Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04228 GGAACAACGTACTCCTGTGTTGCAGTGTGGCGCCATGATCGAGTGGAGATCATAACGAACGACGAAGGGAACAGAATAACACCTTCTTGTGTTGCATTCACTGATACTCAAAGAATGATTGGAGATGCTGCTAAGAATCAAATTGCTTCCAACCCTACCAACACTGTCTTTGACTCAAAGAGGTTAATTGGTAGAAAGTTCAGTGACCCTCATGTCCAGAATGACATAAAACTCTGGCCATTTCAAGTCACTAATGTTGATGACGTTCCAAAAATTGTTGAGTACAAAAGTGAGAAAAAGTTATTCGCTGCCGAAGAAATTTCATCCATGATCTTAGCAAAGATGCGCGAAATCGCAGAGAAATTTCTTGGAACACAAGTAACGAATGCAGTTATTACGGTGCCTGCTTATTTCAACGACTCTCAGCGGCAAGCCACCAAAGATGCCGGCCATATCGCCGGCCTGAACGTAATGAGCATACTCAACGAGCCAAGTGCGGCAGCAATTGCTTACGGCCTCGACACTAAAGATCATTTTCATGGAATCAGAACTGTCTTCGTCTTTGATTTTGGCGGTGGTACTTTGGATCTTACTCTTCTCACAATTGACAACAAAGGGAACATAACCGTCAAGATCCATGGCGGAGACACGCATCTCGGTGGACAGGATTTTGACGCTGCAATGGTTGAATTCTTTGCGAGTGAGTTTCAGAGAAAGAAAAAGATCGATCTCAGAGGAAACAAAAGAGCCATATGCAGGTTGAAGGTTGCTTGCGAGAGAGCGAAGAGGAATCTCTCTTCAACAACTAAAGCTTCCATTGAGCTGGAATCTCTTCATGAGGGAATCGATTTCTACACATCAATCACTCGCGCTAAGTTCGAGGAAATCAACAAGAATCTCTTTGAGAGGTGCATGGAGCTTGTGCATAAGTGTTTCGAGGATAGTGACATGGCGAAAAGCAGCGTTGATGAGGTTGTGCTCGTTGGTGGCTCGACTAGGATTCCGAAATTGGAGCAGCGGTTGAAGGACTTCTTCGACGGGAAGGATCTTTGCAAGAAGTGCATCAATGCGGACGAGGCGGTTGCATATGGTGCTGCAATCCATGCTTCAAAACTGAGTGGTCACAAAAATGAAAAGATTCAAGATCTGACGCTCTGGGAAGTTACTCCTCTGTCCCTGGGCTTGAAAGAGCAAGGAGGTTTAATGAAAGTTATAATTCCAAGGAACACGATGATTCCTACAAAGAAGCAAGATCTGTTTACAACACAATTCCACAACCAAGAAATAGTCCAGATTCATATCTACGAGGGCGAGAGGAAAATTGCAAGCAACAACAACTTGCTGGGAAGTTTCGATCTGGAAATTCCTCCGGCACCGCGCGGCGTGCCGATGATTAATGTGTGCTTTGAAATAGATTCTAACAGTATCTTACATGTATCGGCGGAGGAAAGAGCAACGGGGGTGATGAAGAAGGTGTCTGTAGTGAGCAACAAAGGAAGATTGTCGAGAGAAGAAGTTGAGAGGATGGTGAAAGATGCTGAGAAGTACAAGGCTGAAGATGAAGAGCAGAGGCAGAAGGTTGAAGCAAGGAATGCTTTGGAGAATCTTGCTTACAATATGAGGAATTTGATAGAAGATGAACCCGTTGCTTCTGAGCTATCTGCAGAAGACAAGAAAAAGATTAACAAAGCTATTGATTATACATTGAAATGGATTGATGAGAGTGATTTTGCAACGGTGGATGAGTTTAAGAAGGAAGAGGAAGGTCTTTTGAGTGTGTTTCGTCCAATTATTTTGAAGATGATTGAAGATCTTGATGCTCGTGGTAGTGAAAGTGGAAGAAAAAGCTTGAAGAAACACAATTTTGAGGTAGTAGTCAGCGTTGTCACAGGGTTGGTTTCTGCTGTGTGTTCTGTTATCCAAGTAATTCAAAACATACTTTGA 1944 0.4331 MIGMVVAADESANNLGTVIGIDLGTTYSCVAVWRHDRVEIITNDEGNRITPSCVAFTDTQRMIGDAAKNQIASNPTNTVFDSKRLIGRKFSDPHVQNDIKLWPFQVTNVDDVPKIVEYKSEKKLFAAEEISSMILAKMREIAEKFLGTQVTNAVITVPAYFNDSQRQATKDAGHIAGLNVMSILNEPSAAAIAYGLDTKDHFHGIRTVFVFDFGGGTLDLTLLTIDNKGNITVKIHGGDTHLGGQDFDAAMVEFFASEFQRKKKIDLRGNKRAICRLKVACERAKRNLSSTTKASIELESLHEGIDFYTSITRAKFEEINKNLFERCMELVHKCFEDSDMAKSSVDEVVLVGGSTRIPKLEQRLKDFFDGKDLCKKCINADEAVAYGAAIHASKLSGHKNEKIQDLTLWEVTPLSLGLKEQGGLMKVIIPRNTMIPTKKQDLFTTQFHNQEIVQIHIYEGERKIASNNNLLGSFDLEIPPAPRGVPMINVCFEIDSNSILHVSAEERATGVMKKVSVVSNKGRLSREEVERMVKDAEKYKAEDEEQRQKVEARNALENLAYNMRNLIEDEPVASELSAEDKKKINKAIDYTLKWIDESDFATVDEFKKEEEGLLSVFRPIILKMIEDLDARGSESGRKSLKKHNFEVVVSVVTGLVSAVCSVIQVIQNIL 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04228 670 FunFam Heat shock 70 kDa 243 326 - -
