Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst4g04212 ATGATGAAGAGAGAAAGAGAAGTGATTGAAAGCATGACCATGGCAAATTGCTTGATGCTACTATCTAGAGGAAGTGATCAATTTAAGGCAACATATTCTTCAAGTTTTTCTTCAAATTATAACAACAACGACAACAACAACAACAACAACCGAGTTTTCGAGTGCAAAACATGTAACAGACAATTCCCTTCATTTCAAGCACTTGGAGGGCATAGAGCTAGTCACAAGAAGCCAAGGTTAATGGATGATCATGGTGGCAAATTGGAAGAACAACAACAACAACAATTGGAAGCTCAAAAGCCTAAGACTCATGAATGTTCCATTTGTGGCTTGGAATTTGCAATTGGTCAAGCATTAGGTGGACATATGAGGAGGCATAGAGCTACTTCAAATTTGAATCATCATAATGGAAGATTATTATTGCATAATAATAATAATAATAATAATAATAATAATAATAATAATTCTACTATGAGTAGTAGTAGTGGTGGTAGCACTAGCCTTGAGTCTTCATCACCAAATGGGATATCAAAGAATAATAATAGTAAGAGAGTTTTGGTTTTGGATTTGAATTTGACACCCTTTGAGAATGATTTGGAGATTTTGAAGATTGGAAATTGTTTGTGTTGA 630 0.3429 MMKREREVIESMTMANCLMLLSRGSDQFKATYSSSFSSNYNNNDNNNNNNRVFECKTCNRQFPSFQALGGHRASHKKPRLMDDHGGKLEEQQQQQLEAQKPKTHECSICGLEFAIGQALGGHMRRHRATSNLNHHNGRLLLHNNNNNNNNNNNNNSTMSSSSGGSTSLESSSPNGISKNNNSKRVLVLDLNLTPFENDLEILKIGNCLC 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst4g04212 209 ProSiteProfiles Zinc finger C2H2 type domain profile. 104 131 IPR013087 -
Arst4g04212 209 MobiDBLite consensus disorder prediction 75 90 - -
Arst4g04212 209 PANTHER ZINC FINGER PROTEIN ZAT5 10 197 - -
Arst4g04212 209 ProSiteProfiles Zinc finger C2H2 type domain profile. 53 80 IPR013087 -
Arst4g04212 209 ProSitePatterns Zinc finger C2H2 type domain signature. 55 75 IPR013087 -
Arst4g04212 209 ProSitePatterns Zinc finger C2H2 type domain signature. 106 126 IPR013087 -
Arst4g04212 209 MobiDBLite consensus disorder prediction 136 180 - -
Arst4g04212 209 MobiDBLite consensus disorder prediction 68 99 - -
Arst4g04212 209 SUPERFAMILY beta-beta-alpha zinc fingers 51 126 IPR036236 -
Arst4g04212 209 SMART c2h2final6 53 75 IPR013087 -
Arst4g04212 209 SMART c2h2final6 104 126 IPR013087 -
Arst4g04212 209 Gene3D Classic Zinc Finger 51 126 - -
Arst4g04212 209 Pfam C2H2-type zinc finger 52 78 - -
Arst4g04212 209 Pfam C2H2-type zinc finger 104 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst4g04212 Arst-Chr4 120272355 120273213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst4g04212 2 205 C2H2 Transcription Factor Family AT2G28710 39.024 5.14e-36 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst4g04212 zf-C2H2_6 1.1e-09 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst4g04212 - - adu:107486331 316.62