGGGGCCTTAGTGACAGGATTGGAGGGAAGATCCCTATTGGAAGGAGGGTGTCTTCTAGAGATCTTGATGATGATTTGGAGAGGTATAACCAACGTCCAAGAGGTGGTCCAAGAGGCAGAGGCCGCAGAGAAAGAGAAACAAGGGACCAAAATAATGGAAAGCTATCTCGTAAAGATCTTGATGACGACTTGGAGCGGTATCGCATGGAGGCTATGCAACTAAAAAAGAAAAATCCAAACTGA 744 0.4395 MAAGMDMSLDEVIKKSAAESAARRRPRYPLSGLGPDRRIPNRVSATMTPYPVPQVGRQMLQGSVVPGVGLVMGHGAGVGAEPDTETKLYISNLDYGVSNEDIKLLFAEEGELKRYSIHYDKSGRSKGTAEVVFVRKSDALAAMKKYNNMKLDGKPLQIELVGTTVVPAPDVIPVVQNSILGKPSNFFVCGQGTVDDRSFQNGILGDYHRTIQNGILGDYHRRGLSDRIGGKIPIGRRVSSRDLDDDLERYNQRPRGGPRGRGRRERETRDQNNGKLSRKDLDDDLERYRMEAMQLKKKNPN 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04232 301 CDD RRM_THOC4 86 160 - -
Arst4g04232 301 SMART rrm1_1 87 159 IPR000504 GO:0003723
Arst4g04232 301 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 88 156 IPR000504 GO:0003723
Arst4g04232 301 MobiDBLite consensus disorder prediction 18 42 - -
Arst4g04232 301 Gene3D - 79 162 IPR012677 -
Arst4g04232 301 Coils Coil 278 301 - -
Arst4g04232 301 MobiDBLite consensus disorder prediction 243 285 - -
Arst4g04232 301 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 86 163 IPR000504 GO:0003723
Arst4g04232 301 PANTHER RNA AND EXPORT FACTOR BINDING PROTEIN 5 293 - -
Arst4g04232 301 SUPERFAMILY RNA-binding domain, RBD 55 161 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04232 Arst-Chr4 120449782 120451556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04232 88 161 Eukaryotic Initiation Factors Gene Family AT2G23350 37.838 1.51e-08 53.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst4g04232 4 120449782 120451556 Arst4g04232 4 120449782 120451556 ECH