Arst4g04228 670 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 401 557 IPR029047 -
Arst4g04228 670 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 400 552 IPR029047 -
Arst4g04228 670 Gene3D - 199 374 - -
Arst4g04228 670 FunFam Heat shock protein 70 19 204 - -
Arst4g04228 670 Coils Coil 526 569 - -
Arst4g04228 670 ProSitePatterns Heat shock hsp70 proteins family signature 1. 21 28 IPR018181 -
Arst4g04228 670 ProSitePatterns Heat shock hsp70 proteins family signature 2. 210 223 IPR018181 -
Arst4g04228 670 SUPERFAMILY Actin-like ATPase domain 207 394 IPR043129 -
Arst4g04228 670 FunFam heat shock 70 kDa protein-like 80 133 - -
Arst4g04228 670 Gene3D - 19 392 - -
Arst4g04228 670 ProSitePatterns Heat shock hsp70 proteins family signature 3. 348 362 IPR018181 -
Arst4g04228 670 Pfam Hsp70 protein 18 624 IPR013126 GO:0005524|GO:0140662
Arst4g04228 670 Gene3D Actin; Chain A, domain 4 244 326 - -
Arst4g04228 670 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 551 629 IPR029048 -
Arst4g04228 670 Gene3D - 80 133 - -
Arst4g04228 670 PANTHER HEAT SHOCK PROTEIN 70KDA 18 588 IPR013126 GO:0005524|GO:0140662
Arst4g04228 670 FunFam Heat shock 70 kDa 400 553 - -
Arst4g04228 670 SUPERFAMILY Actin-like ATPase domain 16 198 IPR043129 -
Arst4g04228 670 PRINTS 70kDa heat shock protein signature 45 57 - -
Arst4g04228 670 PRINTS 70kDa heat shock protein signature 153 173 - -
Arst4g04228 670 PRINTS 70kDa heat shock protein signature 17 30 - -
Arst4g04228 670 PRINTS 70kDa heat shock protein signature 216 226 - -
Arst4g04228 670 PRINTS 70kDa heat shock protein signature 485 501 - -
Arst4g04228 670 PRINTS 70kDa heat shock protein signature 405 424 - -
Arst4g04228 670 PRINTS 70kDa heat shock protein signature 67 75 - -
Arst4g04228 670 PRINTS 70kDa heat shock protein signature 345 361 - -
Arst4g04228 670 PRINTS 70kDa heat shock protein signature 378 398 - -
Arst4g04228 670 Gene3D - 553 626 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04228 Arst-Chr4 120429462 120431675 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04228 16 626 Calmodulin-binding Proteins AT3G12580 63.681 0.0 802